BLASTX nr result
ID: Dioscorea21_contig00028889
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00028889 (300 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002325602.1| predicted protein [Populus trichocarpa] gi|2... 75 6e-12 ref|XP_002276507.1| PREDICTED: protein IQ-DOMAIN 14-like [Vitis ... 70 2e-10 ref|XP_002330701.1| predicted protein [Populus trichocarpa] gi|2... 68 9e-10 ref|XP_002531890.1| conserved hypothetical protein [Ricinus comm... 66 3e-09 gb|AFK42983.1| unknown [Lotus japonicus] 58 7e-07 >ref|XP_002325602.1| predicted protein [Populus trichocarpa] gi|222862477|gb|EEE99983.1| predicted protein [Populus trichocarpa] Length = 530 Score = 75.1 bits (183), Expect = 6e-12 Identities = 45/96 (46%), Positives = 52/96 (54%), Gaps = 6/96 (6%) Frame = -3 Query: 298 PMSAQAVLSDIKSGGFPWWWSWLERQVXXXXXXXXXXXXXQATTPKISTRSLAEAYPRPS 119 P SAQ+ L DI+S GFPWWW+WLERQ+ TP RS +A PRP Sbjct: 296 PKSAQSALMDIRSNGFPWWWNWLERQLPPTNPPESQALRNFQLTPP-RPRSDMKASPRPP 354 Query: 118 SRS-KQAVTGNANIDASTPRSSK-----PIKQKYTP 29 SRS KQ G N+D TPRSSK P +Q TP Sbjct: 355 SRSHKQQHFGFDNMDTPTPRSSKSTVFVPTRQARTP 390 >ref|XP_002276507.1| PREDICTED: protein IQ-DOMAIN 14-like [Vitis vinifera] Length = 535 Score = 70.1 bits (170), Expect = 2e-10 Identities = 40/95 (42%), Positives = 52/95 (54%), Gaps = 4/95 (4%) Frame = -3 Query: 298 PMSAQAVLSDIKSGGFPWWWSWLERQVXXXXXXXXXXXXXQATTPKISTRSLAEAYPRP- 122 P SAQA + DI+SGGFPWWW+WLERQ+ TP T L + PRP Sbjct: 300 PKSAQASIMDIRSGGFPWWWNWLERQLPPANPPESQATKSILLTPTRPTPDLRPS-PRPQ 358 Query: 121 SSRSKQAVTGNANIDASTPRSSK---PIKQKYTPN 26 +S +Q G N+++ TP+SSK P + K PN Sbjct: 359 ASNYRQQSFGFDNLESLTPKSSKSAVPARAKTPPN 393 >ref|XP_002330701.1| predicted protein [Populus trichocarpa] gi|222872305|gb|EEF09436.1| predicted protein [Populus trichocarpa] Length = 528 Score = 67.8 bits (164), Expect = 9e-10 Identities = 35/82 (42%), Positives = 42/82 (51%) Frame = -3 Query: 298 PMSAQAVLSDIKSGGFPWWWSWLERQVXXXXXXXXXXXXXQATTPKISTRSLAEAYPRPS 119 P SAQ+ L DI+S GFPWWW+WLERQ+ TP + + PS Sbjct: 291 PKSAQSSLMDIRSNGFPWWWNWLERQLPPTNPPESQALKNFQLTPPRPHSEIKPSPRPPS 350 Query: 118 SRSKQAVTGNANIDASTPRSSK 53 S KQ G N+D TPRSSK Sbjct: 351 SSHKQQHLGFDNMDTPTPRSSK 372 >ref|XP_002531890.1| conserved hypothetical protein [Ricinus communis] gi|223528457|gb|EEF30489.1| conserved hypothetical protein [Ricinus communis] Length = 433 Score = 66.2 bits (160), Expect = 3e-09 Identities = 41/103 (39%), Positives = 53/103 (51%), Gaps = 7/103 (6%) Frame = -3 Query: 298 PMSAQAVLSDIKSGGFPWWWSWLERQVXXXXXXXXXXXXXQATTPKISTRSLAEAYPRP- 122 P SAQ+ L+DI+S GFPWWW+WLERQ+ TP S + PRP Sbjct: 283 PKSAQSALADIRSNGFPWWWNWLERQLPPSSTPDNQAIKHFQLTPS-RLHSELKPSPRPS 341 Query: 121 SSRSKQAVTGNANIDASTPRSSKPI-----KQKYTPN-SSNRW 11 SS +KQ ++D TPRSSK + +Q TP S +W Sbjct: 342 SSNNKQHHFAFDSMDTPTPRSSKSVAFMSTRQARTPGIGSFKW 384 >gb|AFK42983.1| unknown [Lotus japonicus] Length = 370 Score = 58.2 bits (139), Expect = 7e-07 Identities = 32/83 (38%), Positives = 42/83 (50%), Gaps = 1/83 (1%) Frame = -3 Query: 298 PMSAQAVLSDIKSGGFPWWWSWLERQVXXXXXXXXXXXXXQATTPKISTRSLAEAYPRP- 122 P S Q ++D +SGGFPWWW+WLERQ+ TP S + PRP Sbjct: 131 PKSTQTPVTDTRSGGFPWWWNWLERQLPAANPQEKQILKNFQLTPS-RPYSEQKTSPRPG 189 Query: 121 SSRSKQAVTGNANIDASTPRSSK 53 SS +Q N+D TP+S+K Sbjct: 190 SSTPRQHNFAFDNMDTPTPKSTK 212