BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028957
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322465.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [...    97   2e-18
gb|AAT67046.1| DNA mismatch repair protein [Petunia x hybrida]         97   2e-18
ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-...    96   3e-18
emb|CBI31781.3| unnamed protein product [Vitis vinifera]               96   3e-18

>ref|XP_002322465.1| predicted protein [Populus trichocarpa] gi|222869461|gb|EEF06592.1|
           predicted protein [Populus trichocarpa]
          Length = 1092

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 47/78 (60%), Positives = 53/78 (67%)
 Frame = -3

Query: 235 RKQFGIRNLEFMCVSGITHLIELPLDTRVPTNWLKINSTKKAVRYHPPEVXXXXXXXXXX 56
           RKQ  +RNLEFM VSG THLIELPLD +VP NW+K+NSTKK +RYHPPEV          
Sbjct: 665 RKQLQMRNLEFMSVSGTTHLIELPLDFKVPLNWVKVNSTKKMIRYHPPEVLTALDQLLLA 724

Query: 55  XXXLNVVCRTAWDRFLMG 2
              L +V R AWD FL G
Sbjct: 725 NEELMIVSRAAWDSFLRG 742


>ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [Ricinus communis]
           gi|223549918|gb|EEF51405.1| DNA mismatch repair protein
           MSH3, putative [Ricinus communis]
          Length = 1100

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 47/76 (61%), Positives = 52/76 (68%)
 Frame = -3

Query: 235 RKQFGIRNLEFMCVSGITHLIELPLDTRVPTNWLKINSTKKAVRYHPPEVXXXXXXXXXX 56
           RKQ  +R+LEFM VSG THLIELP D +VP NW+KINSTKK +RYHPPEV          
Sbjct: 654 RKQLKMRSLEFMSVSGTTHLIELPADVKVPLNWVKINSTKKMIRYHPPEVLTALDQLALA 713

Query: 55  XXXLNVVCRTAWDRFL 8
              L VVCR AWD FL
Sbjct: 714 NEELMVVCRAAWDSFL 729


>gb|AAT67046.1| DNA mismatch repair protein [Petunia x hybrida]
          Length = 846

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 45/78 (57%), Positives = 56/78 (71%)
 Frame = -3

Query: 235 RKQFGIRNLEFMCVSGITHLIELPLDTRVPTNWLKINSTKKAVRYHPPEVXXXXXXXXXX 56
           RKQ  IRNLE+  V+GITHLIELPLDT+VP +W+K++STKKA+RYHP EV          
Sbjct: 391 RKQLHIRNLEYTSVAGITHLIELPLDTKVPPDWVKVSSTKKAIRYHPSEVVVALDELALA 450

Query: 55  XXXLNVVCRTAWDRFLMG 2
              L V+CR+AW+ FL G
Sbjct: 451 NEQLTVICRSAWNNFLAG 468


>ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-like [Vitis vinifera]
          Length = 1137

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 45/76 (59%), Positives = 52/76 (68%)
 Frame = -3

Query: 235 RKQFGIRNLEFMCVSGITHLIELPLDTRVPTNWLKINSTKKAVRYHPPEVXXXXXXXXXX 56
           RKQ  + NLEFM VSG THLIELP+D +VP+NW+K+NSTKK VRYHPPEV          
Sbjct: 663 RKQLRMNNLEFMSVSGTTHLIELPVDVKVPSNWVKVNSTKKTVRYHPPEVLSALDQLSLA 722

Query: 55  XXXLNVVCRTAWDRFL 8
              L + CR AWD FL
Sbjct: 723 NEELMIACRGAWDSFL 738


>emb|CBI31781.3| unnamed protein product [Vitis vinifera]
          Length = 903

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 45/76 (59%), Positives = 52/76 (68%)
 Frame = -3

Query: 235 RKQFGIRNLEFMCVSGITHLIELPLDTRVPTNWLKINSTKKAVRYHPPEVXXXXXXXXXX 56
           RKQ  + NLEFM VSG THLIELP+D +VP+NW+K+NSTKK VRYHPPEV          
Sbjct: 523 RKQLRMNNLEFMSVSGTTHLIELPVDVKVPSNWVKVNSTKKTVRYHPPEVLSALDQLSLA 582

Query: 55  XXXLNVVCRTAWDRFL 8
              L + CR AWD FL
Sbjct: 583 NEELMIACRGAWDSFL 598