BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028895
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284396.1| PREDICTED: pentatricopeptide repeat-containi...   202   2e-50
emb|CAN65641.1| hypothetical protein VITISV_018600 [Vitis vinifera]   202   2e-50
ref|XP_003527928.1| PREDICTED: pentatricopeptide repeat-containi...   190   1e-46
ref|XP_002301008.1| predicted protein [Populus trichocarpa] gi|2...   189   2e-46
ref|XP_003601089.1| Pentatricopeptide repeat-containing protein ...   174   6e-42

>ref|XP_002284396.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g08210-like [Vitis vinifera]
          Length = 690

 Score =  202 bits (514), Expect = 2e-50
 Identities = 104/175 (59%), Positives = 127/175 (72%)
 Frame = +1

Query: 1   TALISAHIYAGEPFEALRVFDQMLESGLEEPNGFTFSAALKACGLLRDIEYGRWIHELVS 180
           T +ISA+  +G P  AL+ + QMLES  E PNGF +SA LKACGL+ D+E G+ IH  V 
Sbjct: 73  TTMISAYSSSGRPDTALKFYVQMLESKSETPNGFLYSAVLKACGLVGDLESGKLIHGRVF 132

Query: 181 RAGLLFDTVLMNSVLDMYVKCGSVKEAARVFDEIFPGNFTSWNTMIAGYCKEGNMIEAEE 360
           RA L FDTVLMN++LDMYVKCGS+  A +VFD+I   + TSWNTMI+GY KEG M EA  
Sbjct: 133 RANLGFDTVLMNTLLDMYVKCGSLSSARKVFDDILCPSSTSWNTMISGYGKEGLMEEAVN 192

Query: 361 LFRRVPEHDGVSFNSLIAGFAQKESPKASEYVCLMHKLGFKLDHFTIPCALNTCG 525
           LF ++PE D VS+NS+IAGF  KES  A  +VC+MH+ G KLD FT  CAL TCG
Sbjct: 193 LFYQMPEPDTVSWNSIIAGFGCKESLGALRFVCMMHRKGLKLDGFTFSCALKTCG 247



 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 29/100 (29%), Positives = 50/100 (50%)
 Frame = +1

Query: 112 AALKACGLLRDIEYGRWIHELVSRAGLLFDTVLMNSVLDMYVKCGSVKEAARVFDEIFPG 291
           + ++ CG  R   +GR +H  + + G+  D    N++L MYV    +K+A R+FDE    
Sbjct: 8   SVIRQCGRFRAFRHGRSLHAHIIKLGVFNDVFFANNLLAMYVDISLLKDARRLFDETLER 67

Query: 292 NFTSWNTMIAGYCKEGNMIEAEELFRRVPEHDGVSFNSLI 411
           N  +W TMI+ Y   G    A + + ++ E    + N  +
Sbjct: 68  NVATWTTMISAYSSSGRPDTALKFYVQMLESKSETPNGFL 107


>emb|CAN65641.1| hypothetical protein VITISV_018600 [Vitis vinifera]
          Length = 869

 Score =  202 bits (514), Expect = 2e-50
 Identities = 104/175 (59%), Positives = 127/175 (72%)
 Frame = +1

Query: 1   TALISAHIYAGEPFEALRVFDQMLESGLEEPNGFTFSAALKACGLLRDIEYGRWIHELVS 180
           T +ISA+  +G P  AL+ + QMLES  E PNGF +SA LKACGL+ D+E G+ IH  V 
Sbjct: 73  TTMISAYSSSGRPDTALKFYVQMLESKSETPNGFLYSAVLKACGLVGDLESGKLIHGRVF 132

Query: 181 RAGLLFDTVLMNSVLDMYVKCGSVKEAARVFDEIFPGNFTSWNTMIAGYCKEGNMIEAEE 360
           RA L FDTVLMN++LDMYVKCGS+  A +VFD+I   + TSWNTMI+GY KEG M EA  
Sbjct: 133 RANLGFDTVLMNTLLDMYVKCGSLSSARKVFDDILCPSSTSWNTMISGYGKEGLMEEAVN 192

Query: 361 LFRRVPEHDGVSFNSLIAGFAQKESPKASEYVCLMHKLGFKLDHFTIPCALNTCG 525
           LF ++PE D VS+NS+IAGF  KES  A  +VC+MH+ G KLD FT  CAL TCG
Sbjct: 193 LFYQMPEPDTVSWNSIIAGFGCKESLGALRFVCMMHRKGLKLDGFTFSCALKTCG 247



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 29/100 (29%), Positives = 50/100 (50%)
 Frame = +1

