BLASTX nr result

ID: Dioscorea21_contig00029587 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029587
         (617 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002455675.1| hypothetical protein SORBIDRAFT_03g020131 [S...   290   2e-76
gb|AFA27402.1| photosystem II CP47 chlorophyll apoprotein, parti...   286   2e-75
gb|AEX95748.1| photosystem II CP47 chlorophyll apoprotein (chlor...   286   2e-75
gb|AEX95747.1| photosystem II CP47 chlorophyll apoprotein (chlor...   286   2e-75
gb|AEX95746.1| photosystem II CP47 chlorophyll apoprotein (chlor...   286   2e-75

>ref|XP_002455675.1| hypothetical protein SORBIDRAFT_03g020131 [Sorghum bicolor]
           gi|241927650|gb|EES00795.1| hypothetical protein
           SORBIDRAFT_03g020131 [Sorghum bicolor]
          Length = 181

 Score =  290 bits (741), Expect = 2e-76
 Identities = 137/157 (87%), Positives = 139/157 (88%)
 Frame = -3

Query: 471 RGISMGLPWYRVHTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMW 292
           RGISMGLPWYRVHTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMW
Sbjct: 1   RGISMGLPWYRVHTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMW 60

Query: 291 RQGMFVIPFMTRLXXXXXXXXXXXXXXXXXNPGIWSYEGVAGAHIVFSGLCFLAAIWHWV 112
           RQGMFVIPFMT L                 NPGIWSYEGVAGAHIVFSGLCFLAAIWHWV
Sbjct: 61  RQGMFVIPFMTHLGITNSWGGWSISGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWV 120

Query: 111 YWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLACFGF 1
           YWDLEIFCDERTGKPSLDLPKIFGIHLFL+G+ACFGF
Sbjct: 121 YWDLEIFCDERTGKPSLDLPKIFGIHLFLAGVACFGF 157


>gb|AFA27402.1| photosystem II CP47 chlorophyll apoprotein, partial [Potarophytum
           riparium]
          Length = 506

 Score =  286 bits (733), Expect = 2e-75
 Identities = 136/153 (88%), Positives = 136/153 (88%)
 Frame = -3

Query: 459 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGM 280
           MGLPWYRVHTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 279 FVIPFMTRLXXXXXXXXXXXXXXXXXNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 100
           FVIPFMTRL                 NPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL
Sbjct: 61  FVIPFMTRLGITNSWGGWSISGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120

Query: 99  EIFCDERTGKPSLDLPKIFGIHLFLSGLACFGF 1
           EIFCDERTGKPSLDLPKIFGIHLFLSGLACFGF
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGLACFGF 153


>gb|AEX95748.1| photosystem II CP47 chlorophyll apoprotein (chloroplast)
           [Ledebouria cordifolia]
          Length = 508

 Score =  286 bits (733), Expect = 2e-75
 Identities = 136/153 (88%), Positives = 136/153 (88%)
 Frame = -3

Query: 459 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGM 280
           MGLPWYRVHTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 279 FVIPFMTRLXXXXXXXXXXXXXXXXXNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 100
           FVIPFMTRL                 NPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL
Sbjct: 61  FVIPFMTRLGITNSWGGWSISGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120

Query: 99  EIFCDERTGKPSLDLPKIFGIHLFLSGLACFGF 1
           EIFCDERTGKPSLDLPKIFGIHLFLSGLACFGF
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGLACFGF 153


>gb|AEX95747.1| photosystem II CP47 chlorophyll apoprotein (chloroplast) [Drimia
           altissima]
          Length = 508

 Score =  286 bits (733), Expect = 2e-75
 Identities = 136/153 (88%), Positives = 136/153 (88%)
 Frame = -3

Query: 459 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGM 280
           MGLPWYRVHTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 279 FVIPFMTRLXXXXXXXXXXXXXXXXXNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 100
           FVIPFMTRL                 NPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL
Sbjct: 61  FVIPFMTRLGITNSWGGWSISGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120

Query: 99  EIFCDERTGKPSLDLPKIFGIHLFLSGLACFGF 1
           EIFCDERTGKPSLDLPKIFGIHLFLSGLACFGF
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGLACFGF 153


>gb|AEX95746.1| photosystem II CP47 chlorophyll apoprotein (chloroplast) [Bowiea
           volubilis] gi|372484215|gb|AEX95749.1| photosystem II
           CP47 chlorophyll apoprotein (chloroplast) [Ornithogalum
           tenuifolium] gi|372484217|gb|AEX95750.1| photosystem II
           CP47 chlorophyll apoprotein (chloroplast) [Oziroe
           biflora] gi|374974556|gb|AFA27372.1| photosystem II CP47
           chlorophyll apoprotein [Albuca kirkii]
          Length = 508

 Score =  286 bits (733), Expect = 2e-75
 Identities = 136/153 (88%), Positives = 136/153 (88%)
 Frame = -3

Query: 459 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGM 280
           MGLPWYRVHTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGM
Sbjct: 1   MGLPWYRVHTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGM 60

Query: 279 FVIPFMTRLXXXXXXXXXXXXXXXXXNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 100
           FVIPFMTRL                 NPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL
Sbjct: 61  FVIPFMTRLGITNSWGGWSISGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120

Query: 99  EIFCDERTGKPSLDLPKIFGIHLFLSGLACFGF 1
           EIFCDERTGKPSLDLPKIFGIHLFLSGLACFGF
Sbjct: 121 EIFCDERTGKPSLDLPKIFGIHLFLSGLACFGF 153