BLASTX nr result

ID: Dioscorea21_contig00028929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028929
         (799 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30307.3| unnamed protein product [Vitis vinifera]              311   1e-83
ref|XP_002276489.1| PREDICTED: ABC transporter B family member 2...   311   1e-83
ref|XP_002308470.1| ABC transporter family, retinal flippase sub...   311   8e-83
ref|XP_002530326.1| abc transporter, putative [Ricinus communis]...   310   2e-82
ref|XP_003537071.1| PREDICTED: ABC transporter B family member 2...   298   9e-79

>emb|CBI30307.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  311 bits (798), Expect(2) = 1e-83
 Identities = 158/254 (62%), Positives = 197/254 (77%)
 Frame = +1

Query: 37   LQSTVPNTLQLIAMASQMINISPVLSLASGMAFPCMFLIMTYLGDWLRRVSNKAQLTAAM 216
            L + VP+ LQL AMA+QM+ ISP LSL S +  P M L++ +LG+ LR++S +A L+ A 
Sbjct: 286  LNTIVPSALQLSAMATQMLFISPTLSLISALVIPFMSLVIAHLGERLRKISKRAHLSIAA 345

Query: 217  LAAYLNEVLPSMLFEKANNGRLIEGYRFQRLAHDDLMGRLGKKKMKALIPQIIQVIYIAG 396
            L+AYLNE+LPS+LF KA+N  L E  RF+RLAH DL  RL K+KMKALIPQI+Q+IY   
Sbjct: 346  LSAYLNEILPSILFVKASNAELSESARFRRLAHTDLSERLKKRKMKALIPQIMQIIYFGA 405

Query: 397  LLVLCGSTLALSRTSFDMSKFFSFVTSLALLIEPIQGVGKAYNELKQGEPAIERLFDLTR 576
            L +    +L +   + D S   SFVTSL LLI+PIQGVGKAYNELKQGEPAIERLFDLTR
Sbjct: 406  LSIFFVGSLVVPSGALDGSLLVSFVTSLVLLIDPIQGVGKAYNELKQGEPAIERLFDLTR 465

Query: 577  FSSKVIEKSNAVDLDRVSGDIKFSGVTFKYAENLPLVLNELDLHIKAGETVAFIGPSGGG 756
            F S+V+EK +AVDLD V G++KF  ++F+Y + +PL+LN LDLHIKAGETVA +GPSGGG
Sbjct: 466  FESQVLEKPDAVDLDSVIGEVKFCNISFRYGDRMPLILNGLDLHIKAGETVALVGPSGGG 525

Query: 757  KTSLAKLLLRLYDP 798
            KT+L KLLLRLYDP
Sbjct: 526  KTTLVKLLLRLYDP 539



 Score = 25.4 bits (54), Expect(2) = 1e-83
 Identities = 10/12 (83%), Positives = 12/12 (100%)
 Frame = +2

Query: 2   SDIAETVHALLN 37
           SD+A+TVHALLN
Sbjct: 276 SDVADTVHALLN 287


>ref|XP_002276489.1| PREDICTED: ABC transporter B family member 29, chloroplastic [Vitis
           vinifera]
          Length = 630

 Score =  311 bits (798), Expect(2) = 1e-83
 Identities = 158/254 (62%), Positives = 197/254 (77%)
 Frame = +1

Query: 37  LQSTVPNTLQLIAMASQMINISPVLSLASGMAFPCMFLIMTYLGDWLRRVSNKAQLTAAM 216
           L + VP+ LQL AMA+QM+ ISP LSL S +  P M L++ +LG+ LR++S +A L+ A 
Sbjct: 192 LNTIVPSALQLSAMATQMLFISPTLSLISALVIPFMSLVIAHLGERLRKISKRAHLSIAA 251

Query: 217 LAAYLNEVLPSMLFEKANNGRLIEGYRFQRLAHDDLMGRLGKKKMKALIPQIIQVIYIAG 396
           L+AYLNE+LPS+LF KA+N  L E  RF+RLAH DL  RL K+KMKALIPQI+Q+IY   
Sbjct: 252 LSAYLNEILPSILFVKASNAELSESARFRRLAHTDLSERLKKRKMKALIPQIMQIIYFGA 311

