BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028904
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containi...   178   5e-43
emb|CBI39966.3| unnamed protein product [Vitis vinifera]              178   5e-43
emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]   178   5e-43
ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containi...   173   1e-41
ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containi...   173   1e-41

>ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Vitis vinifera]
          Length = 889

 Score =  178 bits (451), Expect = 5e-43
 Identities = 83/129 (64%), Positives = 106/129 (82%)
 Frame = -2

Query: 391 KVFELINMKDIVTWTSLVSAYGMYGQGENALRAFTKMEEEGIVPDHVAFVAVLFACSHAG 212
           +VF+L+  KD+VTWT+L+SA GMYG+G+ A+RAF +ME  GIVPDHVAFVA++FACSH+G
Sbjct: 573 QVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSG 632

Query: 211 RVKEGKLLFKKMEHDYMIIPRMEHYACMVDLFSRSGKLDEAEVFIKSMPFEPDVTIWGAL 32
            V+EG   F +M+ DY I PR+EHYAC+VDL SRS  LD+AE FI SMP +PD +IWGAL
Sbjct: 633 LVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGAL 692

Query: 31  LSACRTTGE 5
           LSACR +G+
Sbjct: 693 LSACRMSGD 701



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 32/165 (19%)
 Frame = -2

Query: 403 DYAVKVFELINMKDIVTWTSLVSAYGMYGQGENALRAFTKMEEEGIVPDHVAFVAVLFAC 224
           D A KVFE + ++D+V+W SL+S Y   G    AL  + +    G+VPD     +VL AC
Sbjct: 167 DKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRAC 226

Query: 223 SHAGRVKEGKLLFKKME------------------------------HDYMIIPRMEHYA 134
              G V+EG ++   +E                               D M++     + 
Sbjct: 227 GGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWN 286

Query: 133 CMVDLFSRSGKLDEAEVFIKSM--PFEPDVTIWGALLSACRTTGE 5
            M+  +S+ G  +E+      M   F+PD+    ++L AC   G+
Sbjct: 287 TMICGYSQVGLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGD 331



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 5/136 (3%)
 Frame = -2

Query: 397 AVKVFELINMKDIVTWTSLVSAYGMYGQGENALRAFTKMEEEGIVPDHVAFVAVLFACSH 218
           ++KVFE +  +DI+TW +++++          LR  ++M  EG+ PD    +++L  CS 
Sbjct: 470 SLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSL 529

Query: 217 AGRVKEGK----LLFK-KMEHDYMIIPRMEHYACMVDLFSRSGKLDEAEVFIKSMPFEPD 53
               ++GK     +FK  +E D  +         +++++S+ G L  +    K M  + D
Sbjct: 530 LAAKRQGKEIHGCIFKLGLESDVPV------GNVLIEMYSKCGSLRNSFQVFKLMKTK-D 582

Query: 52  VTIWGALLSACRTTGE 5
           V  W AL+SAC   GE
Sbjct: 583 VVTWTALISACGMYGE 598


>emb|CBI39966.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score =  178 bits (451), Expect = 5e-43
 Identities = 83/129 (64%), Positives = 106/129 (82%)
 Frame = -2

Query: 391 KVFELINMKDIVTWTSLVSAYGMYGQGENALRAFTKMEEEGIVPDHVAFVAVLFACSHAG 212
           +VF+L+  KD+VTWT+L+SA GMYG+G+ A+RAF +ME  GIVPDHVAFVA++FACSH+G
Sbjct: 410 QVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSG 469

Query: 211 RVKEGKLLFKKMEHDYMIIPRMEHYACMVDLFSRSGKLDEAEVFIKSMPFEPDVTIWGAL 32
            V+EG   F +M+ DY I PR+EHYAC+VDL SRS  LD+AE FI SMP +PD +IWGAL
Sbjct: 470 LVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGAL 529

Query: 31  LSACRTTGE 5
           LSACR +G+
Sbjct: 530 LSACRMSGD 538



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 5/136 (3%)
 Frame = -2

Query: 397 AVKVFELINMKDIVTWTSLVSAYGMYGQGENALRAFTKMEEEGIVPDHVAFVAVLFACSH 218
           ++KVFE +  +DI+TW +++++          LR  ++M  EG+ PD    +++L  CS 
Sbjct: 307 SLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSL 366

Query: 217 AGRVKEGK----LLFK-KMEHDYMIIPRMEHYACMVDLFSRSGKLDEAEVFIKSMPFEPD 53
               ++GK     +FK  +E D  +         +++++S+ G L  +    K M  + D
Sbjct: 367 LAAKRQGKEIHGCIFKLGLESDVPV------GNVLIEMYSKCGSLRNSFQVFKLMKTK-D 419

