BLASTX nr result

ID: Dioscorea21_contig00029184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00029184
         (603 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272748.2| PREDICTED: uncharacterized protein LOC100256...    99   4e-19
gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebenn...    96   4e-18
emb|CAN74319.1| hypothetical protein VITISV_035345 [Vitis vinifera]    94   1e-17
emb|CAN74843.1| hypothetical protein VITISV_037042 [Vitis vinifera]    94   2e-17
ref|XP_002273591.2| PREDICTED: uncharacterized protein LOC100254...    92   9e-17

>ref|XP_002272748.2| PREDICTED: uncharacterized protein LOC100256388 [Vitis vinifera]
          Length = 2667

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 6/194 (3%)
 Frame = +2

Query: 32  MNLNIFCWNCRGISNRDTLDRIKDVQAHLNPSIICLLESK---ANTDRILHFGAGFRKHW 202
           M + I CWN RG+ + D    IK V  +    ++CLLE+K    +T  +   G G  +  
Sbjct: 1   MRIKILCWNVRGLHDCDKRKLIKGVVRNQKADLVCLLETKVKDVSTQLVNSVGVG--RFL 58

Query: 203 HWAAIPAVGLSGGIVVLWSHTIGSVTPIVTSRWALHLAISTGS--VDWVFTAIYNSQLLS 376
           +WA++ A G +GG++++W + +     + +  +++ +     S    WVF+ +Y   + S
Sbjct: 59  NWASVDARGTAGGLLLIWDNRVLENLEVESGGYSISVRFRNCSDGFSWVFSGVYGPVIGS 118

Query: 377 DQKVLWRHLAGLTSL-NLPWLLGGDFNAIVSSEEHRGGTFRNYAAKSLHFSDFIFNNALI 553
           +++  W  L  +  L   PW +GGDFNA+   EE R        A    FS+ I    L 
Sbjct: 119 EKEDFWEELGAIRGLWEDPWCIGGDFNAVRYPEERRNAP--RLTADMRRFSEVIGELGLR 176

Query: 554 DLSFSGSRFTWTNG 595
           D+  +G  FTW  G
Sbjct: 177 DIPLAGGPFTWIGG 190


>gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebennensis]
          Length = 464

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 58/191 (30%), Positives = 95/191 (49%), Gaps = 3/191 (1%)
 Frame = +2

Query: 38  LNIFCWNCRGISNRDTLDRIKDVQAHLNPSIICLLESKANTDRILHF--GAGFRKHWHWA 211
           +N   WNCRG +  +    I+ +    N  I+ L E+ A  DR      G GF   +   
Sbjct: 1   MNCLLWNCRGANKPNFRCSIRYILKKFNTDILALFETHAGGDREQRSCQGLGFENSFR-- 58

Query: 212 AIPAVGLSGGIVVLWSHTIGSVTPIVTSRWALHLAISTGSVDWVFTAIYNSQLLSDQKVL 391
            +  VG SGG+ +LW   +G VT + +S   +H  I  G        +Y +   S +  L
Sbjct: 59  -VDVVGQSGGLWLLWKAEVGEVTIVNSSSQFIHARIVNGVEALHLVTVYAAPSASRRSGL 117

Query: 392 WRHLAGLT-SLNLPWLLGGDFNAIVSSEEHRGGTFRNYAAKSLHFSDFIFNNALIDLSFS 568
           W  L  +  +++ P ++GGDFN I+ ++E  GG     +  S+ F +++ +  LID+ F 
Sbjct: 118 WEKLRDVVQAIDEPLIIGGDFNTIIRTDERIGGN-GQLSPDSVAFGNWVSDLFLIDMGFK 176

Query: 569 GSRFTWTNGQA 601
           G+R+TW  G+A
Sbjct: 177 GNRYTWKRGRA 187


>emb|CAN74319.1| hypothetical protein VITISV_035345 [Vitis vinifera]
          Length = 1802

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 60/196 (30%), Positives = 94/196 (47%), Gaps = 3/196 (1%)
 Frame = +2

Query: 20   LINLMNLNIFCWNCRGISNRDTLDRIKDVQAHLNPSIICLLESK-ANTDRILHFGAGFRK 196
            ++  +++ I  WN RG+ +R     +KD      P I+ + E+K A  DR         +
Sbjct: 774  VLKTLDIKIISWNTRGLGSRKKRRVVKDFLRSEKPDIVMIQETKKAECDRRFVGSLWTAR 833

