BLASTX nr result

ID: Dioscorea21_contig00028886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028886
         (751 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152476.1| PREDICTED: dof zinc finger protein DOF5.6-li...   142   1e-31
ref|XP_002318052.1| f-box family protein [Populus trichocarpa] g...   134   2e-29
emb|CBI15034.3| unnamed protein product [Vitis vinifera]              134   2e-29
ref|XP_002279622.1| PREDICTED: dof zinc finger protein DOF5.6 [V...   134   2e-29
ref|XP_002321600.1| f-box family protein [Populus trichocarpa] g...   132   8e-29

>ref|XP_004152476.1| PREDICTED: dof zinc finger protein DOF5.6-like [Cucumis sativus]
           gi|449487762|ref|XP_004157788.1| PREDICTED: dof zinc
           finger protein DOF5.6-like [Cucumis sativus]
          Length = 333

 Score =  142 bits (357), Expect = 1e-31
 Identities = 66/133 (49%), Positives = 90/133 (67%), Gaps = 7/133 (5%)
 Frame = +2

Query: 131 IQACMDSFNWFKGIEEKEGGDNGLTVXXXXXXXKTEDRSLRHRLENNQAVNCPRCNSNYT 310
           +Q CMDS +W +G   +E G +  ++              R R +++QA+ CPRC+S +T
Sbjct: 6   LQVCMDSSDWLQGTMNEESGMDSSSLSGDMLSCSRPLTERRLRPQHDQALKCPRCDSTHT 65

Query: 311 KFCYYNNYSLSQPRYYCKTCRRYWTKGGSLRNIPIGGGCRK-------KKSSLNKNQPVE 469
           KFCYYNNYSLSQPRY+CKTCRRYWTKGG+LRNIP+GGGCRK       KKS+ ++ Q  +
Sbjct: 66  KFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSTTKKSNDSQQQQQQ 125

Query: 470 PLLQSQPVMEFNH 508
           P +Q QP+ + +H
Sbjct: 126 PQIQ-QPISQNHH 137


>ref|XP_002318052.1| f-box family protein [Populus trichocarpa]
           gi|222858725|gb|EEE96272.1| f-box family protein
           [Populus trichocarpa]
          Length = 312

 Score =  134 bits (338), Expect = 2e-29
 Identities = 64/133 (48%), Positives = 83/133 (62%)
 Frame = +2

Query: 131 IQACMDSFNWFKGIEEKEGGDNGLTVXXXXXXXKTEDRSLRHRLENNQAVNCPRCNSNYT 310
           +Q CMDS +W +G    E G +  +               R R  ++QA+ CPRC+S +T
Sbjct: 6   LQVCMDSSDWLQGTINDESGMDSSSPSGDMLTCSRPLIERRLRPPHDQALKCPRCDSTHT 65

Query: 311 KFCYYNNYSLSQPRYYCKTCRRYWTKGGSLRNIPIGGGCRKKKSSLNKNQPVEPLLQSQP 490
           KFCYYNNYSLSQPRY+CKTCRRYWTKGG+LRNIP+GGGCRK K  ++K    + + Q  P
Sbjct: 66  KFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNK-KVSKKSNDQSVNQINP 124

Query: 491 VMEFNHYVSDFDL 529
               +H  +D  L
Sbjct: 125 GSSSSHNPTDLHL 137


>emb|CBI15034.3| unnamed protein product [Vitis vinifera]
          Length = 318

 Score =  134 bits (337), Expect = 2e-29
 Identities = 71/165 (43%), Positives = 94/165 (56%), Gaps = 24/165 (14%)
 Frame = +2

Query: 131 IQACMDSFNWFKGIEEKEGGDNGLTVXXXXXXXKTEDRSLRHRLENNQAVNCPRCNSNYT 310
           +  CMDS  W +G   +E G +  +               R R +++QA+ CPRC+S +T
Sbjct: 6   LPVCMDSSEWLQGTAHEENGMDSSSPSGDMLTCSRPLIERRLRPQHDQALKCPRCDSTHT 65

Query: 311 KFCYYNNYSLSQPRYYCKTCRRYWTKGGSLRNIPIGGGCRKKKS---------SLNKN-- 457
           KFCYYNNYSLSQPRY+CKTCRRYWTKGG+LRNIP+GGGCRK K          S+N+N  
Sbjct: 66  KFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVASKKSNDHSINQNPG 125

Query: 458 ----QPVEPLLQSQPVMEFNHY---------VSDFDLMENKYVSM 553
                P + L  S P ++F+H          + +   ME+KY  M
Sbjct: 126 PSSHNPTD-LHLSFPEVQFSHLSNLLGSHGGLGNHSFMESKYNGM 169


>ref|XP_002279622.1| PREDICTED: dof zinc finger protein DOF5.6 [Vitis vinifera]
          Length = 308

 Score =  134 bits (337), Expect = 2e-29
 Identities = 71/165 (43%), Positives = 94/165 (56%), Gaps = 24/165 (14%)
 Frame = +2

Query: 131 IQACMDSFNWFKGIEEKEGGDNGLTVXXXXXXXKTEDRSLRHRLENNQAVNCPRCNSNYT 310
           +  CMDS  W +G   +E G +  +               R R +++QA+ CPRC+S +T
Sbjct: 6   LPVCMDSSEWLQGTAHEENGMDSSSPSGDMLTCSRPLIERRLRPQHDQALKCPRCDSTHT 65

Query: 311 KFCYYNNYSLSQPRYYCKTCRRYWTKGGSLRNIPIGGGCRKKKS---------SLNKN-- 457
           KFCYYNNYSLSQPRY+CKTCRRYWTKGG+LRNIP+GGGCRK K          S+N+N  
Sbjct: 66  KFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVASKKSNDHSINQNPG 125

Query: 458 ----QPVEPLLQSQPVMEFNHY---------VSDFDLMENKYVSM 553
                P + L  S P ++F+H          + +   ME+KY  M
Sbjct: 126 PSSHNPTD-LHLSFPEVQFSHLSNLLGSHGGLGNHSFMESKYNGM 169


>ref|XP_002321600.1| f-box family protein [Populus trichocarpa]
           gi|222868596|gb|EEF05727.1| f-box family protein
           [Populus trichocarpa]
          Length = 314

 Score =  132 bits (332), Expect = 8e-29
 Identities = 59/109 (54%), Positives = 74/109 (67%)
 Frame = +2

Query: 131 IQACMDSFNWFKGIEEKEGGDNGLTVXXXXXXXKTEDRSLRHRLENNQAVNCPRCNSNYT 310
           +Q CMDS +W +G   +E G +  +               R R  ++QA+ CPRC+S +T
Sbjct: 6   LQVCMDSSDWLQGTINEESGMDSSSPSGDMLTCSRPLIERRLRPPHDQALKCPRCDSAHT 65

Query: 311 KFCYYNNYSLSQPRYYCKTCRRYWTKGGSLRNIPIGGGCRKKKSSLNKN 457
           KFCYYNNYSLSQPRY+CKTCRRYWTKGG+LRNIP+GGGCRK K    K+
Sbjct: 66  KFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSKKS 114


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