BLASTX nr result

ID: Dioscorea21_contig00028777 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028777
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545893.1| PREDICTED: RNA polymerase II C-terminal doma...   140   8e-32
ref|XP_003543063.1| PREDICTED: RNA polymerase II C-terminal doma...   139   2e-31
gb|AFW63149.1| hypothetical protein ZEAMMB73_795279 [Zea mays]        138   4e-31
ref|XP_002305017.1| predicted protein [Populus trichocarpa] gi|2...   138   4e-31
dbj|BAJ93585.1| predicted protein [Hordeum vulgare subsp. vulgare]    133   1e-29

>ref|XP_003545893.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like [Glycine max]
          Length = 958

 Score =  140 bits (354), Expect = 8e-32
 Identities = 74/123 (60%), Positives = 85/123 (69%)
 Frame = -3

Query: 371 ELREIRIAGFSPASGRCPPLAVLLCIASGEVIFKMEXXXXXXXXXXXXXXSMHAACLREN 192
           +L+EIRI+ FS  S RCPPLAVL  I S  + FKME               +H++C+REN
Sbjct: 27  DLKEIRISHFSQPSERCPPLAVLHTITSFGICFKMESSTSQTRQQQDVLFHLHSSCIREN 86

Query: 191 KTAVVQLEGEEIHLVAMPTRKNLTDCSYFWGFSVMPGLYNSCLAMLNLRCLGIVFDLDET 12
           KTAV+ L GEEIHLVAM +R N   C  FWGF V  GLYNSCL MLNLRCLGIVFDLDET
Sbjct: 87  KTAVMPLRGEEIHLVAMYSRNNDRPC--FWGFIVASGLYNSCLTMLNLRCLGIVFDLDET 144

Query: 11  LIV 3
           L+V
Sbjct: 145 LVV 147


>ref|XP_003543063.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like [Glycine max]
          Length = 960

 Score =  139 bits (351), Expect = 2e-31
 Identities = 73/123 (59%), Positives = 85/123 (69%)
 Frame = -3

Query: 371 ELREIRIAGFSPASGRCPPLAVLLCIASGEVIFKMEXXXXXXXXXXXXXXSMHAACLREN 192
           +L+EIRI+ FS  S RCPPLAVL  I S  + FKME               +H++C+REN
Sbjct: 27  DLKEIRISHFSQPSERCPPLAVLHTITSFGICFKMESSTSQKRQQQDALFHLHSSCIREN 86

Query: 191 KTAVVQLEGEEIHLVAMPTRKNLTDCSYFWGFSVMPGLYNSCLAMLNLRCLGIVFDLDET 12
           KTAV+ + GEEIHLVAM +R N   C  FWGF V  GLYNSCL MLNLRCLGIVFDLDET
Sbjct: 87  KTAVMPVRGEEIHLVAMYSRNNDRPC--FWGFIVASGLYNSCLTMLNLRCLGIVFDLDET 144

Query: 11  LIV 3
           L+V
Sbjct: 145 LVV 147


>gb|AFW63149.1| hypothetical protein ZEAMMB73_795279 [Zea mays]
          Length = 932

 Score =  138 bits (348), Expect = 4e-31
 Identities = 72/121 (59%), Positives = 82/121 (67%)
 Frame = -3

Query: 365 REIRIAGFSPASGRCPPLAVLLCIASGEVIFKMEXXXXXXXXXXXXXXSMHAACLRENKT 186
           REIR+   SP S RCPPLAV+  +A G     ME               MH ACLRENKT
Sbjct: 35  REIRVERISPPSERCPPLAVMHTVAVGARCLVMESRPPVVADVVPPLVVMHTACLRENKT 94

Query: 185 AVVQLEGEEIHLVAMPTRKNLTDCSYFWGFSVMPGLYNSCLAMLNLRCLGIVFDLDETLI 6
           AVV L  EE+HLVAM +R+NLT+ + FWG+ +  GLYNSCL MLNLRCLGIVFDLDETLI
Sbjct: 95  AVVPLGDEELHLVAMTSRRNLTNHACFWGYKLPFGLYNSCLTMLNLRCLGIVFDLDETLI 154

Query: 5   V 3
           V
Sbjct: 155 V 155


>ref|XP_002305017.1| predicted protein [Populus trichocarpa] gi|222847981|gb|EEE85528.1|
           predicted protein [Populus trichocarpa]
          Length = 967

 Score =  138 bits (348), Expect = 4e-31
 Identities = 75/126 (59%), Positives = 87/126 (69%), Gaps = 4/126 (3%)
 Frame = -3

Query: 368 LREIRIAGFSPASGRCPPLAVLLCIASGEVIFKMEXXXXXXXXXXXXXXS----MHAACL 201
           ++EIRI+ FS  S RCPPLAVL  I S  V FKME              S    +H++C+
Sbjct: 42  VKEIRISHFSQTSERCPPLAVLHTITSIGVCFKMEESTSSSTTKISQQESPLHLLHSSCI 101

Query: 200 RENKTAVVQLEGEEIHLVAMPTRKNLTDCSYFWGFSVMPGLYNSCLAMLNLRCLGIVFDL 21
           +ENKTAV+ L GEE+HLVAMP+R N      FWGFSV PGLY+SCL MLNLRCLGIVFDL
Sbjct: 102 QENKTAVMHLGGEELHLVAMPSRSNERQHPCFWGFSVAPGLYDSCLVMLNLRCLGIVFDL 161

Query: 20  DETLIV 3
           DETLIV
Sbjct: 162 DETLIV 167


>dbj|BAJ93585.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 932

 Score =  133 bits (335), Expect = 1e-29
 Identities = 71/121 (58%), Positives = 83/121 (68%)
 Frame = -3

Query: 365 REIRIAGFSPASGRCPPLAVLLCIASGEVIFKMEXXXXXXXXXXXXXXSMHAACLRENKT 186
           REIR+   SP S RC PLAV+  +A G     ME              +MHAACLR+NKT
Sbjct: 33  REIRVDRLSPPSERCLPLAVMHTVAVGARCLVMESRPPTADEPPPPLVAMHAACLRDNKT 92

Query: 185 AVVQLEGEEIHLVAMPTRKNLTDCSYFWGFSVMPGLYNSCLAMLNLRCLGIVFDLDETLI 6
           AVV L  EE+HLVAM +R++LT+ + FWG+ V  GLYNSCL MLNLRCLGIVFDLDETLI
Sbjct: 93  AVVPLGEEELHLVAMTSRRHLTNHACFWGYKVPFGLYNSCLTMLNLRCLGIVFDLDETLI 152

Query: 5   V 3
           V
Sbjct: 153 V 153


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