BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028943
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134932.1| PREDICTED: pentatricopeptide repeat-containi...    67   1e-09
ref|XP_002528862.1| pentatricopeptide repeat-containing protein,...    61   1e-07
ref|XP_002509520.1| pentatricopeptide repeat-containing protein,...    59   4e-07

>ref|XP_004134932.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
           gi|449479547|ref|XP_004155632.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 638

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
 Frame = -3

Query: 241 QIHQAHAQLITLGLAARRAPMSHLLAHCALSPS-LPPSYPITIFNLIDIPNVFATNNLLR 65
           QI QAHA+++ LGLA      SHLLA  A+S S LP  Y ++I+N I  P VFATNN++R
Sbjct: 46  QIKQAHARILVLGLANDGRITSHLLAFLAISSSSLPSDYALSIYNSISHPTVFATNNMIR 105

Query: 64  CISRSVHPEKCLLFYSQL 11
           C  +   P   +  YS +
Sbjct: 106 CFVKGDLPRHSISLYSHM 123


>ref|XP_002528862.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531713|gb|EEF33536.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 374

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/76 (39%), Positives = 45/76 (59%)
 Frame = -3

Query: 238 IHQAHAQLITLGLAARRAPMSHLLAHCALSPSLPPSYPITIFNLIDIPNVFATNNLLRCI 59
           I Q HAQ I  G     + + HLL+  ALSP     Y  +++  I  P+VFA+NN++RC 
Sbjct: 39  IKQIHAQFIISGFTGHASLLGHLLSLLALSPENQFHYSYSVYQSIKNPSVFASNNMIRCF 98

Query: 58  SRSVHPEKCLLFYSQL 11
           S+S  P + ++FYS +
Sbjct: 99  SKSELPLESVVFYSSM 114


>ref|XP_002509520.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549419|gb|EEF50907.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 413

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/77 (37%), Positives = 44/77 (57%)
 Frame = -3

Query: 241 QIHQAHAQLITLGLAARRAPMSHLLAHCALSPSLPPSYPITIFNLIDIPNVFATNNLLRC 62
           Q+ Q HAQ+I     +     S LL+ CALS S   +Y I +F  I  PN+F  N ++R 
Sbjct: 64  QLKQIHAQMILTSRISDHFAASRLLSFCALSNSRDINYAIKLFKSIQDPNIFMWNTIIRA 123

Query: 61  ISRSVHPEKCLLFYSQL 11
           ++ S +P++ L FY Q+
Sbjct: 124 LANSSNPDQALFFYIQM 140