BLASTX nr result

ID: Dioscorea21_contig00029598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029598
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35207.3| unnamed protein product [Vitis vinifera]              197   1e-48
ref|XP_002264002.1| PREDICTED: E3 ubiquitin protein ligase DRIP2...   197   1e-48
emb|CAN82106.1| hypothetical protein VITISV_006024 [Vitis vinifera]   197   1e-48
ref|XP_002306821.1| predicted protein [Populus trichocarpa] gi|2...   189   2e-46
ref|XP_003536126.1| PREDICTED: E3 ubiquitin protein ligase DRIP2...   189   3e-46

>emb|CBI35207.3| unnamed protein product [Vitis vinifera]
          Length = 425

 Score =  197 bits (500), Expect = 1e-48
 Identities = 100/163 (61%), Positives = 124/163 (76%), Gaps = 3/163 (1%)
 Frame = +3

Query: 3   LCHKLLRDATTISMCLHTFCRKCILEKLNEE--DSCPICNIDLGCVPVEKLRPDHNLQDL 176
           LC+KLL++ATTIS+CLHTFCRKCI EKL++E  D CP+CNIDLGCVPV+KLRPDHNLQD+
Sbjct: 21  LCNKLLKEATTISLCLHTFCRKCIYEKLSDEEVDCCPVCNIDLGCVPVDKLRPDHNLQDI 80

Query: 177 RAKIFPYKRVKVEAPEVWSSVSIPVKRKERSLSSLVVTTPRIGNQTGLTGRRTK-TSRKA 353
           RAKIFP+KR K   PEV   + +PVKRKERSLSSLVV+TPR+  QTGLTGRRTK  +RK+
Sbjct: 81  RAKIFPFKRRKTSVPEVMPPIPLPVKRKERSLSSLVVSTPRVSMQTGLTGRRTKAVARKS 140

Query: 354 AGLCRLSPVISATIKKPLETVADCKDNLILSETPAKMTFIRKK 482
             L   S  I   IKK  ++V DC ++    E+  K+   +K+
Sbjct: 141 TALRGSSFSIVEPIKKEEDSVEDCPESSSSPESRNKVAQTKKQ 183


>ref|XP_002264002.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Vitis vinifera]
          Length = 449

 Score =  197 bits (500), Expect = 1e-48
 Identities = 100/163 (61%), Positives = 124/163 (76%), Gaps = 3/163 (1%)
 Frame = +3

Query: 3   LCHKLLRDATTISMCLHTFCRKCILEKLNEE--DSCPICNIDLGCVPVEKLRPDHNLQDL 176
           LC+KLL++ATTIS+CLHTFCRKCI EKL++E  D CP+CNIDLGCVPV+KLRPDHNLQD+
Sbjct: 21  LCNKLLKEATTISLCLHTFCRKCIYEKLSDEEVDCCPVCNIDLGCVPVDKLRPDHNLQDI 80

Query: 177 RAKIFPYKRVKVEAPEVWSSVSIPVKRKERSLSSLVVTTPRIGNQTGLTGRRTK-TSRKA 353
           RAKIFP+KR K   PEV   + +PVKRKERSLSSLVV+TPR+  QTGLTGRRTK  +RK+
Sbjct: 81  RAKIFPFKRRKTSVPEVMPPIPLPVKRKERSLSSLVVSTPRVSMQTGLTGRRTKAVARKS 140

Query: 354 AGLCRLSPVISATIKKPLETVADCKDNLILSETPAKMTFIRKK 482
             L   S  I   IKK  ++V DC ++    E+  K+   +K+
Sbjct: 141 TALRGSSFSIVEPIKKEEDSVEDCPESSSSPESRNKVAQTKKQ 183


>emb|CAN82106.1| hypothetical protein VITISV_006024 [Vitis vinifera]
          Length = 662

 Score =  197 bits (500), Expect = 1e-48
 Identities = 99/163 (60%), Positives = 125/163 (76%), Gaps = 3/163 (1%)
 Frame = +3