Query: 52  VTIWGALLSACRTTGE 5
           V  W AL+SAC   GE
Sbjct: 420 VVTWTALISACGMYGE 435



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 14/147 (9%)
 Frame = -2

Query: 403 DYAVKVFELINMKDIVTWTSLVSAYGMYGQGENAL-------RAFTKMEEEGIVPDHVAF 245
           D A KVFE + ++D+V+W SL+S Y   G    AL       + F +M  +   PD +  
Sbjct: 167 DKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMVNQ-FKPDLLTI 225

Query: 244 VAVLFACSHAGRVKEGKLLFKKMEHDYMIIPRMEHYAC-------MVDLFSRSGKLDEAE 86
            ++L AC H G ++ GK +     HDYMI      Y C       +++++++ G L  ++
Sbjct: 226 TSILQACGHLGDLEFGKYV-----HDYMI---TSGYECDTTASNILINMYAKCGNLLASQ 277

Query: 85  VFIKSMPFEPDVTIWGALLSACRTTGE 5
                M  +  V+ W ++++     G+
Sbjct: 278 EVFSGMKCKDSVS-WNSMINVYIQNGK 303


>emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
          Length = 948

 Score =  178 bits (451), Expect = 5e-43
 Identities = 83/129 (64%), Positives = 106/129 (82%)
 Frame = -2

Query: 391  KVFELINMKDIVTWTSLVSAYGMYGQGENALRAFTKMEEEGIVPDHVAFVAVLFACSHAG 212
            +VF+L+  KD+VTWT+L+SA GMYG+G+ A+RAF +ME  GIVPDHVAFVA++FACSH+G
Sbjct: 632  QVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSG 691

Query: 211  RVKEGKLLFKKMEHDYMIIPRMEHYACMVDLFSRSGKLDEAEVFIKSMPFEPDVTIWGAL 32
             V+EG   F +M+ DY I PR+EHYAC+VDL SRS  LD+AE FI SMP +PD +IWGAL
Sbjct: 692  LVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGAL 751

Query: 31   LSACRTTGE 5
            LSACR +G+
Sbjct: 752  LSACRMSGD 760



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 32/165 (19%)
 Frame = -2

Query: 403 DYAVKVFELINMKDIVTWTSLVSAYGMYGQGENALRAFTKMEEEGIVPDHVAFVAVLFAC 224
           D A KVFE + ++D+V+W SL+S Y   G    AL  + +    G+VPD     +VL AC
Sbjct: 226 DKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRAC 285

Query: 223 SHAGRVKEGKLLFKKME------------------------------HDYMIIPRMEHYA 134
              G V+EG ++   +E                               D M++     + 
Sbjct: 286 GGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWN 345

Query: 133 CMVDLFSRSGKLDEAEVFIKSM--PFEPDVTIWGALLSACRTTGE 5
            M+  +S+ G  +E+      M   F+PD+    ++L AC   G+
Sbjct: 346 TMICGYSQVGLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGD 390



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 5/136 (3%)
 Frame = -2

Query: 397 AVKVFELINMKDIVTWTSLVSAYGMYGQGENALRAFTKMEEEGIVPDHVAFVAVLFACSH 218
           ++KVFE +  +DI+TW +++++          LR  ++M  EG+ PD    +++L  CS 
Sbjct: 529 SLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSL 588

Query: 217 AGRVKEGK----LLFK-KMEHDYMIIPRMEHYACMVDLFSRSGKLDEAEVFIKSMPFEPD 53
               ++GK     +FK  +E D  +         +++++S+ G L  +    K M  + D
Sbjct: 589 LAAKRQGKEIHGCIFKLGLESDVPV------GNVLIEMYSKCGSLRNSFQVFKLMKTK-D 641

Query: 52  VTIWGALLSACRTTGE 5
           V  W AL+SAC   GE
Sbjct: 642 VVTWTALISACGMYGE 657


>ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 939

 Score =  173 bits (438), Expect = 1e-41
 Identities = 78/129 (60%), Positives = 102/129 (79%)
 Frame = -2

Query: 394 VKVFELINMKDIVTWTSLVSAYGMYGQGENALRAFTKMEEEGIVPDHVAFVAVLFACSHA 215
           +KVF+ +  KD+VTWT+L+SA+GMYG+G+ AL+AF  ME  G++PD VAF+A +FACSH+
Sbjct: 578 IKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHS 637

Query: 214 GRVKEGKLLFKKMEHDYMIIPRMEHYACMVDLFSRSGKLDEAEVFIKSMPFEPDVTIWGA 35
           G VKEG   F +M+ DY + PRMEHYAC+VDL +RSG L +AE FI SMP +PD ++WGA
Sbjct: 638 GMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGA 697

