BLASTX nr result

ID: Dioscorea21_contig00029445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029445
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA59758.1| TPA: hypothetical protein ZEAMMB73_211431 [Zea m...   149   2e-34
ref|XP_003561352.1| PREDICTED: pentatricopeptide repeat-containi...   142   4e-32
ref|XP_002459421.1| hypothetical protein SORBIDRAFT_02g004410 [S...   140   1e-31
ref|NP_001059032.1| Os07g0179000 [Oryza sativa Japonica Group] g...   135   3e-30
gb|EAZ02971.1| hypothetical protein OsI_25111 [Oryza sativa Indi...   135   3e-30

>tpg|DAA59758.1| TPA: hypothetical protein ZEAMMB73_211431 [Zea mays]
          Length = 732

 Score =  149 bits (376), Expect = 2e-34
 Identities = 69/123 (56%), Positives = 95/123 (77%)
 Frame = -2

Query: 369 FRDMKSKGLLIDRAVYGALIEGFVAEGKVGNGCELFKEMIDDGYRADLMHYNCLISGLCE 190
           F++M+SKGLL+DR VY +LI+G+VA G+VG+GC L  E++D GYRADL  YN LI GLC 
Sbjct: 363 FKEMRSKGLLVDRMVYASLIDGYVAVGRVGDGCRLLNELVDAGYRADLGIYNTLIIGLCG 422

Query: 189 VGKGDKAYKLIQFAMQEELLPSFETMTPLLACYVDADERDRFFQLVNSISELGLSVMDHL 10
           +G+ DKA+KL Q  +QE+L+PS +T++PLLACY +  E   FF LVN ++E+GLSV++ L
Sbjct: 423 IGREDKAHKLFQIVLQEDLMPSSDTVSPLLACYAEKGEMVTFFGLVNKLAEMGLSVVEML 482

Query: 9   SHF 1
             F
Sbjct: 483 VDF 485


>ref|XP_003561352.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20740-like [Brachypodium distachyon]
          Length = 732

 Score =  142 bits (357), Expect = 4e-32
 Identities = 65/123 (52%), Positives = 89/123 (72%)
 Frame = -2

Query: 369 FRDMKSKGLLIDRAVYGALIEGFVAEGKVGNGCELFKEMIDDGYRADLMHYNCLISGLCE 190
           F +M+ KGLL+DR V+ +L++G+VA+G+VG+GC + KEM+D GYRADL  YN LI GLC 
Sbjct: 363 FEEMRKKGLLVDRTVFASLVDGYVADGRVGDGCRVLKEMVDAGYRADLGTYNTLIGGLCG 422

Query: 189 VGKGDKAYKLIQFAMQEELLPSFETMTPLLACYVDADERDRFFQLVNSISELGLSVMDHL 10
           +G+ DKAYK+ Q  +QEEL+PS ET++ LL CY D  E  + F LV+ + EL L   D+L
Sbjct: 423 IGREDKAYKMFQIILQEELVPSSETVSQLLVCYADKGEMIKIFGLVDKLVELRLPATDYL 482

Query: 9   SHF 1
             F
Sbjct: 483 VDF 485


>ref|XP_002459421.1| hypothetical protein SORBIDRAFT_02g004410 [Sorghum bicolor]
           gi|241922798|gb|EER95942.1| hypothetical protein
           SORBIDRAFT_02g004410 [Sorghum bicolor]
          Length = 735

 Score =  140 bits (352), Expect = 1e-31
 Identities = 67/123 (54%), Positives = 93/123 (75%)
 Frame = -2

Query: 369 FRDMKSKGLLIDRAVYGALIEGFVAEGKVGNGCELFKEMIDDGYRADLMHYNCLISGLCE 190
           F++M+SKGLL+ R+VY +LI+G+VA G+VG+GC L KE++D G RADL  YN LISGLC 
Sbjct: 366 FKEMRSKGLLVARSVYASLIDGYVAAGRVGDGCRLLKELVDAGSRADLGIYNTLISGLCG 425

Query: 189 VGKGDKAYKLIQFAMQEELLPSFETMTPLLACYVDADERDRFFQLVNSISELGLSVMDHL 10
           +G+ DKA+ L +  +QEEL+PS +T++PLLA Y +  E   FF LVN ++ELGL V++ L
Sbjct: 426 IGREDKAHNLFRIVLQEELMPSSDTVSPLLARYAEKGEMVTFFGLVNKLAELGLPVIEML 485

Query: 9   SHF 1
             F
Sbjct: 486 VDF 488


>ref|NP_001059032.1| Os07g0179000 [Oryza sativa Japonica Group]
           gi|34393469|dbj|BAC83029.1| putative fertility restorer
           [Oryza sativa Japonica Group]
           gi|50509181|dbj|BAD30332.1| putative fertility restorer
           [Oryza sativa Japonica Group]
           gi|113610568|dbj|BAF20946.1| Os07g0179000 [Oryza sativa
           Japonica Group] gi|125599319|gb|EAZ38895.1| hypothetical
           protein OsJ_23314 [Oryza sativa Japonica Group]
           gi|215712269|dbj|BAG94396.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215767408|dbj|BAG99636.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 727

 Score =  135 bits (341), Expect = 3e-30
 Identities = 64/123 (52%), Positives = 90/123 (73%)
 Frame = -2

Query: 369 FRDMKSKGLLIDRAVYGALIEGFVAEGKVGNGCELFKEMIDDGYRADLMHYNCLISGLCE 190
           F +M+ KGLL+DR VY +LI+G+V+ G+V +GC + KEM+D GYRADL  YN LI GLCE
Sbjct: 358 FGEMRRKGLLVDRMVYASLIDGYVSTGRVSDGCRVLKEMVDAGYRADLGIYNTLIGGLCE 417

Query: 189 VGKGDKAYKLIQFAMQEELLPSFETMTPLLACYVDADERDRFFQLVNSISELGLSVMDHL 10
           + + DKA+K+ Q  +QE+L+PS ET++PLLA Y D  E  +FF LV+ + EL L +++ L
Sbjct: 418 IEREDKAHKMFQIVVQEDLIPSSETVSPLLARYADKGEMVKFFGLVDKLVELSLPIVEIL 477

Query: 9   SHF 1
             F
Sbjct: 478 VDF 480


>gb|EAZ02971.1| hypothetical protein OsI_25111 [Oryza sativa Indica Group]
          Length = 728

 Score =  135 bits (341), Expect = 3e-30
 Identities = 64/123 (52%), Positives = 90/123 (73%)
 Frame = -2

Query: 369 FRDMKSKGLLIDRAVYGALIEGFVAEGKVGNGCELFKEMIDDGYRADLMHYNCLISGLCE 190
           F +M+ KGLL+DR VY +LI+G+V+ G+V +GC + KEM+D GYRADL  YN LI GLCE
Sbjct: 359 FGEMRRKGLLVDRMVYASLIDGYVSTGRVSDGCRVLKEMVDAGYRADLGIYNTLIGGLCE 418

Query: 189 VGKGDKAYKLIQFAMQEELLPSFETMTPLLACYVDADERDRFFQLVNSISELGLSVMDHL 10
           + + DKA+K+ Q  +QE+L+PS ET++PLLA Y D  E  +FF LV+ + EL L +++ L
Sbjct: 419 IEREDKAHKMFQIVVQEDLIPSSETVSPLLARYADKGEMVKFFGLVDKLVELSLPIVEIL 478

Query: 9   SHF 1
             F
Sbjct: 479 VDF 481


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