Query: 112 AALKACGLLRDIEYGRWIHELVSRAGLLFDTVLMNSVLDMYVKCGSVKEAARVFDEIFPG 291
           + ++ CG  R   +GR +H  + + G+  D    N++L MYV    +K+A R+FDE    
Sbjct: 8   SVIRQCGRXRAFRHGRSLHAHIIKLGVFNDVFFANNLLAMYVDISLLKDARRLFDETLER 67

Query: 292 NFTSWNTMIAGYCKEGNMIEAEELFRRVPEHDGVSFNSLI 411
           N  +W TMI+ Y   G    A + + ++ E    + N  +
Sbjct: 68  NVATWTTMISAYSSSGRPDTALKFYVQMLESKSETPNGFL 107


>ref|XP_003527928.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g08210-like [Glycine max]
          Length = 686

 Score =  190 bits (483), Expect = 1e-46
 Identities = 96/177 (54%), Positives = 124/177 (70%)
 Frame = +1

Query: 1   TALISAHIYAGEPFEALRVFDQMLESGLEEPNGFTFSAALKACGLLRDIEYGRWIHELVS 180
           T ++SA   +G P EAL +++ MLES   +PN F +SA LKACGL+ D+E G  +H+ VS
Sbjct: 73  TTMVSAFTNSGRPHEALTLYNHMLESKTVQPNQFLYSAVLKACGLVGDVELGMLVHQHVS 132

Query: 181 RAGLLFDTVLMNSVLDMYVKCGSVKEAARVFDEIFPGNFTSWNTMIAGYCKEGNMIEAEE 360
            A L FDTVLMN++LDMYVKCGS+ +A RVF EI   N TSWNT+I G+ K+G M +A  
Sbjct: 133 EARLEFDTVLMNALLDMYVKCGSLMDAKRVFHEIPCKNSTSWNTLILGHAKQGLMRDAFN 192

Query: 361 LFRRVPEHDGVSFNSLIAGFAQKESPKASEYVCLMHKLGFKLDHFTIPCALNTCGSL 531
           LF ++PE D VS+NS+IAG A   SP A +++ +MH  G KLD FT PCAL  CG L
Sbjct: 193 LFDQMPEPDLVSWNSIIAGLADNASPHALQFLSMMHGKGLKLDAFTFPCALKACGLL 249



 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 8/157 (5%)
 Frame = +1

Query: 46  ALRVFDQMLESGLEEPNGFTFSAALKACGLLRDIEYGRWIHELVSRAGLLFDTVLMNSVL 225
           AL+    M   GL+  + FTF  ALKACGLL ++  GR IH  + ++GL      ++S++
Sbjct: 220 ALQFLSMMHGKGLKL-DAFTFPCALKACGLLGELTMGRQIHCCIIKSGLECSCYCISSLI 278

Query: 226 DMYVKCGSVKEAARVFDEIFP--GNFTSWNTMIAGYCKEGNMIEAEELFRRVPEHDGVSF 399
           DMY  C  + EA ++FD+  P   +   WN+M++GY   G+   A  +   +  H G  F
Sbjct: 279 DMYSNCKLLDEAMKIFDKNSPLAESLAVWNSMLSGYVANGDWWRALGMIACM-HHSGAQF 337

Query: 400 NSLIAGFAQK------ESPKASEYVCLMHKLGFKLDH 492
           +S     A K          AS+   L+   G++LDH
Sbjct: 338 DSYTFSIALKVCIYFDNLRLASQVHGLIITRGYELDH 374



 Score = 61.6 bits (148), Expect = 7e-08
 Identities = 30/99 (30%), Positives = 52/99 (52%)
 Frame = +1

Query: 115 ALKACGLLRDIEYGRWIHELVSRAGLLFDTVLMNSVLDMYVKCGSVKEAARVFDEIFPGN 294
           AL+ CG  + I++ + +H L+ + GL     L+NS++ +Y KC    +A  +FDE+   N
Sbjct: 9   ALRCCGRFQAIKHAKSLHSLIIKLGLSNHIFLLNSIISVYAKCSRFDDARTLFDEMPHRN 68

Query: 295 FTSWNTMIAGYCKEGNMIEAEELFRRVPEHDGVSFNSLI 411
             S+ TM++ +   G   EA  L+  + E   V  N  +
Sbjct: 69  IVSFTTMVSAFTNSGRPHEALTLYNHMLESKTVQPNQFL 107



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/112 (26%), Positives = 61/112 (54%)
 Frame = +1

Query: 4   ALISAHIYAGEPFEALRVFDQMLESGLEEPNGFTFSAALKACGLLRDIEYGRWIHELVSR 183
           +++S ++  G+ + AL +   M  SG +  + +TFS ALK C    ++     +H L+  
Sbjct: 309 SMLSGYVANGDWWRALGMIACMHHSGAQF-DSYTFSIALKVCIYFDNLRLASQVHGLIIT 367

