BLASTX nr result

ID: Dioscorea21_contig00028748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028748
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302513.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002326823.1| predicted protein [Populus trichocarpa] gi|1...    64   1e-08
ref|XP_002511640.1| conserved hypothetical protein [Ricinus comm...    63   2e-08
ref|XP_002277033.1| PREDICTED: uncharacterized protein LOC100244...    59   5e-07
emb|CAN77635.1| hypothetical protein VITISV_002322 [Vitis vinifera]    59   5e-07

>ref|XP_002302513.1| predicted protein [Populus trichocarpa] gi|222844239|gb|EEE81786.1|
           predicted protein [Populus trichocarpa]
          Length = 131

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 47/111 (42%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
 Frame = -2

Query: 408 YCSNYYDDIQSATSSICDWCLSEQRNACAXXXXXXXXXTHLMISKKQQAHHDHKDV--GR 235
           YCSNYY +  S    +CDWC SE+RNA            H   SKK  A HD   V   R
Sbjct: 34  YCSNYYSEF-SEPIELCDWCQSEERNA-----------RHGNSSKKSGAGHDGGIVVTKR 81

Query: 234 SEYSSMDKIKQTSDREE---VANRQXXXXXXXXXXXXXXGRRYKLLKDVLC 91
           SEY+   KIKQ  DREE    ++ Q               RRYKLLKDV+C
Sbjct: 82  SEYTGDHKIKQ-HDREENSTTSSDQKGKNPSGIPSPRPSTRRYKLLKDVMC 131


>ref|XP_002326823.1| predicted protein [Populus trichocarpa] gi|118487002|gb|ABK95332.1|
           unknown [Populus trichocarpa]
           gi|222835138|gb|EEE73573.1| predicted protein [Populus
           trichocarpa]
          Length = 131

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 46/111 (41%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
 Frame = -2

Query: 408 YCSNYYDDIQSATSSICDWCLSEQRNACAXXXXXXXXXTHLMISKKQQAHHDHKDV--GR 235
           YCSNYY +        CDWC SE+RNA            H   SKK  A HD   +   R
Sbjct: 34  YCSNYYGEFSEPIEQ-CDWCQSEERNA-----------RHGNSSKKSGAEHDSGTLVTKR 81

Query: 234 SEYSSMDKIKQTSDREE---VANRQXXXXXXXXXXXXXXGRRYKLLKDVLC 91
           SEYS   KIKQ  DREE    ++ Q               RRYKLLKDV+C
Sbjct: 82  SEYSGDHKIKQ-HDREENSTTSSDQKGKNPSGIPSPRPTTRRYKLLKDVMC 131


>ref|XP_002511640.1| conserved hypothetical protein [Ricinus communis]
           gi|223548820|gb|EEF50309.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 125

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 46/107 (42%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
 Frame = -2

Query: 408 YCSNYYDDIQSATSSICDWCLSEQRNACAXXXXXXXXXTHLMISKKQQAHHDHKDV-GRS 232
           YCSNYY ++ S    +CDWC SE+RNA            H   SKK    HD   V  RS
Sbjct: 34  YCSNYYREL-SEPIELCDWCQSEERNA-----------RHGNSSKKSVTGHDIGGVTNRS 81

Query: 231 EYSSMDKIKQTSDREEVANRQXXXXXXXXXXXXXXGRRYKLLKDVLC 91
           EYS  DKIKQ  DRE+ +  +               RRYKLLKDV+C
Sbjct: 82  EYSG-DKIKQ-HDRED-STAEKGKSPSGAPSPRTATRRYKLLKDVMC 125


>ref|XP_002277033.1| PREDICTED: uncharacterized protein LOC100244418 [Vitis vinifera]
           gi|297734566|emb|CBI16617.3| unnamed protein product
           [Vitis vinifera]
          Length = 126

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 42/106 (39%), Positives = 51/106 (48%)
 Frame = -2

Query: 408 YCSNYYDDIQSATSSICDWCLSEQRNACAXXXXXXXXXTHLMISKKQQAHHDHKDVGRSE 229
           YCSNYY +  S    +CDWC +E+R+A            H   SKK     +     RSE
Sbjct: 36  YCSNYYSE-SSERMEVCDWCQTEERSA----------TRHGSSSKKSVGGLEAGVTSRSE 84

Query: 228 YSSMDKIKQTSDREEVANRQXXXXXXXXXXXXXXGRRYKLLKDVLC 91
           YS  DKIKQ  DREE  + +               RRYKLLKDV+C
Sbjct: 85  YSG-DKIKQ-HDREE--SGEKGKNPSGAPSPRPTTRRYKLLKDVMC 126


>emb|CAN77635.1| hypothetical protein VITISV_002322 [Vitis vinifera]
          Length = 151

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 42/106 (39%), Positives = 51/106 (48%)
 Frame = -2

Query: 408 YCSNYYDDIQSATSSICDWCLSEQRNACAXXXXXXXXXTHLMISKKQQAHHDHKDVGRSE 229
           YCSNYY +  S    +CDWC +E+R+A            H   SKK     +     RSE
Sbjct: 61  YCSNYYSE-SSERMEVCDWCQTEERSA----------TRHGSSSKKSVGGLEAGVTSRSE 109

Query: 228 YSSMDKIKQTSDREEVANRQXXXXXXXXXXXXXXGRRYKLLKDVLC 91
           YS  DKIKQ  DREE  + +               RRYKLLKDV+C
Sbjct: 110 YSG-DKIKQ-HDREE--SGEKGKNPSGAPSPRPTTRRYKLLKDVMC 151


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