BLASTX nr result

ID: Dioscorea21_contig00029568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029568
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553022.1| PREDICTED: uncharacterized protein LOC100788...    66   3e-09
gb|ACN78974.1| retrotransposon protein [Glycine max] gi|22501615...    64   1e-08
emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera]    64   1e-08
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]    64   1e-08
ref|XP_003524238.1| PREDICTED: uncharacterized protein LOC100782...    64   2e-08

>ref|XP_003553022.1| PREDICTED: uncharacterized protein LOC100788433 [Glycine max]
          Length = 1433

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 35/95 (36%), Positives = 50/95 (52%)
 Frame = -3

Query: 345 FIQSRLTTHLNLVVQPSPHVRXXXXXXXXXXXXGSCLDIKLQMAETVFTVDLILLPIYGV 166
           F+Q RL T L+L   P+  +R              C D  + +    FT+   LLPI G 
Sbjct: 373 FLQPRLATFLHLPTVPTNPLRVLVGNGAVLTCTHLCPDTTISLQSHHFTLTFHLLPISGA 432

Query: 165 DVVFGVQWLR*LGPILFDYDQLWLEFDYLGNWIKL 61
           DV+ G+QWL+ LGPI  DY  L ++F +LG  ++L
Sbjct: 433 DVILGIQWLKLLGPITTDYTSLIMKFHHLGQPVEL 467


>gb|ACN78974.1| retrotransposon protein [Glycine max] gi|225016158|gb|ACN78981.1|
           retrotransposon protein [Glycine max]
          Length = 1261

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/76 (42%), Positives = 44/76 (57%)
 Frame = -3

Query: 240 CLDIKLQMAETVFTVDLILLPIYGVDVVFGVQWLR*LGPILFDYDQLWLEFDYLGNWIKL 61
           C ++ + +    F VD  +LPI G DVV GVQWL+ LGP+L DY  L ++F Y    I+L
Sbjct: 472 CPEVAVHIQAHTFLVDFHILPICGADVVLGVQWLKSLGPVLTDYATLTMKFIYNDKLIEL 531

Query: 60  KGLDPVQVDLARPASL 13
           KG     +D   P+ L
Sbjct: 532 KGDRDANIDQISPSQL 547


>emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera]
          Length = 1366

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 29/71 (40%), Positives = 44/71 (61%)
 Frame = -3

Query: 243 SCLDIKLQMAETVFTVDLILLPIYGVDVVFGVQWLR*LGPILFDYDQLWLEFDYLGNWIK 64
           SC  + L M   ++T+D  +L + G D+V GVQWL+ LGPIL+D+ +L +EF       K
Sbjct: 386 SCAAVPLHMQGNLYTIDFYILTLGGCDIVLGVQWLQTLGPILWDFSRLQMEFSVWDKPRK 445

Query: 63  LKGLDPVQVDL 31
           L+G+ P  + L
Sbjct: 446 LQGMSPTGISL 456


>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
          Length = 1469

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 29/71 (40%), Positives = 44/71 (61%)
 Frame = -3

Query: 243 SCLDIKLQMAETVFTVDLILLPIYGVDVVFGVQWLR*LGPILFDYDQLWLEFDYLGNWIK 64
           SC  + L M   ++T+D  +L + G D+V GVQWL+ LGPIL+D+ +L +EF       K
Sbjct: 419 SCAAVPLHMQGNLYTIDFYILTLGGCDIVLGVQWLQTLGPILWDFSRLQMEFSVWDKPRK 478

Query: 63  LKGLDPVQVDL 31
           L+G+ P  + L
Sbjct: 479 LQGMSPTGISL 489


>ref|XP_003524238.1| PREDICTED: uncharacterized protein LOC100782971 [Glycine max]
          Length = 1863

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 35/96 (36%), Positives = 51/96 (53%)
 Frame = -3

Query: 345 FIQSRLTTHLNLVVQPSPHVRXXXXXXXXXXXXGSCLDIKLQMAETVFTVDLILLPIYGV 166
           F+Q R+   L L ++ +  ++             SC    L + +  FTV L +LPI G 
Sbjct: 329 FVQPRIAKFLGLPMEDTTSLQVMVGNGSVLECKQSCPATTLLLQQHSFTVTLRVLPISGA 388

Query: 165 DVVFGVQWLR*LGPILFDYDQLWLEFDYLGNWIKLK 58
           DVV GV+WLR LGPI+ DY    ++F +LG  I L+
Sbjct: 389 DVVLGVEWLRTLGPIITDYTSFTMQFTHLGQPIILR 424


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