BLASTX nr result
ID: Dioscorea21_contig00028777
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00028777 (385 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003545893.1| PREDICTED: RNA polymerase II C-terminal doma... 140 8e-32 ref|XP_003543063.1| PREDICTED: RNA polymerase II C-terminal doma... 139 2e-31 gb|AFW63149.1| hypothetical protein ZEAMMB73_795279 [Zea mays] 138 4e-31 ref|XP_002305017.1| predicted protein [Populus trichocarpa] gi|2... 138 4e-31 dbj|BAJ93585.1| predicted protein [Hordeum vulgare subsp. vulgare] 133 1e-29 >ref|XP_003545893.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1-like [Glycine max] Length = 958 Score = 140 bits (354), Expect = 8e-32 Identities = 74/123 (60%), Positives = 85/123 (69%) Frame = -3 Query: 371 ELREIRIAGFSPASGRCPPLAVLLCIASGEVIFKMEXXXXXXXXXXXXXXSMHAACLREN 192 +L+EIRI+ FS S RCPPLAVL I S + FKME +H++C+REN Sbjct: 27 DLKEIRISHFSQPSERCPPLAVLHTITSFGICFKMESSTSQTRQQQDVLFHLHSSCIREN 86 Query: 191 KTAVVQLEGEEIHLVAMPTRKNLTDCSYFWGFSVMPGLYNSCLAMLNLRCLGIVFDLDET 12 KTAV+ L GEEIHLVAM +R N C FWGF V GLYNSCL MLNLRCLGIVFDLDET Sbjct: 87 KTAVMPLRGEEIHLVAMYSRNNDRPC--FWGFIVASGLYNSCLTMLNLRCLGIVFDLDET 144 Query: 11 LIV 3 L+V Sbjct: 145 LVV 147 >ref|XP_003543063.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1-like [Glycine max] Length = 960 Score = 139 bits (351), Expect = 2e-31 Identities = 73/123 (59%), Positives = 85/123 (69%) Frame = -3 Query: 371 ELREIRIAGFSPASGRCPPLAVLLCIASGEVIFKMEXXXXXXXXXXXXXXSMHAACLREN 192 +L+EIRI+ FS S RCPPLAVL I S + FKME +H++C+REN Sbjct: 27 DLKEIRISHFSQPSERCPPLAVLHTITSFGICFKMESSTSQKRQQQDALFHLHSSCIREN 86 Query: 191 KTAVVQLEGEEIHLVAMPTRKNLTDCSYFWGFSVMPGLYNSCLAMLNLRCLGIVFDLDET 12 KTAV+ + GEEIHLVAM +R N C FWGF V GLYNSCL MLNLRCLGIVFDLDET Sbjct: 87 KTAVMPVRGEEIHLVAMYSRNNDRPC--FWGFIVASGLYNSCLTMLNLRCLGIVFDLDET 144 Query: 11 LIV 3 L+V Sbjct: 145 LVV 147 >gb|AFW63149.1| hypothetical protein ZEAMMB73_795279 [Zea mays] Length = 932 Score = 138 bits (348), Expect = 4e-31 Identities = 72/121 (59%), Positives = 82/121 (67%) Frame = -3 Query: 365 REIRIAGFSPASGRCPPLAVLLCIASGEVIFKMEXXXXXXXXXXXXXXSMHAACLRENKT 186 REIR+ SP S RCPPLAV+ +A G ME MH ACLRENKT Sbjct: 35 REIRVERISPPSERCPPLAVMHTVAVGARCLVMESRPPVVADVVPPLVVMHTACLRENKT 94 Query: 185 AVVQLEGEEIHLVAMPTRKNLTDCSYFWGFSVMPGLYNSCLAMLNLRCLGIVFDLDETLI 6 AVV L EE+HLVAM +R+NLT+ + FWG+ + GLYNSCL MLNLRCLGIVFDLDETLI Sbjct: 95 AVVPLGDEELHLVAMTSRRNLTNHACFWGYKLPFGLYNSCLTMLNLRCLGIVFDLDETLI 154 Query: 5 V 3 V Sbjct: 155 V 155 >ref|XP_002305017.1| predicted protein [Populus trichocarpa] gi|222847981|gb|EEE85528.1| predicted protein [Populus trichocarpa] Length = 967 Score = 138 bits (348), Expect = 4e-31 Identities = 75/126 (59%), Positives = 87/126 (69%), Gaps = 4/126 (3%) Frame = -3 Query: 368 LREIRIAGFSPASGRCPPLAVLLCIASGEVIFKMEXXXXXXXXXXXXXXS----MHAACL 201 ++EIRI+ FS S RCPPLAVL I S V FKME S +H++C+ Sbjct: 42 VKEIRISHFSQTSERCPPLAVLHTITSIGVCFKMEESTSSSTTKISQQESPLHLLHSSCI 101 Query: 200 RENKTAVVQLEGEEIHLVAMPTRKNLTDCSYFWGFSVMPGLYNSCLAMLNLRCLGIVFDL 21 +ENKTAV+ L GEE+HLVAMP+R N FWGFSV PGLY+SCL MLNLRCLGIVFDL Sbjct: 102 QENKTAVMHLGGEELHLVAMPSRSNERQHPCFWGFSVAPGLYDSCLVMLNLRCLGIVFDL 161 Query: 20 DETLIV 3 DETLIV Sbjct: 162 DETLIV 167 >dbj|BAJ93585.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 932 Score = 133 bits (335), Expect = 1e-29 Identities = 71/121 (58%), Positives = 83/121 (68%) Frame = -3 Query: 365 REIRIAGFSPASGRCPPLAVLLCIASGEVIFKMEXXXXXXXXXXXXXXSMHAACLRENKT 186 REIR+ SP S RC PLAV+ +A G ME +MHAACLR+NKT Sbjct: 33 REIRVDRLSPPSERCLPLAVMHTVAVGARCLVMESRPPTADEPPPPLVAMHAACLRDNKT 92 Query: 185 AVVQLEGEEIHLVAMPTRKNLTDCSYFWGFSVMPGLYNSCLAMLNLRCLGIVFDLDETLI 6 AVV L EE+HLVAM +R++LT+ + FWG+ V GLYNSCL MLNLRCLGIVFDLDETLI Sbjct: 93 AVVPLGEEELHLVAMTSRRHLTNHACFWGYKVPFGLYNSCLTMLNLRCLGIVFDLDETLI 152 Query: 5 V 3 V Sbjct: 153 V 153