BLASTX nr result

ID: Dioscorea21_contig00029306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029306
         (213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634126.1| PREDICTED: LOW QUALITY PROTEIN: tubulin beta...   114   6e-24
emb|CBI22728.3| unnamed protein product [Vitis vinifera]              114   6e-24
ref|XP_002510784.1| tubulin beta chain, putative [Ricinus commun...   114   6e-24
ref|XP_002267380.1| PREDICTED: tubulin beta-1 chain [Vitis vinif...   114   6e-24
ref|XP_002509780.1| tubulin beta chain, putative [Ricinus commun...   114   8e-24

>ref|XP_003634126.1| PREDICTED: LOW QUALITY PROTEIN: tubulin beta-8 chain-like [Vitis
           vinifera]
          Length = 159

 Score =  114 bits (286), Expect = 6e-24
 Identities = 51/53 (96%), Positives = 53/53 (100%)
 Frame = +2

Query: 53  MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGDTDLQLERVNVYYNE 211
           MREILH+QGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGDT+LQLERVNVYYNE
Sbjct: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGDTELQLERVNVYYNE 53


>emb|CBI22728.3| unnamed protein product [Vitis vinifera]
          Length = 92

 Score =  114 bits (286), Expect = 6e-24
 Identities = 51/53 (96%), Positives = 53/53 (100%)
 Frame = +2

Query: 53  MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGDTDLQLERVNVYYNE 211
           MREILH+QGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGDT+LQLERVNVYYNE
Sbjct: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGDTELQLERVNVYYNE 53


>ref|XP_002510784.1| tubulin beta chain, putative [Ricinus communis]
           gi|223549899|gb|EEF51386.1| tubulin beta chain, putative
           [Ricinus communis]
          Length = 448

 Score =  114 bits (286), Expect = 6e-24
 Identities = 52/53 (98%), Positives = 52/53 (98%)
 Frame = +2

Query: 53  MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGDTDLQLERVNVYYNE 211
           MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGD DLQLERVNVYYNE
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGDNDLQLERVNVYYNE 53


>ref|XP_002267380.1| PREDICTED: tubulin beta-1 chain [Vitis vinifera]
          Length = 449

 Score =  114 bits (286), Expect = 6e-24
 Identities = 51/53 (96%), Positives = 53/53 (100%)
 Frame = +2

Query: 53  MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGDTDLQLERVNVYYNE 211
           MREILH+QGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGDT+LQLERVNVYYNE
Sbjct: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGDTELQLERVNVYYNE 53


>ref|XP_002509780.1| tubulin beta chain, putative [Ricinus communis]
           gi|223549679|gb|EEF51167.1| tubulin beta chain, putative
           [Ricinus communis]
          Length = 446

 Score =  114 bits (285), Expect = 8e-24
 Identities = 51/53 (96%), Positives = 52/53 (98%)
 Frame = +2

Query: 53  MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGDTDLQLERVNVYYNE 211
           MREILH+QGGQCGNQIGAKFWEVVCAEHGIDSTGRY GDTDLQLERVNVYYNE
Sbjct: 1   MREILHVQGGQCGNQIGAKFWEVVCAEHGIDSTGRYHGDTDLQLERVNVYYNE 53


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