Query: 34  LLSACRTTG 8
           LLSACR  G
Sbjct: 698 LLSACRARG 706



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 37/134 (27%), Positives = 70/134 (52%), Gaps = 4/134 (2%)
 Frame = -2

Query: 397 AVKVFELINMKDIVTWTSLVSAYGMYGQGENALRAFTKMEEEGIVPDHVAFVAVLFACSH 218
           A +VF  + +KD VTW +++  Y   G+ E +++ F  M  +G VPD ++  + + AC  
Sbjct: 276 ARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDM-IDGFVPDMLSITSTIRACGQ 334

Query: 217 AGRVKEGKLLFKKMEHDYMIIPRME--HYAC--MVDLFSRSGKLDEAEVFIKSMPFEPDV 50
           +G ++ GK +     H Y+I    E    AC  ++D++++ G L  A+    +   +  V
Sbjct: 335 SGDLQVGKFV-----HKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSV 389

Query: 49  TIWGALLSACRTTG 8
           T W +L++    +G
Sbjct: 390 T-WNSLINGYTQSG 402



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 4/137 (2%)
 Frame = -2

Query: 403 DYAVKVFELINMKDIVTWTSLVSAYGMYGQGENALRAFTKMEEEGIVPDHVAFVAVLFAC 224
           D  +KVF  ++  DI++W +++++   +       +   +M  EG++PD    + +L  C
Sbjct: 474 DDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMC 533

Query: 223 SHAGRVKEGKLLFKKMEHDYMIIPRMEHYA----CMVDLFSRSGKLDEAEVFIKSMPFEP 56
           S     ++GK +     H Y+     E        +++++S+ G L+      K M  E 
Sbjct: 534 SLLAVRRQGKEI-----HGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMK-EK 587

Query: 55  DVTIWGALLSACRTTGE 5
           DV  W AL+SA    GE
Sbjct: 588 DVVTWTALISAFGMYGE 604


>ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 895

 Score =  173 bits (438), Expect = 1e-41
 Identities = 78/129 (60%), Positives = 102/129 (79%)
 Frame = -2

Query: 394 VKVFELINMKDIVTWTSLVSAYGMYGQGENALRAFTKMEEEGIVPDHVAFVAVLFACSHA 215
           +KVF+ +  KD+VTWT+L+SA+GMYG+G+ AL+AF  ME  G++PD VAF+A +FACSH+
Sbjct: 578 IKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHS 637

Query: 214 GRVKEGKLLFKKMEHDYMIIPRMEHYACMVDLFSRSGKLDEAEVFIKSMPFEPDVTIWGA 35
           G VKEG   F +M+ DY + PRMEHYAC+VDL +RSG L +AE FI SMP +PD ++WGA
Sbjct: 638 GMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGA 697

Query: 34  LLSACRTTG 8
           LLSACR  G
Sbjct: 698 LLSACRARG 706



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 37/134 (27%), Positives = 70/134 (52%), Gaps = 4/134 (2%)
 Frame = -2

Query: 397 AVKVFELINMKDIVTWTSLVSAYGMYGQGENALRAFTKMEEEGIVPDHVAFVAVLFACSH 218
           A +VF  + +KD VTW +++  Y   G+ E +++ F  M  +G VPD ++  + + AC  
Sbjct: 276 ARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDM-IDGFVPDMLSITSTIRACGQ 334

Query: 217 AGRVKEGKLLFKKMEHDYMIIPRME--HYAC--MVDLFSRSGKLDEAEVFIKSMPFEPDV 50
           +G ++ GK +     H Y+I    E    AC  ++D++++ G L  A+    +   +  V
Sbjct: 335 SGDLQVGKFV-----HKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSV 389

Query: 49  TIWGALLSACRTTG 8
           T W +L++    +G
Sbjct: 390 T-WNSLINGYTQSG 402



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 4/137 (2%)
 Frame = -2

Query: 403 DYAVKVFELINMKDIVTWTSLVSAYGMYGQGENALRAFTKMEEEGIVPDHVAFVAVLFAC 224
           D  +KVF  ++  DI++W +++++   +       +   +M  EG++PD    + +L  C
Sbjct: 474 DDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMC 533

Query: 223 SHAGRVKEGKLLFKKMEHDYMIIPRMEHYA----CMVDLFSRSGKLDEAEVFIKSMPFEP 56
           S     ++GK +     H Y+     E        +++++S+ G L+      K M  E 
Sbjct: 534 SLLAVRRQGKEI-----HGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMK-EK 587

Query: 55  DVTIWGALLSACRTTGE 5
           DV  W AL+SA    GE
Sbjct: 588 DVVTWTALISAFGMYGE 604