Query: 397 LLVLCGSTLALSRTSFDMSKFFSFVTSLALLIEPIQGVGKAYNELKQGEPAIERLFDLTR 576
           L +    +L +   + D S   SFVTSL LLI+PIQGVGKAYNELKQGEPAIERLFDLTR
Sbjct: 312 LSIFFVGSLVVPSGALDGSLLVSFVTSLVLLIDPIQGVGKAYNELKQGEPAIERLFDLTR 371

Query: 577 FSSKVIEKSNAVDLDRVSGDIKFSGVTFKYAENLPLVLNELDLHIKAGETVAFIGPSGGG 756
           F S+V+EK +AVDLD V G++KF  ++F+Y + +PL+LN LDLHIKAGETVA +GPSGGG
Sbjct: 372 FESQVLEKPDAVDLDSVIGEVKFCNISFRYGDRMPLILNGLDLHIKAGETVALVGPSGGG 431

Query: 757 KTSLAKLLLRLYDP 798
           KT+L KLLLRLYDP
Sbjct: 432 KTTLVKLLLRLYDP 445



 Score = 25.4 bits (54), Expect(2) = 1e-83
 Identities = 10/12 (83%), Positives = 12/12 (100%)
 Frame = +2

Query: 2   SDIAETVHALLN 37
           SD+A+TVHALLN
Sbjct: 182 SDVADTVHALLN 193


>ref|XP_002308470.1| ABC transporter family, retinal flippase subfamily [Populus
           trichocarpa] gi|222854446|gb|EEE91993.1| ABC transporter
           family, retinal flippase subfamily [Populus trichocarpa]
          Length = 570

 Score =  311 bits (798), Expect = 8e-83
 Identities = 159/254 (62%), Positives = 192/254 (75%)
 Frame = +1

Query: 37  LQSTVPNTLQLIAMASQMINISPVLSLASGMAFPCMFLIMTYLGDWLRRVSNKAQLTAAM 216
           L + VP+ LQL AMAS+M+ ISP LSL S M  PC  L + YLG  LR++S KAQLT + 
Sbjct: 133 LNTIVPSALQLSAMASRMLVISPALSLISAMVIPCTALAIAYLGTRLRKISKKAQLTISA 192

Query: 217 LAAYLNEVLPSMLFEKANNGRLIEGYRFQRLAHDDLMGRLGKKKMKALIPQIIQVIYIAG 396
           L+AYLNEVLP++LF KA+N    E  RF+RLA+ DL   L K+KMKA IPQI+Q+IY   
Sbjct: 193 LSAYLNEVLPAILFVKASNAEFCEIARFERLAYADLSALLTKRKMKAFIPQIVQIIYFGA 252

Query: 397 LLVLCGSTLALSRTSFDMSKFFSFVTSLALLIEPIQGVGKAYNELKQGEPAIERLFDLTR 576
           L +LC  ++ +S   FD     SF+TSL  ++EPIQ VGKAYNE KQGEPAIERLFDLTR
Sbjct: 253 LSILCVGSMVVSSGCFDGCSMVSFITSLIFVVEPIQDVGKAYNEWKQGEPAIERLFDLTR 312

Query: 577 FSSKVIEKSNAVDLDRVSGDIKFSGVTFKYAENLPLVLNELDLHIKAGETVAFIGPSGGG 756
           F SKV EK +AVDLD VSGD+KF  ++F+Y EN PLVLN L+LHIKAGETVA +GPSGGG
Sbjct: 313 FKSKVTEKPDAVDLDHVSGDVKFCDISFRYGENSPLVLNGLNLHIKAGETVALVGPSGGG 372

Query: 757 KTSLAKLLLRLYDP 798
           KT+L K+LLRLYDP
Sbjct: 373 KTTLIKMLLRLYDP 386


>ref|XP_002530326.1| abc transporter, putative [Ricinus communis]
           gi|223530130|gb|EEF32042.1| abc transporter, putative
           [Ricinus communis]
          Length = 650

 Score =  310 bits (795), Expect = 2e-82
 Identities = 161/254 (63%), Positives = 188/254 (74%)
 Frame = +1

