BLASTX nr result

ID: Dioscorea21_contig00028942 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028942
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003564760.1| PREDICTED: PHD finger protein At1g33420-like...   148   5e-34
gb|EAY76692.1| hypothetical protein OsI_04645 [Oryza sativa Indi...   147   9e-34
ref|NP_001044975.1| Os01g0877500 [Oryza sativa Japonica Group] g...   146   2e-33
ref|XP_002456731.1| hypothetical protein SORBIDRAFT_03g041550 [S...   144   7e-33
ref|XP_002893768.1| PHD finger family protein [Arabidopsis lyrat...   139   3e-31

>ref|XP_003564760.1| PREDICTED: PHD finger protein At1g33420-like [Brachypodium
           distachyon]
          Length = 717

 Score =  148 bits (373), Expect = 5e-34
 Identities = 74/132 (56%), Positives = 94/132 (71%)
 Frame = +1

Query: 4   EAQNHIPSNPFALQVWCHVELVDQPKDYTAPPPELLILPSAATVWDLKIQATKAFQETYL 183
           E     PSNPF L V C +EL+D PKDYTAPP EL++LP++AT+ +LKIQA +AFQETYL
Sbjct: 503 ECDPQTPSNPFLLSVKCTIELLDHPKDYTAPPVELVLLPASATLAELKIQAARAFQETYL 562

Query: 184 MFQRFQAENLLGHGDVKDMSVKDTIQVKHLIGVNMSVCIRGRCLLGEGRTLEHFRMERGI 363
           MFQ FQAE L        ++  D+  VKH++G +  V +RGRC  G+ R +  FRMERG+
Sbjct: 563 MFQSFQAEQLPDF-----LNFSDSTPVKHVLGSSQLVRVRGRC-TGDHRRIVQFRMERGL 616

Query: 364 EMWTVDCSCGAK 399
           E WTVDC+CGAK
Sbjct: 617 ENWTVDCTCGAK 628


>gb|EAY76692.1| hypothetical protein OsI_04645 [Oryza sativa Indica Group]
          Length = 716

 Score =  147 bits (371), Expect = 9e-34
 Identities = 75/126 (59%), Positives = 93/126 (73%)
 Frame = +1

Query: 22  PSNPFALQVWCHVELVDQPKDYTAPPPELLILPSAATVWDLKIQATKAFQETYLMFQRFQ 201
           P NPF L V C +EL+D PKDYTAPP EL++LP++AT+ +LKIQAT+AFQETYLMFQ FQ
Sbjct: 509 PLNPFLLSVRCSIELLDHPKDYTAPPVELVLLPASATLAELKIQATRAFQETYLMFQSFQ 568

Query: 202 AENLLGHGDVKDMSVKDTIQVKHLIGVNMSVCIRGRCLLGEGRTLEHFRMERGIEMWTVD 381
            E L    D  + S  DT  VKH++G +  V +RGRC  G+ R +  FRMERG+E WTVD
Sbjct: 569 VEQL---PDFPNFS--DTTLVKHVLGSSQLVRVRGRC-TGDNRRIVQFRMERGLENWTVD 622

Query: 382 CSCGAK 399
           C+CGAK
Sbjct: 623 CTCGAK 628


>ref|NP_001044975.1| Os01g0877500 [Oryza sativa Japonica Group]
           gi|22202666|dbj|BAC07324.1| putative male sterility 1
           protein [Oryza sativa Japonica Group]
           gi|113534506|dbj|BAF06889.1| Os01g0877500 [Oryza sativa
           Japonica Group] gi|125572842|gb|EAZ14357.1| hypothetical
           protein OsJ_04277 [Oryza sativa Japonica Group]
           gi|215704870|dbj|BAG94898.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 716

 Score =  146 bits (368), Expect = 2e-33
 Identities = 74/126 (58%), Positives = 93/126 (73%)
 Frame = +1

Query: 22  PSNPFALQVWCHVELVDQPKDYTAPPPELLILPSAATVWDLKIQATKAFQETYLMFQRFQ 201
           P NPF L V C +EL+D PKDYTAPP EL++LP++AT+ +LKIQAT+AFQETYLMFQ +Q
Sbjct: 509 PLNPFLLSVRCSIELLDHPKDYTAPPVELVLLPASATLAELKIQATRAFQETYLMFQSYQ 568

Query: 202 AENLLGHGDVKDMSVKDTIQVKHLIGVNMSVCIRGRCLLGEGRTLEHFRMERGIEMWTVD 381
            E L    D  + S  DT  VKH++G +  V +RGRC  G+ R +  FRMERG+E WTVD
Sbjct: 569 VEQL---PDFPNFS--DTTLVKHVLGSSQLVRVRGRC-TGDNRRIVQFRMERGLENWTVD 622

Query: 382 CSCGAK 399
           C+CGAK
Sbjct: 623 CTCGAK 628


>ref|XP_002456731.1| hypothetical protein SORBIDRAFT_03g041550 [Sorghum bicolor]
           gi|241928706|gb|EES01851.1| hypothetical protein
           SORBIDRAFT_03g041550 [Sorghum bicolor]
          Length = 710

 Score =  144 bits (363), Expect = 7e-33
 Identities = 73/126 (57%), Positives = 91/126 (72%)
 Frame = +1

Query: 22  PSNPFALQVWCHVELVDQPKDYTAPPPELLILPSAATVWDLKIQATKAFQETYLMFQRFQ 201
           PSNP+ L V C +EL+D PKDYT PP EL++LP++AT+ DLK+QA+KAFQETYLMFQ FQ
Sbjct: 504 PSNPYLLCVRCSIELLDHPKDYTTPPEELVLLPASATLGDLKVQASKAFQETYLMFQSFQ 563

Query: 202 AENLLGHGDVKDMSVKDTIQVKHLIGVNMSVCIRGRCLLGEGRTLEHFRMERGIEMWTVD 381
            E L    D  + S  DT  V H++G    + +RGRC  G+ R +  FRMERG+E WTVD
Sbjct: 564 TEQL---PDFPNFS--DTTPVNHVLGSGQLLRVRGRC-TGDYRRIVQFRMERGLENWTVD 617

Query: 382 CSCGAK 399
           CSCGAK
Sbjct: 618 CSCGAK 623


>ref|XP_002893768.1| PHD finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297339610|gb|EFH70027.1| PHD finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 697

 Score =  139 bits (349), Expect = 3e-31
 Identities = 68/125 (54%), Positives = 86/125 (68%)
 Frame = +1

Query: 25  SNPFALQVWCHVELVDQPKDYTAPPPELLILPSAATVWDLKIQATKAFQETYLMFQRFQA 204
           +NPFA+ +WCHVEL D+ K+  APPPELL+LP  ATV DLKI+A KAFQE Y MF+RF+ 
Sbjct: 495 ANPFAISLWCHVELSDESKECPAPPPELLVLPLNATVSDLKIEAAKAFQEVYAMFKRFEV 554

Query: 205 ENLLGHGDVKDMSVKDTIQVKHLIGVNMSVCIRGRCLLGEGRTLEHFRMERGIEMWTVDC 384
           E LLG+G     S+ D I +K L+G N  + I+GRC       L  +RMERG++ W VDC
Sbjct: 555 EELLGYG-----SIDDFITLKFLVGTNGVIRIKGRC---SKHGLLRYRMERGVDNWKVDC 606

Query: 385 SCGAK 399
            CG K
Sbjct: 607 KCGTK 611


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