Query: 184 AGLLFDTVLMNSVLDMYVKCGSVKEAARVFDEIFPGNFTSWNTMIAGYCKEG 339
            G   D V+ + ++D+Y K G++  A R+F+ +   +  +W+++I G  + G
Sbjct: 368 RGYELDHVVGSILIDLYAKQGNINSALRLFERLPNKDVVAWSSLIVGCARLG 419



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/98 (27%), Positives = 49/98 (50%)
 Frame = +1

Query: 88  EPNGFTFSAALKACGLLRDIEYGRWIHELVSRAGLLFDTVLMNSVLDMYVKCGSVKEAAR 267
           E + F  S  LK    L  ++ G+ IH    + G   + V+  ++ DMY KCG +++A  
Sbjct: 437 EIDHFVLSIVLKVSSSLASLQSGKQIHSFCLKKGYESERVITTALTDMYAKCGEIEDALA 496

Query: 268 VFDEIFPGNFTSWNTMIAGYCKEGNMIEAEELFRRVPE 381
           +FD ++  +  SW  +I G  + G   +A  +  ++ E
Sbjct: 497 LFDCLYEIDTMSWTGIIVGCAQNGRADKAISILHKMIE 534


>ref|XP_002301008.1| predicted protein [Populus trichocarpa] gi|222842734|gb|EEE80281.1|
           predicted protein [Populus trichocarpa]
          Length = 691

 Score =  189 bits (480), Expect = 2e-46
 Identities = 92/175 (52%), Positives = 127/175 (72%), Gaps = 1/175 (0%)
 Frame = +1

Query: 1   TALISAHIYAGEPFEALRVFDQMLESGLEEPNGFTFSAALKACGLLRDIEYGRWIHELVS 180
           T ++SA+   G+P EA++++ +ML+S  E PNGF +S  LKACGL+ +IE GR IH+  S
Sbjct: 73  TTMVSAYTSNGKPREAIKLYTRMLDSKSEVPNGFMYSVVLKACGLVGEIELGRLIHKRFS 132

Query: 181 RAGLLFDTVLMNSVLDMYVKCGSVKEAARVFDEIF-PGNFTSWNTMIAGYCKEGNMIEAE 357
           R  L +D VL+N++LDMYVKCG + +A +VFD IF   N TSWNTMI+GY KEG + EA 
Sbjct: 133 RENLDYDIVLLNALLDMYVKCGCLSDARKVFDRIFLRANSTSWNTMISGYFKEGLVEEAV 192

Query: 358 ELFRRVPEHDGVSFNSLIAGFAQKESPKASEYVCLMHKLGFKLDHFTIPCALNTC 522
            LF ++P+ + VS+N++IAG A+  S +A ++VC MH+ G KLD FT PCAL TC
Sbjct: 193 NLFNQMPDRNVVSWNTIIAGLAENGSSRALQFVCKMHREGIKLDKFTFPCALKTC 247



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/110 (30%), Positives = 55/110 (50%)
 Frame = +1

Query: 46  ALRVFDQMLESGLEEPNGFTFSAALKACGLLRDIEYGRWIHELVSRAGLLFDTVLMNSVL 225
           AL +F  M+  G+E    +  S  LK C  L  I  G+ +H    + G   + V + +++
Sbjct: 429 ALSLFRDMVTFGVEVDQ-YIVSNVLKVCSSLASIGTGKQVHAFCIKRGYETEQVTITALI 487

Query: 226 DMYVKCGSVKEAARVFDEIFPGNFTSWNTMIAGYCKEGNMIEAEELFRRV 375
           DMY KCG V++   +F  +   +   W  +I G  + G   EA E+FR++
Sbjct: 488 DMYSKCGEVEDGLVLFGCVADRDVVCWTGIIVGCAQNGRANEALEIFRQM 537



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 6/116 (5%)
 Frame = +1

Query: 100 FTFSAALKACGLLRDIEYGRWIHELVSRAGLLFDTVLMNSVLDMYVKCGSVKEAARVFDE 279
           FTF  ALK C     +  G+ IH  V ++GL      +++++DMY  C  + +A R+FD+
Sbjct: 238 FTFPCALKTCSYAGFLVAGKQIHCYVLKSGLESSCFAVSALVDMYSNCNGLDDAIRLFDQ 297

Query: 280 IFPG------NFTSWNTMIAGYCKEGNMIEAEELFRRVPEHDGVSFNSLIAGFAQK 429
              G      +   WN+M++GY        A  +  ++  H G S +S     A K
Sbjct: 298 YSGGTGSICDSLVLWNSMLSGYVVHEKNRAAVNMIAQI-HHSGASVDSYTLSSALK 352


