BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029578
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containi...   172   3e-41
ref|XP_002515711.1| pentatricopeptide repeat-containing protein,...   165   3e-39
ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containi...   152   2e-35
ref|XP_003526309.1| PREDICTED: pentatricopeptide repeat-containi...   100   1e-19
emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]    92   3e-17

>ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 736

 Score =  172 bits (436), Expect = 3e-41
 Identities = 85/123 (69%), Positives = 96/123 (78%)
 Frame = +3

Query: 153 LTSLQCGHLLQALTASKCFKKALQFHAHMITCGVLIQNTYLNTKLCAMYAASGNMPAARV 332
           LTSLQCG LLQ+ T +K FK+  Q HAHMI+  +L  NTYLNTKL A YA  G M  A V
Sbjct: 57  LTSLQCGALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEV 116

Query: 333 IFDGIVLKSSFLWNVMVRGYACNGCSFESLVLYRDMLSFGRRADNFTYPFVLMACGHLLL 512
           IFDGIVLK+SFLWN M+RGYA NG   +SLVLYR+ML FG+RADNFTYPFVL ACG LLL
Sbjct: 117 IFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLL 176

Query: 513 VEV 521
           VE+
Sbjct: 177 VEI 179



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 37/110 (33%), Positives = 51/110 (46%)
 Frame = +3

Query: 177 LLQALTASKCFKKALQFHAHMITCGVLIQNTYLNTKLCAMYAASGNMPAARVIFDGIVLK 356
           LL A    K  K+    H + +   +   N +    L  MY     M  AR +F+ +  K
Sbjct: 268 LLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWK 327

Query: 357 SSFLWNVMVRGYACNGCSFESLVLYRDMLSFGRRADNFTYPFVLMACGHL 506
            +  WN M+ GYA NG +FESL L+R M   G   D  T+  VL AC  +
Sbjct: 328 DTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQI 377



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 34/97 (35%), Positives = 51/97 (52%)
 Frame = +3

Query: 228 HAHMITCGVLIQNTYLNTKLCAMYAASGNMPAARVIFDGIVLKSSFLWNVMVRGYACNGC 407
           H+ ++ CG L  + Y+   L AMYA  G+M  AR++FD +  +    WN M+ GYA N  
Sbjct: 184 HSEVVVCG-LESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNAD 242

Query: 408 SFESLVLYRDMLSFGRRADNFTYPFVLMACGHLLLVE 518
           S  + +++  M   G  AD  T   +L AC  L  V+
Sbjct: 243 SGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVK 279


>ref|XP_002515711.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545148|gb|EEF46658.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 462

 Score =  165 bits (418), Expect = 3e-39
 Identities = 90/162 (55%), Positives = 110/162 (67%), Gaps = 11/162 (6%)
 Frame = +3

Query: 66  MNGCFAPKSLKLIHQSTAAIREALK-------NHNFL----TSLQCGHLLQALTASKCFK 212
           MNG   PK LK  HQ    +++ L        +HN L    TSLQCG +LQ LT+ K F 
Sbjct: 1   MNGSLTPKLLK--HQRLRFLKKLLAYSTTAYFSHNSLAEPLTSLQCGTVLQTLTSIKSFT 58

Query: 213 KALQFHAHMITCGVLIQNTYLNTKLCAMYAASGNMPAARVIFDGIVLKSSFLWNVMVRGY 392
           K  Q HA++IT G L  NTYL+TKL A YA+ G M AA++IFDGIVLK+SFLWN M+RGY
Sbjct: 59  KGQQLHAYIITSGNLQNNTYLSTKLAAFYASCGLMAAAQIIFDGIVLKNSFLWNFMIRGY 118

Query: 393 ACNGCSFESLVLYRDMLSFGRRADNFTYPFVLMACGHLLLVE 518
           ACNG   ++L LY+DM SFG++AD FTYPFV+ ACG L  VE
Sbjct: 119 ACNGFPVKALFLYQDMSSFGQKADKFTYPFVIKACGDLRDVE 160



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/103 (31%), Positives = 53/103 (51%)
 Frame = +3

Query: 210 KKALQFHAHMITCGVLIQNTYLNTKLCAMYAASGNMPAARVIFDGIVLKSSFLWNVMVRG 389
           K+  + H +++     + N +L   L  MY    +M  AR +F+ +  K +  WN M+ G
Sbjct: 261 KQGKEIHGYVVRNRHSVFNHFLINSLIEMYCKCNSMVDARKLFEHMAWKDTVSWNSMISG 320

Query: 390 YACNGCSFESLVLYRDMLSFGRRADNFTYPFVLMACGHLLLVE 518
           YA N  +FESL ++  M+  G + D  T+  VL AC  +  +E
Sbjct: 321 YARNRDAFESLRVFCRMVLEGTKPDKITFITVLGACEQITAME 363



