BLASTX nr result

ID: Dioscorea21_contig00028803 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028803
         (735 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270427.2| PREDICTED: uncharacterized protein LOC100259...    79   1e-12
emb|CBI26466.3| unnamed protein product [Vitis vinifera]               79   1e-12
ref|XP_002452692.1| hypothetical protein SORBIDRAFT_04g030770 [S...    75   2e-11
ref|XP_004151910.1| PREDICTED: growth-regulating factor 3-like [...    68   2e-09
emb|CAD97478.1| transcription activator GRF2 [Oryza sativa Japon...    64   3e-08

>ref|XP_002270427.2| PREDICTED: uncharacterized protein LOC100259737 [Vitis vinifera]
          Length = 330

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 61/153 (39%), Positives = 82/153 (53%), Gaps = 1/153 (0%)
 Frame = +1

Query: 1   DKEFRYVHGGKSDANVDGHNVLTGESASDKGL-LGGELDRWWXXXXXXXXXYHPELHLPA 177
           +K++RY+HG K +  V  H+  +  S S++GL +   LD  W         + P     +
Sbjct: 189 NKDYRYLHGLKPE--VGEHSFFSEASGSNRGLQMDSPLDSTWPLMPSRVSSFPPSKS--S 244

Query: 178 ANNLGQTDIMSSLTMQQHSLLGSEYTGYGSISSEQEKHESGQQVLRPLFDEWPKTRDHHP 357
            N++ Q+D        QHS   SE+      S E  K E   Q LRP FDEWPKTRD   
Sbjct: 245 ENSILQSDY------PQHSFFSSEFA-----SGEVVKQEG--QSLRPFFDEWPKTRD--S 289

Query: 358 WSLGFSGDDHSNRTSSFSATQLSMSIPMPSADF 456
           WS G   ++ SN+T SFS TQLS+SIPM S+DF
Sbjct: 290 WS-GLE-EERSNQT-SFSTTQLSISIPMASSDF 319


>emb|CBI26466.3| unnamed protein product [Vitis vinifera]
          Length = 373

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 61/153 (39%), Positives = 82/153 (53%), Gaps = 1/153 (0%)
 Frame = +1

Query: 1   DKEFRYVHGGKSDANVDGHNVLTGESASDKGL-LGGELDRWWXXXXXXXXXYHPELHLPA 177
           +K++RY+HG K +  V  H+  +  S S++GL +   LD  W         + P     +
Sbjct: 232 NKDYRYLHGLKPE--VGEHSFFSEASGSNRGLQMDSPLDSTWPLMPSRVSSFPPSKS--S 287

Query: 178 ANNLGQTDIMSSLTMQQHSLLGSEYTGYGSISSEQEKHESGQQVLRPLFDEWPKTRDHHP 357
            N++ Q+D        QHS   SE+      S E  K E   Q LRP FDEWPKTRD   
Sbjct: 288 ENSILQSDY------PQHSFFSSEFA-----SGEVVKQEG--QSLRPFFDEWPKTRD--S 332

Query: 358 WSLGFSGDDHSNRTSSFSATQLSMSIPMPSADF 456
           WS G   ++ SN+T SFS TQLS+SIPM S+DF
Sbjct: 333 WS-GLE-EERSNQT-SFSTTQLSISIPMASSDF 362


>ref|XP_002452692.1| hypothetical protein SORBIDRAFT_04g030770 [Sorghum bicolor]
           gi|241932523|gb|EES05668.1| hypothetical protein
           SORBIDRAFT_04g030770 [Sorghum bicolor]
          Length = 470

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 49/115 (42%), Positives = 67/115 (58%), Gaps = 3/115 (2%)
 Frame = +1

Query: 169 LPAANNLGQTDIMSSLTMQQH---SLLGSEYTGYGSISSEQEKHESGQQVLRPLFDEWPK 339
           L A +NLGQ+ + S   M++    S LG+  + +G++ S  ++ E+  Q LRP FDEWPK
Sbjct: 310 LGALSNLGQSTVTSLSKMERQQPLSFLGN--SEFGAMESAAKQQEN--QTLRPFFDEWPK 365

Query: 340 TRDHHPWSLGFSGDDHSNRTSSFSATQLSMSIPMPSADFXXXXXXXXPNA*GRIG 504
            RD  P   G S D+ ++   SF ATQLSMSIPM S+DF        PN   R+G
Sbjct: 366 ARDSWP---GLSDDNAASLAPSFPATQLSMSIPMASSDF-SVASSQSPNVYNRVG 416


>ref|XP_004151910.1| PREDICTED: growth-regulating factor 3-like [Cucumis sativus]
           gi|449484096|ref|XP_004156783.1| PREDICTED:
           growth-regulating factor 3-like [Cucumis sativus]
          Length = 336

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 51/151 (33%), Positives = 74/151 (49%), Gaps = 1/151 (0%)
 Frame = +1

Query: 4   KEFRYVHGGKSDANVDGHNVLTGESASDKGL-LGGELDRWWXXXXXXXXXYHPELHLPAA 180
           K++RY+ G + +A V  H+  +  S S + + +   +D  W         +      PA+
Sbjct: 197 KDYRYLQGLRPEAGV--HSFFSEASGSSRAVQMDAPIDNTWPMMSSRSPSF------PAS 248

Query: 181 NNLGQTDIMSSLTMQQHSLLGSEYTGYGSISSEQEKHESGQQVLRPLFDEWPKTRDHHPW 360
            +   +   S     QHS  G EY      S E  K E   Q L+PLFDEWP+TR+   W
Sbjct: 249 KSTENSIFQSGYA--QHSFFGGEYA-----SGETLKQEG--QSLQPLFDEWPRTRES--W 297

Query: 361 SLGFSGDDHSNRTSSFSATQLSMSIPMPSAD 453
           +     DD  +  +SFS TQLS+SIPM S+D
Sbjct: 298 T---GLDDERSNQTSFSTTQLSISIPMASSD 325


>emb|CAD97478.1| transcription activator GRF2 [Oryza sativa Japonica Group]
          Length = 225

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 43/98 (43%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
 Frame = +1

Query: 169 LPAANNLGQT--DIMSSLTMQQHSLLGSEYTGYGSISSEQEKHESGQQVLRPLFDEWPKT 342
           L A ++LGQ     +S +  Q  S  G++Y    S+  E        Q LRP FDEWPK 
Sbjct: 131 LGALSDLGQNTPSSLSKVQRQPLSFFGNDYAAVDSVKQEN-------QTLRPFFDEWPKG 183

Query: 343 RDHHPWSLGFSGDDHSNRTSSFSATQLSMSIPMPSADF 456
           RD   WS     D+++N  SSFS TQLS+SIPM S+DF
Sbjct: 184 RDS--WS--DLADENAN-LSSFSGTQLSISIPMASSDF 216


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