BLASTX nr result

ID: Dioscorea21_contig00028773 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028773
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS98504.1| hypothetical protein [Oryza sativa Japonica Group...   102   4e-20
gb|AFW69346.1| hypothetical protein ZEAMMB73_957077 [Zea mays]        100   1e-19
gb|AAT68730.1| hypothetical protein At1g76610 [Arabidopsis thali...   100   2e-19
ref|NP_177787.1| uncharacterized protein [Arabidopsis thaliana] ...   100   2e-19
ref|XP_002437538.1| hypothetical protein SORBIDRAFT_10g029010 [S...   100   2e-19

>gb|AAS98504.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|125551653|gb|EAY97362.1| hypothetical protein
           OsI_19284 [Oryza sativa Indica Group]
           gi|222630957|gb|EEE63089.1| hypothetical protein
           OsJ_17897 [Oryza sativa Japonica Group]
          Length = 263

 Score =  102 bits (253), Expect = 4e-20
 Identities = 51/106 (48%), Positives = 69/106 (65%), Gaps = 15/106 (14%)
 Frame = -2

Query: 274 YGHRRGHVSFCVQSDPAVPPPFLYEISVPTALLAREMSSGFVRMSLECSFASRR------ 113
           +G R GHV+FCVQ D A+PPPFL+E+SVP   LA EM SG +R++LEC  +S +      
Sbjct: 88  FGRRSGHVTFCVQRDAAMPPPFLFELSVPMLSLAAEMGSGLLRIALECHHSSGKVVVGAA 147

Query: 112 ---------STRCGAGPVWKAYCNGRKVGYAVRRKPSEKDLVVVQS 2
                    +   G+  VWKA CNGR VGYAVRR+P+++D  V++S
Sbjct: 148 DGDTINNAGTGGGGSRSVWKASCNGRDVGYAVRRRPTDQDCRVLES 193


>gb|AFW69346.1| hypothetical protein ZEAMMB73_957077 [Zea mays]
          Length = 264

 Score =  100 bits (249), Expect = 1e-19
 Identities = 50/91 (54%), Positives = 63/91 (69%)
 Frame = -2

Query: 274 YGHRRGHVSFCVQSDPAVPPPFLYEISVPTALLAREMSSGFVRMSLECSFASRRSTRCGA 95
           +G R G V+FCVQ D AVPPPFL+E+SVPT  LA EM SG +R++LEC   +    R   
Sbjct: 92  FGRRAGRVTFCVQRDAAVPPPFLFELSVPTQSLATEMGSGLLRIALECHRGAGDDHR--- 148

Query: 94  GPVWKAYCNGRKVGYAVRRKPSEKDLVVVQS 2
             VW+A CNGR VG+AVRR+P+E D  V+ S
Sbjct: 149 SSVWRASCNGRDVGHAVRRRPTEWDRQVLDS 179


>gb|AAT68730.1| hypothetical protein At1g76610 [Arabidopsis thaliana]
          Length = 226

 Score =  100 bits (248), Expect = 2e-19
 Identities = 51/88 (57%), Positives = 65/88 (73%), Gaps = 2/88 (2%)
 Frame = -2

Query: 274 YGHRRGHVSFCVQSD--PAVPPPFLYEISVPTALLAREMSSGFVRMSLECSFASRRSTRC 101
           YGHRRGHVSFC+Q D  P+ PP  L E++VPTA LAREM  GF+R++L  S ++RRS+  
Sbjct: 81  YGHRRGHVSFCLQDDTRPSSPPLLLLELAVPTAALAREMEEGFLRIALR-SKSNRRSSIF 139

Query: 100 GAGPVWKAYCNGRKVGYAVRRKPSEKDL 17
              PVW  YCNGRK G+AVRR+ +E D+
Sbjct: 140 NV-PVWSMYCNGRKFGFAVRRETTENDV 166


>ref|NP_177787.1| uncharacterized protein [Arabidopsis thaliana]
           gi|12323988|gb|AAG51959.1|AC015450_20 hypothetical
           protein; 87351-88031 [Arabidopsis thaliana]
           gi|55740535|gb|AAV63860.1| hypothetical protein
           At1g76610 [Arabidopsis thaliana]
           gi|332197743|gb|AEE35864.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 226

 Score =  100 bits (248), Expect = 2e-19
 Identities = 51/88 (57%), Positives = 65/88 (73%), Gaps = 2/88 (2%)
 Frame = -2

Query: 274 YGHRRGHVSFCVQSD--PAVPPPFLYEISVPTALLAREMSSGFVRMSLECSFASRRSTRC 101
           YGHRRGHVSFC+Q D  P+ PP  L E++VPTA LAREM  GF+R++L  S ++RRS+  
Sbjct: 81  YGHRRGHVSFCLQDDTRPSSPPLLLLELAVPTAALAREMEEGFLRIALR-SKSNRRSSIF 139

Query: 100 GAGPVWKAYCNGRKVGYAVRRKPSEKDL 17
              PVW  YCNGRK G+AVRR+ +E D+
Sbjct: 140 NV-PVWSMYCNGRKFGFAVRRETTENDV 166


>ref|XP_002437538.1| hypothetical protein SORBIDRAFT_10g029010 [Sorghum bicolor]
           gi|241915761|gb|EER88905.1| hypothetical protein
           SORBIDRAFT_10g029010 [Sorghum bicolor]
          Length = 274

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 50/100 (50%), Positives = 66/100 (66%), Gaps = 9/100 (9%)
 Frame = -2

Query: 274 YGHRRGHVSFCVQSDPAVPPPFLYEISVPTALLAREMSSGFVRMSLECSFASRRSTRCGA 95
           +G R G V+FCVQ D AVPPPFL+E+SVP   LA EM SG +R++LEC   +   T  G+
Sbjct: 94  FGRRAGRVTFCVQRDAAVPPPFLFELSVPMQSLATEMGSGLLRIALECHRGTGTGTGTGS 153

Query: 94  G---------PVWKAYCNGRKVGYAVRRKPSEKDLVVVQS 2
           G          +WKA CNGR VG+AVRR+P++ D  V++S
Sbjct: 154 GHGGGGGESRNLWKASCNGRDVGHAVRRRPTDWDRRVLES 193


Top