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/93 (32%), Positives = 46/93 (49%)
 Frame = +3

Query: 228 HAHMITCGVLIQNTYLNTKLCAMYAASGNMPAARVIFDGIVLKSSFLWNVMVRGYACNGC 407
           H  ++  G  + + Y+   L AMY+  GNM  AR++FD + ++    WN M+ GY  NG 
Sbjct: 166 HCEVVITGFNL-DIYVGNSLLAMYSKFGNMKMARMVFDRMPVRDLTSWNTMISGYLKNGK 224

Query: 408 SFESLVLYRDMLSFGRRADNFTYPFVLMACGHL 506
             E L ++  M   G   D+ T   +L  C  L
Sbjct: 225 PREVLAIFNLMKQIGLSVDDMTLIGLLCTCAEL 257


>ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 701

 Score =  152 bits (385), Expect = 2e-35
 Identities = 79/138 (57%), Positives = 96/138 (69%)
 Frame = +3

Query: 108 QSTAAIREALKNHNFLTSLQCGHLLQALTASKCFKKALQFHAHMITCGVLIQNTYLNTKL 287
           ++TA +     + +   SLQCG LLQ+LT SK   +ALQ HAH+ T G L +NTYL TKL
Sbjct: 5   KTTATLIPKPSSTSTFDSLQCGTLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKL 64

Query: 288 CAMYAASGNMPAARVIFDGIVLKSSFLWNVMVRGYACNGCSFESLVLYRDMLSFGRRADN 467
            A YA  G+MP A+ IFD IVLK+SFLWN M+RGYACN     +L LY  ML FG++ DN
Sbjct: 65  AACYAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDN 124

Query: 468 FTYPFVLMACGHLLLVEV 521
           FTYPFVL ACG LLL E+
Sbjct: 125 FTYPFVLKACGDLLLREM 142



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 28/95 (29%), Positives = 53/95 (55%)
 Frame = +3

Query: 237 MITCGVLIQNTYLNTKLCAMYAASGNMPAARVIFDGIVLKSSFLWNVMVRGYACNGCSFE 416
           ++  G L ++ Y+   + +MY   G++ AARV+FD ++++    WN M+ G+  NG +  
Sbjct: 149 LVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARG 208

Query: 417 SLVLYRDMLSFGRRADNFTYPFVLMACGHLLLVEV 521
           +  ++ DM   G   D  T   +L ACG ++ ++V
Sbjct: 209 AFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKV 243


>ref|XP_003526309.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 560

 Score =  100 bits (250), Expect = 1e-19
 Identities = 47/73 (64%), Positives = 57/73 (78%)
 Frame = +3

Query: 303 ASGNMPAARVIFDGIVLKSSFLWNVMVRGYACNGCSFESLVLYRDMLSFGRRADNFTYPF 482
           A G+MP A+ IF  IVLK+SFLWN M+RGYACN    ++L+LYR+ML FG + DNFTYPF
Sbjct: 12  ACGHMPYAQHIFHQIVLKNSFLWNSMIRGYACNNSPSKALILYREMLHFGHKPDNFTYPF 71

Query: 483 VLMACGHLLLVEV 521
           VL ACG LLL E+
Sbjct: 72  VLKACGDLLLREI 84


>emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
          Length = 676

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 53/118 (44%), Positives = 70/118 (59%), Gaps = 3/118 (2%)
 Frame = +3

Query: 177 LLQALTASKCFKKALQFHAHMITCGVLIQ--NTYLNTKLCAMYAASGNMPAARVIFDGIV 350
           LLQ  T+ K      Q HAH IT G+L    + +L + L A YA  G  P AR +FD + 
Sbjct: 24  LLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCAPHARKLFDELR 83

Query: 351 LKSSFLWNVMVRGYACNGCSFESLVLYRDMLSFGRR-ADNFTYPFVLMACGHLLLVEV 521
             S F WN M+R Y  +G S+++L L+  ML+ GRR  DN+TYPFV+ ACG  LL E+
Sbjct: 84  NPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEM 141



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/98 (33%), Positives = 49/98 (50%)
 Frame = +3

Query: 228 HAHMITCGVLIQNTYLNTKLCAMYAASGNMPAARVIFDGIVLKSSFLWNVMVRGYACNGC 407
           HA  +  G    + ++   L AMY   G M  AR +FD +  ++   WN M+ GY  NGC
Sbjct: 146 HARTVMSG-FDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGC 204

Query: 408 SFESLVLYRDMLSFGRRADNFTYPFVLMACGHLLLVEV 521
             E+L+++  M+  G   D  T   VL  C +L  +EV
Sbjct: 205 VKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEV 242