>ref|XP_003601089.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355490137|gb|AES71340.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 745

 Score =  174 bits (442), Expect = 6e-42
 Identities = 85/175 (48%), Positives = 121/175 (69%)
 Frame = +1

Query: 1   TALISAHIYAGEPFEALRVFDQMLESGLEEPNGFTFSAALKACGLLRDIEYGRWIHELVS 180
           T ++S    +  P EAL ++++M+ES +E+PN F +SA LKACGL+R++E G+ +H  + 
Sbjct: 73  TTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVHYHIF 132

Query: 181 RAGLLFDTVLMNSVLDMYVKCGSVKEAARVFDEIFPGNFTSWNTMIAGYCKEGNMIEAEE 360
           +A L  D VLMN++LDMYVKCGS+++A RVF EI   N TSWNT+I GY K+G + +A +
Sbjct: 133 QAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDDAMK 192

Query: 361 LFRRVPEHDGVSFNSLIAGFAQKESPKASEYVCLMHKLGFKLDHFTIPCALNTCG 525
           LF ++PE D VS+NS+IAG     S +A  +V +MH  G K+D FT P  L  CG
Sbjct: 193 LFDKMPEPDIVSWNSIIAGLVDNASSRALRFVSMMHGKGLKMDEFTFPSVLKACG 247



 Score = 71.2 bits (173), Expect = 9e-11
 Identities = 52/178 (29%), Positives = 83/178 (46%), Gaps = 2/178 (1%)
 Frame = +1

Query: 4   ALISAHIYAGEPFEALRVFDQMLESGLEEPNGFTFSAALKACGLLRDIEYGRWIHELVSR 183
           +++S H+  G+  EAL +   M  SG+   + +TFS  LK C    ++     +H  V  
Sbjct: 312 SMLSGHVVNGDYVEALSMISHMHRSGVRF-DFYTFSIVLKICMNFDNLSLASQVHGFVIT 370

Query: 184 AGLLFDTVLMNSVLDMYVKCGSVKEAARVFDEIFPGNFTSWNTMIAGYCKEGNMIEAEEL 363
           +G   D V+ + ++D+Y K GS+  A R                               L
Sbjct: 371 SGYELDCVVGSILIDIYAKQGSINNALR-------------------------------L 399

Query: 364 FRRVPEHDGVSFNSLIAGFAQKESPKA--SEYVCLMHKLGFKLDHFTIPCALNTCGSL 531
           F R+P+ D V+++SLI G A+  S K   S ++ ++H LG ++DHF I   L  C SL
Sbjct: 400 FERLPDKDVVAWSSLITGCARFGSDKLAFSLFMDMIH-LGLQIDHFVISIVLKACSSL 456



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 39/124 (31%), Positives = 65/124 (52%), Gaps = 5/124 (4%)
 Frame = +1

Query: 46  ALRVFDQMLESGLEEPNGFTFSAALKACGLLRDIEYGRWIHELVSRAGLLFDTVLMNSVL 225
           ALR    M   GL+    FTF + LKACG   ++  GR IH  + ++G       +++++
Sbjct: 220 ALRFVSMMHGKGLKMDE-FTFPSVLKACGCSDELMLGREIHCYIIKSGFESSCYCISALI 278

Query: 226 DMYVKCGSVKEAARVFDEIFPGNFTS-----WNTMIAGYCKEGNMIEAEELFRRVPEHDG 390
           DMY  C  + EA ++FD+ F  +  S     WN+M++G+   G+ +EA  +   +    G
Sbjct: 279 DMYSSCKLLSEATKIFDQYFRNSSVSESLALWNSMLSGHVVNGDYVEALSMISHM-HRSG 337

Query: 391 VSFN 402
           V F+
Sbjct: 338 VRFD 341



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 37/127 (29%), Positives = 65/127 (51%)
 Frame = +1

Query: 1   TALISAHIYAGEPFEALRVFDQMLESGLEEPNGFTFSAALKACGLLRDIEYGRWIHELVS 180
           ++LI+     G    A  +F  M+  GL+  + F  S  LKAC  L   ++G+ +H L  
Sbjct: 412 SSLITGCARFGSDKLAFSLFMDMIHLGLQIDH-FVISIVLKACSSLASHQHGKQVHSLCL 470

Query: 181 RAGLLFDTVLMNSVLDMYVKCGSVKEAARVFDEIFPGNFTSWNTMIAGYCKEGNMIEAEE 360
           + G   + V+  +++DMY KCG +++A  +F  +   +  SW ++I G  + G   EA  
Sbjct: 471 KKGYESEGVVTTALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAIS 530

Query: 361 LFRRVPE 381
           L  ++ E
Sbjct: 531 LLHKMIE 537