BLASTX nr result

ID: Dioscorea21_contig00029554 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029554
         (956 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB64937.1| TdcA1-ORF1-ORF2 [Daucus carota]                       144   4e-32
dbj|BAB64529.1| TdcA1-ORF2 [Daucus carota]                            144   4e-32
gb|ABG37667.2| transposase tnp2 [Populus trichocarpa]                 125   1e-26
gb|AAB99763.1| PttA2 protein [Petunia x hybrida]                      123   7e-26
gb|AAB97814.1| PttA' [Petunia x hybrida]                              119   1e-24

>dbj|BAB64937.1| TdcA1-ORF1-ORF2 [Daucus carota]
          Length = 988

 Score =  144 bits (362), Expect = 4e-32
 Identities = 63/104 (60%), Positives = 80/104 (76%)
 Frame = +3

Query: 3   VQYRWMYPFERYLKKLKKIVRNKARVEGSICNAYLVEEATSFCAHYFEPHVRTRHRKTPR 182
           VQYRWMYPFER+L+ LK  ++NKARVEGS+CNAYLVEEA++FC+HYFE HV+T+HRK PR
Sbjct: 197 VQYRWMYPFERFLRHLKNNIKNKARVEGSMCNAYLVEEASTFCSHYFEQHVQTKHRKVPR 256

Query: 183 NDDGGEDVEHFGNLSIFTRPGKPLGKGKIKYLNEDEYAAAQMYI 314
           ND  G      GN SIF+ PG+  G   ++YL++ EY AA  Y+
Sbjct: 257 NDSSGGGENFEGNFSIFSHPGRASGCANVRYLDDREYMAAHNYV 300



 Score =  125 bits (313), Expect = 2e-26
 Identities = 77/213 (36%), Positives = 110/213 (51%), Gaps = 5/213 (2%)
 Frame = +1

Query: 325  TPCASGGVTPNGEPTMHARDTTTSSSD--CLPLALDESRRPRIKLVNGMLHPSDVCARKI 498
            TP  S   TPN   T  A ++   S+D   +  ++    R RI++++G+L PS  C+R I
Sbjct: 642  TPAQSQPNTPNVS-TASANESANESADEGWVVGSMHNDGRLRIEVISGLLEPSGACSRAI 700

Query: 499  TFIFKERMDENGYSWKNVSKETKDFYWNEFQKFFV*DESMSSAIKMAWQRKAAERYRALM 678
            T    ER D  G++WK VSKE KDFY+ EF+K FV  +      K+ W +KA  RY    
Sbjct: 701  TDSISERQDPTGFNWKVVSKEVKDFYFEEFKKSFVWRQEDKQIYKV-WVKKARNRYSNFC 759

Query: 679  CNLRK---GKEKSIHVSDSAWKTWTEAWNSPEYKTRCEKATANRLTEIAGPGSGISRHTG 849
             + RK     E    V+   W  W E W +P+++T+ +    NR     G       HTG
Sbjct: 760  SDARKKWEAGEVDNRVAMHVWLPWVEFWKTPDFQTKSKTQKKNRR---GGTDHYPPTHTG 816

Query: 850  GSISHSSHADRLRSRLGRDPRPFELFEVTHTKK 948
            GS S  +HA  L    G+DP P +++ +THTKK
Sbjct: 817  GSASLRTHAAVLAETNGKDPTPADVYLLTHTKK 849


>dbj|BAB64529.1| TdcA1-ORF2 [Daucus carota]
          Length = 812

 Score =  144 bits (362), Expect = 4e-32
 Identities = 63/104 (60%), Positives = 80/104 (76%)
 Frame = +3

Query: 3   VQYRWMYPFERYLKKLKKIVRNKARVEGSICNAYLVEEATSFCAHYFEPHVRTRHRKTPR 182
           VQYRWMYPFER+L+ LK  ++NKARVEGS+CNAYLVEEA++FC+HYFE HV+T+HRK PR
Sbjct: 421 VQYRWMYPFERFLRHLKNNIKNKARVEGSMCNAYLVEEASTFCSHYFEQHVQTKHRKVPR 480