Query: 3   LCHKLLRDATTISMCLHTFCRKCILEKLNEE--DSCPICNIDLGCVPVEKLRPDHNLQDL 176
           LC+KLL++ATTIS+CLHTFCRKCI EKL++E  D CP+CNIDLGCVPV+KLRPDHNLQD+
Sbjct: 21  LCNKLLKEATTISLCLHTFCRKCIYEKLSDEEVDCCPVCNIDLGCVPVDKLRPDHNLQDI 80

Query: 177 RAKIFPYKRVKVEAPEVWSSVSIPVKRKERSLSSLVVTTPRIGNQTGLTGRRTK-TSRKA 353
           RAKIFP+KR K+  P+V   + +PVKRKERSLSSLVV+TPR+  QTGLTGRRTK  +RK+
Sbjct: 81  RAKIFPFKRRKISVPQVMPPIPLPVKRKERSLSSLVVSTPRVSMQTGLTGRRTKAVARKS 140

Query: 354 AGLCRLSPVISATIKKPLETVADCKDNLILSETPAKMTFIRKK 482
             L   S  I   IKK  ++V DC ++    E+  K+   +K+
Sbjct: 141 TALRGSSFSIVEPIKKEEDSVEDCPESSSSPESRNKVAQTKKQ 183


>ref|XP_002306821.1| predicted protein [Populus trichocarpa] gi|222856270|gb|EEE93817.1|
           predicted protein [Populus trichocarpa]
          Length = 436

 Score =  189 bits (481), Expect = 2e-46
 Identities = 100/157 (63%), Positives = 120/157 (76%), Gaps = 4/157 (2%)
 Frame = +3

Query: 3   LCHKLLRDATTISMCLHTFCRKCILEKLNEE--DSCPICNIDLGCVPVEKLRPDHNLQDL 176
           LC+KLLRDATTIS CLHTFCRKCI +++++E  DSCPICNI+LGC+P+EKLRPDHNLQD+
Sbjct: 26  LCNKLLRDATTISECLHTFCRKCIYQRISDEGLDSCPICNINLGCIPLEKLRPDHNLQDV 85

Query: 177 RAKIFPYKRVKVEAPEVWSSVSIPV-KRKERSLSSLVVTTPRIGNQTGLTGRRTKT-SRK 350
           R+KIFPYKR KVEAPEV  SV++PV +RKERSLSSLVV+TP++  QT  TGRRTK   RK
Sbjct: 86  RSKIFPYKRRKVEAPEVVESVTLPVIRRKERSLSSLVVSTPKVSTQTTTTGRRTKPFPRK 145

Query: 351 AAGLCRLSPVISATIKKPLETVADCKDNLILSETPAK 461
           AA L      I   IKK  +   D  ++    ETP K
Sbjct: 146 AAALRGSGFSIEKPIKKEHDRAEDSPESSSSPETPKK 182


>ref|XP_003536126.1| PREDICTED: E3 ubiquitin protein ligase DRIP2-like [Glycine max]
          Length = 450

 Score =  189 bits (479), Expect = 3e-46
 Identities = 96/154 (62%), Positives = 117/154 (75%), Gaps = 3/154 (1%)
 Frame = +3

Query: 3   LCHKLLRDATTISMCLHTFCRKCILEKLNEE--DSCPICNIDLGCVPVEKLRPDHNLQDL 176
           LCH   +DATTIS CLHTFCRKCI EKL++E  D CP+CNIDLGC+PVEKLRPDHNL D+
Sbjct: 22  LCHNFFKDATTISTCLHTFCRKCIYEKLSDEETDCCPVCNIDLGCLPVEKLRPDHNLHDI 81

Query: 177 RAKIFPYKRVKVEAPEVWSSVSIPVKRKERSLSSLVVTTPRIGNQTGLTGRRTKTS-RKA 353
           RAKIFP+KR K++A EV SS+S+P KRKERSLSSLVV+ P++  Q G TG+RTK S RKA
Sbjct: 82  RAKIFPFKRKKIKAQEVLSSISLPAKRKERSLSSLVVSAPKVSMQPGFTGKRTKNSTRKA 141

Query: 354 AGLCRLSPVISATIKKPLETVADCKDNLILSETP 455
           A L   S ++  +IKK     A+  DN++ S  P
Sbjct: 142 AALRGCSFLLDESIKK---EQANGDDNMVCSILP 172


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