BLASTX nr result

ID: Dioscorea21_contig00029540 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029540
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containi...    73   3e-11
ref|XP_003611862.1| Pentatricopeptide repeat-containing protein ...    71   8e-11
ref|XP_002522388.1| pentatricopeptide repeat-containing protein,...    71   1e-10
ref|XP_002462808.1| hypothetical protein SORBIDRAFT_02g032350 [S...    70   2e-10
gb|EAZ10036.1| hypothetical protein OsI_32340 [Oryza sativa Indi...    69   3e-10

>ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Glycine max]
          Length = 667

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 37/81 (45%), Positives = 47/81 (58%)
 Frame = +2

Query: 2   LIIGKQVHEYISANIVNPSVTLYNAVIDMYAKCGLLNIALQLFSSTPTKSVVSWNVXXXX 181
           L +GKQ H YI  NI+  SVTL N++IDMYAKCG L  A+ +F   P K+VVSWNV    
Sbjct: 386 LALGKQAHCYICDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMPEKNVVSWNVIIGA 445

Query: 182 XXXXXXXXXXXDHFEQMVAAG 244
                      + F+ M A+G
Sbjct: 446 LALHGFGEEAIEMFKSMQASG 466


>ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513197|gb|AES94820.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 663

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 36/81 (44%), Positives = 45/81 (55%)
 Frame = +2

Query: 2   LIIGKQVHEYISANIVNPSVTLYNAVIDMYAKCGLLNIALQLFSSTPTKSVVSWNVXXXX 181
           L +GKQ H YI  N +  S TL NA+IDMYAKCG L  A+ +F   P K+ VSWNV    
Sbjct: 383 LALGKQAHSYIFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGA 442

Query: 182 XXXXXXXXXXXDHFEQMVAAG 244
                      + FE+M A+G
Sbjct: 443 LALHGYGKEAIEMFEKMQASG 463


>ref|XP_002522388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538466|gb|EEF40072.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 472

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/81 (43%), Positives = 48/81 (59%)
 Frame = +2

Query: 2   LIIGKQVHEYISANIVNPSVTLYNAVIDMYAKCGLLNIALQLFSSTPTKSVVSWNVXXXX 181
           L++GK++H YI       SVTL N++IDMYAKCG L IA+ +F+  P K++VSWNV    
Sbjct: 337 LVMGKKIHNYICGTSSMYSVTLCNSLIDMYAKCGALRIAIDVFNEMPNKNLVSWNVIIGA 396

Query: 182 XXXXXXXXXXXDHFEQMVAAG 244
                      + F +M AAG
Sbjct: 397 LALHGYGVEAVELFRKMQAAG 417


>ref|XP_002462808.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
           gi|241926185|gb|EER99329.1| hypothetical protein
           SORBIDRAFT_02g032350 [Sorghum bicolor]
          Length = 638

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 35/82 (42%), Positives = 45/82 (54%)
 Frame = +2

Query: 2   LIIGKQVHEYISANIVNPSVTLYNAVIDMYAKCGLLNIALQLFSSTPTKSVVSWNVXXXX 181
           L +GK VH YI  NI NP V+L N+++DMYAKCG ++ A+ LFS    ++VVSWNV    
Sbjct: 361 LTVGKMVHLYIRDNIYNPDVSLVNSLLDMYAKCGQVDTAISLFSEMCNRNVVSWNVIIGG 420

Query: 182 XXXXXXXXXXXDHFEQMVAAGF 247
                        F  MV   F
Sbjct: 421 LAMHGRALDTITFFRSMVTDSF 442


>gb|EAZ10036.1| hypothetical protein OsI_32340 [Oryza sativa Indica Group]
          Length = 644

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/83 (38%), Positives = 46/83 (55%)
 Frame = +2

Query: 2   LIIGKQVHEYISANIVNPSVTLYNAVIDMYAKCGLLNIALQLFSSTPTKSVVSWNVXXXX 181
           L  GK +H+ I  N  NP V L+N+++DMYA+CG ++ A+ LFS  P+K+V+SWN     
Sbjct: 359 LASGKMIHDCIRDNFHNPGVALFNSLLDMYARCGQVDTAISLFSEMPSKNVISWNAIIGA 418

Query: 182 XXXXXXXXXXXDHFEQMVAAGFP 250
                        F  MV+  FP
Sbjct: 419 LAMHGRAQDALMFFRSMVSDAFP 441


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