Query: 197  HWHWAAIPAVGLSGGIVVLWSHTIGSVTPIVTSRWALHLAIST-GSVDWVFTAIYNSQLL 373
            +  WA +PA G SGGI+V+W         +V   +++ +  +  GS  +  +A+Y     
Sbjct: 834  NKEWAVLPACGASGGILVMWDSKKLHSEEVVLGSFSVSVKFAVDGSEQFWLSAVYGPNST 893

Query: 374  SDQKVLWRHLAGLTSLNLP-WLLGGDFNAIVSSEEHRGGTFRNYAAKSLHFSDFIFNNAL 550
            + +K  W  L+ +  L+ P W +GGDFN I    E  GG     + K L   DFI  N L
Sbjct: 894  ALRKDFWEELSDIFGLSSPCWCVGGDFNVIRRCSEKLGGGRLTPSMKDL--DDFIRENEL 951

Query: 551  IDLSFSGSRFTWTNGQ 598
            ID     + FTW+N Q
Sbjct: 952  IDPPLRSASFTWSNMQ 967


>emb|CAN74843.1| hypothetical protein VITISV_037042 [Vitis vinifera]
          Length = 1296

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 4/186 (2%)
 Frame = +2

Query: 50  CWNCRGISNRDTLDRIKDVQAHLNPSIICLLESKA-NTDRILHFGAGFRKHWHWAAIPAV 226
           C N RG+++ +    IK V  +  P ++CLLE+K     + L    G  +  +WA++ A 
Sbjct: 99  CSNVRGLNDSEKRKLIKGVVRNQKPDLVCLLETKVKEMSQQLVNSVGIGRFLNWASVDAR 158

Query: 227 GLSGGIVVLWSHTIGSVTPIVTSRWALHLAI--STGSVDWVFTAIYNSQLLSDQKVLWRH 400
           G +GG+++LW + +     +    +++ +          W+F+ +Y   + S+++  W  
Sbjct: 159 GTAGGLLLLWDNRVLENLEVERGGYSISIRFRNCVDGFTWIFSGVYGPVISSEKEDFWEE 218

Query: 401 LAGLTSL-NLPWLLGGDFNAIVSSEEHRGGTFRNYAAKSLHFSDFIFNNALIDLSFSGSR 577
           L+ +  L   PW LGGDFNA+   EE R         +   FS+ I    L DL  +G  
Sbjct: 219 LSAIRGLWEDPWCLGGDFNAVRFPEERRNSL--RLTTEMRRFSEVIGELGLKDLPLAGGP 276

Query: 578 FTWTNG 595
           FTW  G
Sbjct: 277 FTWIGG 282


>ref|XP_002273591.2| PREDICTED: uncharacterized protein LOC100254784 [Vitis vinifera]
          Length = 2201

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 60/188 (31%), Positives = 89/188 (47%), Gaps = 3/188 (1%)
 Frame = +2

Query: 44   IFCWNCRGISNRDTLDRIKDVQAHLNPSIICLLESK-ANTDRILHFGAGFRKHWHWAAIP 220
            I  WN RG+ +R     +KD      P I+ + E+K A  DR         ++  WA +P
Sbjct: 1341 IISWNTRGLGSRKKRRVVKDFLRSEKPDIVMIQETKKAECDRRFVGSLWTARNKEWAVLP 1400

Query: 221  AVGLSGGIVVLWSHTIGSVTPIVTSRWALHLAIST-GSVDWVFTAIYNSQLLSDQKVLWR 397
            A G SGGI+V+W         +V   +++ +  +  GS  +  +A+Y     + +K  W 
Sbjct: 1401 ACGASGGILVMWDSKKLHSEEVVLGSFSVSVKFAVDGSEQFWLSAVYGPNSTALRKDFWE 1460

Query: 398  HLAGLTSLNLP-WLLGGDFNAIVSSEEHRGGTFRNYAAKSLHFSDFIFNNALIDLSFSGS 574
             L+ +  L+ P W +GGDFN I    E  GG     + K L   DFI  N LID     +
Sbjct: 1461 ELSDIFGLSSPCWCVGGDFNVIRRCSEKLGGGRLTPSMKDL--DDFIRENELIDPPLRSA 1518

Query: 575  RFTWTNGQ 598
             FTW+N Q
Sbjct: 1519 SFTWSNMQ 1526


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