BLASTX nr result

ID: Dioscorea21_contig00028870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028870
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q657B3.1|C3H7_ORYSJ RecName: Full=Zinc finger CCCH domain-con...   123   1e-26
gb|EEE54840.1| hypothetical protein OsJ_02295 [Oryza sativa Japo...   123   1e-26
gb|EEC70929.1| hypothetical protein OsI_02512 [Oryza sativa Indi...   123   1e-26
ref|XP_003569232.1| PREDICTED: zinc finger CCCH domain-containin...   120   1e-25
dbj|BAJ97054.1| predicted protein [Hordeum vulgare subsp. vulgare]    118   6e-25

>sp|Q657B3.1|C3H7_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 7;
           Short=OsC3H7 gi|52076312|dbj|BAD45097.1| zinc finger
           (CCCH-type) protein-like [Oryza sativa Japonica Group]
          Length = 698

 Score =  123 bits (309), Expect = 1e-26
 Identities = 52/68 (76%), Positives = 59/68 (86%)
 Frame = -1

Query: 231 KGNLCKFSHDTTPLTKSQPCRYFACDICLKGDDYPFDHQLSKYPCQNFMS*GMCIRGDKC 52
           +GNLCKFSHDTTPLTKS+PC ++A   CLKGDD P+DH+LSKYPC NFM  GMCIRGDKC
Sbjct: 445 QGNLCKFSHDTTPLTKSKPCTHYARGSCLKGDDCPYDHELSKYPCHNFMENGMCIRGDKC 504

Query: 51  KFSHKVPT 28
           KFSH +PT
Sbjct: 505 KFSHVIPT 512


>gb|EEE54840.1| hypothetical protein OsJ_02295 [Oryza sativa Japonica Group]
          Length = 698

 Score =  123 bits (309), Expect = 1e-26
 Identities = 52/68 (76%), Positives = 59/68 (86%)
 Frame = -1

Query: 231 KGNLCKFSHDTTPLTKSQPCRYFACDICLKGDDYPFDHQLSKYPCQNFMS*GMCIRGDKC 52
           +GNLCKFSHDTTPLTKS+PC ++A   CLKGDD P+DH+LSKYPC NFM  GMCIRGDKC
Sbjct: 445 QGNLCKFSHDTTPLTKSKPCTHYARGSCLKGDDCPYDHELSKYPCHNFMENGMCIRGDKC 504

Query: 51  KFSHKVPT 28
           KFSH +PT
Sbjct: 505 KFSHVIPT 512


>gb|EEC70929.1| hypothetical protein OsI_02512 [Oryza sativa Indica Group]
          Length = 698

 Score =  123 bits (309), Expect = 1e-26
 Identities = 52/68 (76%), Positives = 59/68 (86%)
 Frame = -1

Query: 231 KGNLCKFSHDTTPLTKSQPCRYFACDICLKGDDYPFDHQLSKYPCQNFMS*GMCIRGDKC 52
           +GNLCKFSHDTTPLTKS+PC ++A   CLKGDD P+DH+LSKYPC NFM  GMCIRGDKC
Sbjct: 445 QGNLCKFSHDTTPLTKSKPCTHYARGSCLKGDDCPYDHELSKYPCHNFMENGMCIRGDKC 504

Query: 51  KFSHKVPT 28
           KFSH +PT
Sbjct: 505 KFSHVIPT 512


>ref|XP_003569232.1| PREDICTED: zinc finger CCCH domain-containing protein 7-like
           [Brachypodium distachyon]
          Length = 685

 Score =  120 bits (301), Expect = 1e-25
 Identities = 50/68 (73%), Positives = 58/68 (85%)
 Frame = -1

Query: 231 KGNLCKFSHDTTPLTKSQPCRYFACDICLKGDDYPFDHQLSKYPCQNFMS*GMCIRGDKC 52
           +GN+CKFSHDTTPLTKS+PC +FA   CLKGDD P+DH+LSKYPC NF+  GMC+RGDKC
Sbjct: 443 QGNVCKFSHDTTPLTKSKPCTHFARGSCLKGDDCPYDHELSKYPCHNFLGNGMCLRGDKC 502

Query: 51  KFSHKVPT 28
           KFSH  PT
Sbjct: 503 KFSHVAPT 510


>dbj|BAJ97054.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 676

 Score =  118 bits (295), Expect = 6e-25
 Identities = 50/67 (74%), Positives = 56/67 (83%)
 Frame = -1

Query: 228 GNLCKFSHDTTPLTKSQPCRYFACDICLKGDDYPFDHQLSKYPCQNFMS*GMCIRGDKCK 49
           GN CKFSHDTTPLTKS+PC +FA   CLKGD+ P+DH+LSKYPC NF+  GMC RGDKCK
Sbjct: 426 GNACKFSHDTTPLTKSKPCTHFARGSCLKGDECPYDHELSKYPCHNFVENGMCFRGDKCK 485

Query: 48  FSHKVPT 28
           FSH VPT
Sbjct: 486 FSHVVPT 492


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