Query: 37  LQSTVPNTLQLIAMASQMINISPVLSLASGMAFPCMFLIMTYLGDWLRRVSNKAQLTAAM 216
           L + +P+ LQL AMAS+M+ ISPVLSL S M  PCM   +  LG+ LR++S KA L+ A 
Sbjct: 211 LNTVLPSALQLSAMASRMLAISPVLSLISAMVIPCMAFAIACLGERLRKISKKAHLSIAT 270

Query: 217 LAAYLNEVLPSMLFEKANNGRLIEGYRFQRLAHDDLMGRLGKKKMKALIPQIIQVIYIAG 396
           L+AYLNEVLP++LF KANNG L E  RFQRLAH DL     KK MK LIPQIIQ+IY   
Sbjct: 271 LSAYLNEVLPAILFVKANNGELCESARFQRLAHADLTEHFKKKNMKVLIPQIIQIIYFGA 330

Query: 397 LLVLCGSTLALSRTSFDMSKFFSFVTSLALLIEPIQGVGKAYNELKQGEPAIERLFDLTR 576
           L +LC  ++ +S   FD     SFVTSL  L+EPIQ VGKAYNE KQGEPAIERLFDLT 
Sbjct: 331 LFMLCCGSMVVSCGCFDGCSMVSFVTSLVFLVEPIQDVGKAYNEWKQGEPAIERLFDLTM 390

Query: 577 FSSKVIEKSNAVDLDRVSGDIKFSGVTFKYAENLPLVLNELDLHIKAGETVAFIGPSGGG 756
             SKVIEK+ AVDLD V GD+KF  V+F+Y +N  LVLN L+LHIKAGET+A IGPSGGG
Sbjct: 391 LKSKVIEKTEAVDLDHVIGDVKFCDVSFRYGDNSSLVLNRLNLHIKAGETIALIGPSGGG 450

Query: 757 KTSLAKLLLRLYDP 798
           KT+L KLLL LYDP
Sbjct: 451 KTTLVKLLLHLYDP 464


>ref|XP_003537071.1| PREDICTED: ABC transporter B family member 29, chloroplastic-like
           [Glycine max]
          Length = 605

 Score =  298 bits (763), Expect = 9e-79
 Identities = 154/254 (60%), Positives = 190/254 (74%)
 Frame = +1

Query: 37  LQSTVPNTLQLIAMASQMINISPVLSLASGMAFPCMFLIMTYLGDWLRRVSNKAQLTAAM 216
           L + VP+TLQL AM  QM+ ISP LSL S M  PCM L++T+LG  LR++S +A ++ A 
Sbjct: 166 LNTIVPSTLQLSAMMMQMLVISPTLSLISAMIVPCMVLVVTFLGQELRKISKEAHVSIAA 225

Query: 217 LAAYLNEVLPSMLFEKANNGRLIEGYRFQRLAHDDLMGRLGKKKMKALIPQIIQVIYIAG 396
           L+AYLNEVLP++LF KANN +  E  RF+RLA  D   RL KKKMKALIPQ+IQ IY   
Sbjct: 226 LSAYLNEVLPAILFVKANNAQSCENTRFKRLALMDYNARLKKKKMKALIPQVIQAIYFGV 285

Query: 397 LLVLCGSTLALSRTSFDMSKFFSFVTSLALLIEPIQGVGKAYNELKQGEPAIERLFDLTR 576
           L +LC  +L +SR S D     SFVTSL  LI+PIQ VGKAYNE +QGEPA ERL  +TR
Sbjct: 286 LSILCAGSLMISRGSLDRYSLVSFVTSLLFLIQPIQDVGKAYNEWRQGEPAAERLLAMTR 345

Query: 577 FSSKVIEKSNAVDLDRVSGDIKFSGVTFKYAENLPLVLNELDLHIKAGETVAFIGPSGGG 756
           F +KV+EK +A DLDRV+GD+KF  V+F Y +++ LVLN L+LHIK+GE VA +GPSGGG
Sbjct: 346 FKNKVVEKPDAADLDRVTGDLKFCDVSFGYNDDMALVLNALNLHIKSGEIVAIVGPSGGG 405

Query: 757 KTSLAKLLLRLYDP 798
           KT+L KLLLRLYDP
Sbjct: 406 KTTLVKLLLRLYDP 419


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