Query: 183 NDDGGEDVEHFGNLSIFTRPGKPLGKGKIKYLNEDEYAAAQMYI 314
           ND  G      GN SIF+ PG+  G   ++YL++ EY AA  Y+
Sbjct: 481 NDSSGGGENFEGNFSIFSHPGRASGCANVRYLDDREYMAAHNYV 524


>gb|ABG37667.2| transposase tnp2 [Populus trichocarpa]
          Length = 654

 Score =  125 bits (315), Expect = 1e-26
 Identities = 61/106 (57%), Positives = 78/106 (73%), Gaps = 2/106 (1%)
 Frame = +3

Query: 3   VQYRWMYPFERYLKKLKKIVRNKARVEGSICNAYLVEEATSFCAHYFEPHVRTRHRKTPR 182
           VQYRWMYPFERYL  +KK V+NKA VE SIC AY+VEE ++F ++YFEPH+RTR  + PR
Sbjct: 539 VQYRWMYPFERYLFNIKKKVKNKAHVEASICEAYIVEEISTFISYYFEPHLRTRINRVPR 598

Query: 183 NDDGGEDVEHFGNLSIFTRPGKPLGKGKI--KYLNEDEYAAAQMYI 314
           +DDGGE V   GNLSIF+  G+P  K  +  +YL+E E+  A  Y+
Sbjct: 599 HDDGGE-VPSSGNLSIFSNTGRPTPKNAVRGRYLSEIEFKQAHNYV 643


>gb|AAB99763.1| PttA2 protein [Petunia x hybrida]
          Length = 431

 Score =  123 bits (308), Expect = 7e-26
 Identities = 61/159 (38%), Positives = 88/159 (55%)
 Frame = +1

Query: 466 LHPSDVCARKITFIFKERMDENGYSWKNVSKETKDFYWNEFQKFFV*DESMSSAIKMAWQ 645
           L PS +C+  I+  F+  +D NG +WKNVS+E KDFY+ EF+K F  D S+ +A+K+AW+
Sbjct: 117 LEPSRLCSESISAAFRHELDPNGINWKNVSQELKDFYYGEFKKAFYWDSSIENAVKIAWK 176

Query: 646 RKAAERYRALMCNLRKGKEKSIHVSDSAWKTWTEAWNSPEYKTRCEKATANRLTEIAGPG 825
           RKAA RY   +  ++    +   + D+ W +W   W  P+ + + E A  NR     G  
Sbjct: 177 RKAARRYSDFISKIKADGIQLNCIHDNVWASWLRLWEDPKCREKSETAQRNR---CGGNE 233

Query: 826 SGISRHTGGSISHSSHADRLRSRLGRDPRPFELFEVTHT 942
             +  HTGGSI+   H  RL    GRD  P E+    HT
Sbjct: 234 VALGTHTGGSITIGEHRKRLVIDKGRDVTPAEIHLHVHT 272


>gb|AAB97814.1| PttA' [Petunia x hybrida]
          Length = 430

 Score =  119 bits (297), Expect = 1e-24
 Identities = 60/159 (37%), Positives = 88/159 (55%)
 Frame = +1

Query: 466 LHPSDVCARKITFIFKERMDENGYSWKNVSKETKDFYWNEFQKFFV*DESMSSAIKMAWQ 645
           L PS +C+  I+  F+  +D NG +WKNVS+E KDFY+ EF+ F+  D S+ +A+K+AW+
Sbjct: 117 LEPSRLCSESISAAFRHELDPNGINWKNVSQELKDFYYGEFKAFYW-DSSIENAVKIAWK 175

Query: 646 RKAAERYRALMCNLRKGKEKSIHVSDSAWKTWTEAWNSPEYKTRCEKATANRLTEIAGPG 825
           RKAA RY   +  ++    +   + D+ W +W   W  P+ + + E A  NR     G  
Sbjct: 176 RKAARRYSDFISKIKADGIQLNCIHDNVWASWLRLWEDPKCREKSETAQRNR---CGGNE 232

Query: 826 SGISRHTGGSISHSSHADRLRSRLGRDPRPFELFEVTHT 942
             +  HTGGSI+   H  RL    GRD  P E+    HT
Sbjct: 233 VALGTHTGGSITIGEHRKRLVIDKGRDVTPAEIHLHVHT 271


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