BLASTX nr result

ID: Dioscorea21_contig00029564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029564
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFN53666.1| hypothetical protein [Linum usitatissimum]              85   5e-15
ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containi...    85   7e-15
ref|XP_002976627.1| hypothetical protein SELMODRAFT_105356 [Sela...    84   9e-15
emb|CBI27273.3| unnamed protein product [Vitis vinifera]               84   1e-14
ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containi...    84   2e-14

>gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
          Length = 850

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 38/65 (58%), Positives = 52/65 (80%)
 Frame = +1

Query: 4   RDVSAWTAMIGGMAMHGRGEEAAELFRQMKVSGIEPDSLTFTSVLHACSHCGLVEMGMRI 183
           +DV  W+AMI G+AMHGRGE A ELF  M+ + ++P+S+TFT++L ACSH GLV+ G R+
Sbjct: 541 KDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRL 600

Query: 184 FEEME 198
           F+EME
Sbjct: 601 FDEME 605


>ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Cucumis sativus]
           gi|449487109|ref|XP_004157499.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g74630-like [Cucumis sativus]
          Length = 642

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 38/64 (59%), Positives = 47/64 (73%)
 Frame = +1

Query: 4   RDVSAWTAMIGGMAMHGRGEEAAELFRQMKVSGIEPDSLTFTSVLHACSHCGLVEMGMRI 183
           R   +WTAMI GMAMHG GEEA  LF +M+ S I+PDS+TF S+L+ACSH GLV++G   
Sbjct: 333 RSAVSWTAMIAGMAMHGYGEEAIRLFNEMEESNIKPDSITFISILYACSHAGLVDLGCSY 392

Query: 184 FEEM 195
           F  M
Sbjct: 393 FSRM 396


>ref|XP_002976627.1| hypothetical protein SELMODRAFT_105356 [Selaginella moellendorffii]
           gi|300155665|gb|EFJ22296.1| hypothetical protein
           SELMODRAFT_105356 [Selaginella moellendorffii]
          Length = 734

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 38/67 (56%), Positives = 49/67 (73%)
 Frame = +1

Query: 1   GRDVSAWTAMIGGMAMHGRGEEAAELFRQMKVSGIEPDSLTFTSVLHACSHCGLVEMGMR 180
           G++V +WTAMI G A H RG+ A ELFR+M++ GI+ D +TFTS+LHACSH GLV +G  
Sbjct: 575 GKNVLSWTAMIVGYAQHARGDGALELFREMELDGIQADEITFTSILHACSHRGLVRVGRE 634

Query: 181 IFEEMEE 201
            F  M E
Sbjct: 635 YFRSMVE 641


>emb|CBI27273.3| unnamed protein product [Vitis vinifera]
          Length = 340

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 37/66 (56%), Positives = 45/66 (68%)
 Frame = +1

Query: 4   RDVSAWTAMIGGMAMHGRGEEAAELFRQMKVSGIEPDSLTFTSVLHACSHCGLVEMGMRI 183
           +D+ +W  MIGG+AMHG    A ELFRQM+  G EPD +TF  VL ACSH GLVE+G + 
Sbjct: 128 KDIISWNVMIGGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQC 187

Query: 184 FEEMEE 201
           F  M E
Sbjct: 188 FSSMVE 193


>ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Vitis vinifera]
          Length = 643

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 35/66 (53%), Positives = 49/66 (74%)
 Frame = +1

Query: 4   RDVSAWTAMIGGMAMHGRGEEAAELFRQMKVSGIEPDSLTFTSVLHACSHCGLVEMGMRI 183
           R + +WT+MI G+AMHG GEEA +LF +M+ SGI PD + F S+L+ACSH GL+E G   
Sbjct: 334 RSIVSWTSMIAGLAMHGYGEEAIQLFHEMEESGIRPDGIAFISILYACSHAGLIEKGYEY 393

Query: 184 FEEMEE 201
           F +M++
Sbjct: 394 FYKMKD 399


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