BLASTX nr result

ID: Dioscorea21_contig00028889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028889
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325602.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12
ref|XP_002276507.1| PREDICTED: protein IQ-DOMAIN 14-like [Vitis ...    70   2e-10
ref|XP_002330701.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
ref|XP_002531890.1| conserved hypothetical protein [Ricinus comm...    66   3e-09
gb|AFK42983.1| unknown [Lotus japonicus]                               58   7e-07

>ref|XP_002325602.1| predicted protein [Populus trichocarpa] gi|222862477|gb|EEE99983.1|
           predicted protein [Populus trichocarpa]
          Length = 530

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 45/96 (46%), Positives = 52/96 (54%), Gaps = 6/96 (6%)
 Frame = -3

Query: 298 PMSAQAVLSDIKSGGFPWWWSWLERQVXXXXXXXXXXXXXQATTPKISTRSLAEAYPRPS 119
           P SAQ+ L DI+S GFPWWW+WLERQ+                TP    RS  +A PRP 
Sbjct: 296 PKSAQSALMDIRSNGFPWWWNWLERQLPPTNPPESQALRNFQLTPP-RPRSDMKASPRPP 354

Query: 118 SRS-KQAVTGNANIDASTPRSSK-----PIKQKYTP 29
           SRS KQ   G  N+D  TPRSSK     P +Q  TP
Sbjct: 355 SRSHKQQHFGFDNMDTPTPRSSKSTVFVPTRQARTP 390


>ref|XP_002276507.1| PREDICTED: protein IQ-DOMAIN 14-like [Vitis vinifera]
          Length = 535

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 40/95 (42%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
 Frame = -3

Query: 298 PMSAQAVLSDIKSGGFPWWWSWLERQVXXXXXXXXXXXXXQATTPKISTRSLAEAYPRP- 122
           P SAQA + DI+SGGFPWWW+WLERQ+                TP   T  L  + PRP 
Sbjct: 300 PKSAQASIMDIRSGGFPWWWNWLERQLPPANPPESQATKSILLTPTRPTPDLRPS-PRPQ 358

Query: 121 SSRSKQAVTGNANIDASTPRSSK---PIKQKYTPN 26
           +S  +Q   G  N+++ TP+SSK   P + K  PN
Sbjct: 359 ASNYRQQSFGFDNLESLTPKSSKSAVPARAKTPPN 393


>ref|XP_002330701.1| predicted protein [Populus trichocarpa] gi|222872305|gb|EEF09436.1|
           predicted protein [Populus trichocarpa]
          Length = 528

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 35/82 (42%), Positives = 42/82 (51%)
 Frame = -3

Query: 298 PMSAQAVLSDIKSGGFPWWWSWLERQVXXXXXXXXXXXXXQATTPKISTRSLAEAYPRPS 119
           P SAQ+ L DI+S GFPWWW+WLERQ+                TP      +  +   PS
Sbjct: 291 PKSAQSSLMDIRSNGFPWWWNWLERQLPPTNPPESQALKNFQLTPPRPHSEIKPSPRPPS 350

Query: 118 SRSKQAVTGNANIDASTPRSSK 53
           S  KQ   G  N+D  TPRSSK
Sbjct: 351 SSHKQQHLGFDNMDTPTPRSSK 372


>ref|XP_002531890.1| conserved hypothetical protein [Ricinus communis]
           gi|223528457|gb|EEF30489.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 433

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 41/103 (39%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
 Frame = -3

Query: 298 PMSAQAVLSDIKSGGFPWWWSWLERQVXXXXXXXXXXXXXQATTPKISTRSLAEAYPRP- 122
           P SAQ+ L+DI+S GFPWWW+WLERQ+                TP     S  +  PRP 
Sbjct: 283 PKSAQSALADIRSNGFPWWWNWLERQLPPSSTPDNQAIKHFQLTPS-RLHSELKPSPRPS 341

Query: 121 SSRSKQAVTGNANIDASTPRSSKPI-----KQKYTPN-SSNRW 11
           SS +KQ      ++D  TPRSSK +     +Q  TP   S +W
Sbjct: 342 SSNNKQHHFAFDSMDTPTPRSSKSVAFMSTRQARTPGIGSFKW 384


>gb|AFK42983.1| unknown [Lotus japonicus]
          Length = 370

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/83 (38%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
 Frame = -3

Query: 298 PMSAQAVLSDIKSGGFPWWWSWLERQVXXXXXXXXXXXXXQATTPKISTRSLAEAYPRP- 122
           P S Q  ++D +SGGFPWWW+WLERQ+                TP     S  +  PRP 
Sbjct: 131 PKSTQTPVTDTRSGGFPWWWNWLERQLPAANPQEKQILKNFQLTPS-RPYSEQKTSPRPG 189

Query: 121 SSRSKQAVTGNANIDASTPRSSK 53
           SS  +Q      N+D  TP+S+K
Sbjct: 190 SSTPRQHNFAFDNMDTPTPKSTK 212


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