BLASTX nr result

ID: Dioscorea21_contig00028746 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028746
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526275.1| eukaryotic translation initiation factor 2c,...    91   7e-17
tpg|DAA36422.1| TPA: putative argonaute family protein [Zea mays]      89   4e-16
ref|XP_002448347.1| hypothetical protein SORBIDRAFT_06g025560 [S...    89   4e-16
gb|AFW59176.1| putative argonaute family protein [Zea mays]            86   2e-15
ref|XP_002318338.1| argonaute protein group [Populus trichocarpa...    86   3e-15

>ref|XP_002526275.1| eukaryotic translation initiation factor 2c, putative [Ricinus
           communis] gi|223534406|gb|EEF36112.1| eukaryotic
           translation initiation factor 2c, putative [Ricinus
           communis]
          Length = 1063

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 62/134 (46%), Positives = 73/134 (54%), Gaps = 28/134 (20%)
 Frame = +1

Query: 76  GPTPQSRGSIPRRQF----HGTRRGSSGRFSP--AGPSQPPAPELHQAM----------P 207
           GP  Q RG  P +Q     +G  R SS R  P   GPS+PP PELHQA            
Sbjct: 80  GPEYQGRGRGPPQQGGRGGYGGGRSSSNRGGPPSVGPSRPPVPELHQATLAPYQAGVSPQ 139

Query: 208 MAPSQGSAFLIPSHE------QQFQQLSIHGEASSSHGI------SKSIRFPQRPGIGTT 351
           + PS+GS+   P         QQ Q+LSI  E SSS  I      SKS+RFP RPG G+T
Sbjct: 140 LMPSEGSSSSGPPEPSPVVVAQQMQELSIQQEVSSSQPIQAPPPSSKSMRFPLRPGKGST 199

Query: 352 GSKCVVKANHFFAE 393
           G +C+VKANHFFAE
Sbjct: 200 GIRCIVKANHFFAE 213


>tpg|DAA36422.1| TPA: putative argonaute family protein [Zea mays]
          Length = 1078

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 55/124 (44%), Positives = 69/124 (55%), Gaps = 22/124 (17%)
 Frame = +1

Query: 88  QSRGSIPRRQFHGTRRGSSGRFSPAGPSQPPAPELHQA------------MPMAPSQGSA 231
           +SRG I +  + G R GS GR  P GPS+   PELHQA             P  P   S 
Sbjct: 107 RSRGGISQPYYGGHRGGSVGRNVPPGPSRT-VPELHQAPYVQYQAPVISPSPSGPGSSSQ 165

Query: 232 FLIPSH----EQQFQQLSIHGEASSSHGI------SKSIRFPQRPGIGTTGSKCVVKANH 381
            +        +QQF+QL+IHG++S S  +      SKS+RFP RPG GT G +C+VKANH
Sbjct: 166 PMAEVSSGQVQQQFEQLAIHGQSSMSQEVQVAPASSKSVRFPLRPGKGTYGDRCIVKANH 225

Query: 382 FFAE 393
           FFAE
Sbjct: 226 FFAE 229


>ref|XP_002448347.1| hypothetical protein SORBIDRAFT_06g025560 [Sorghum bicolor]
           gi|241939530|gb|EES12675.1| hypothetical protein
           SORBIDRAFT_06g025560 [Sorghum bicolor]
          Length = 1082

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 56/124 (45%), Positives = 72/124 (58%), Gaps = 22/124 (17%)
 Frame = +1

Query: 88  QSRGSIPRRQFHGTRRGSSGRFSPAGPSQPPAPELHQA---------MPMAPSQGSAFLI 240
           +SRG +P+  + G R G+ GR  P GPS+   PELHQA         +  +PS   +   
Sbjct: 111 RSRGGMPQPYYGGHRGGNVGRNVPPGPSRT-VPELHQAPYVQYQAPVVSQSPSGPGSSSQ 169

Query: 241 PSHE-------QQFQQLSIHGEASSSHGI------SKSIRFPQRPGIGTTGSKCVVKANH 381
           P  E       QQFQQL+I G++S+S  I      SKS+RFP RPG GT G +C+VKANH
Sbjct: 170 PVAEVSSGQVQQQFQQLAIRGQSSTSQEIQVAPASSKSVRFPLRPGKGTYGDRCIVKANH 229

Query: 382 FFAE 393
           FFAE
Sbjct: 230 FFAE 233


>gb|AFW59176.1| putative argonaute family protein [Zea mays]
          Length = 1092

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 54/124 (43%), Positives = 69/124 (55%), Gaps = 22/124 (17%)
 Frame = +1

Query: 88  QSRGSIPRRQFHGTRRGSSGRFSPAGPSQPPAPELHQA------------MPMAPSQGSA 231
           +SRG +P+  + G R G+ GR  P GPS+   PELHQA             P  P   S 
Sbjct: 113 RSRGGMPQPYYGGHRGGNVGRNVPPGPSRT-VPELHQAPYVQYPAPVVSPSPSGPGSSSQ 171

Query: 232 FLIPSH----EQQFQQLSIHGEASSSHGI------SKSIRFPQRPGIGTTGSKCVVKANH 381
            +        +QQFQQL+  G++S+S  I      SKS+RFP RPG GT G +C+VKANH
Sbjct: 172 PMAEVSSGQVQQQFQQLADRGQSSTSQEIQVAPASSKSVRFPLRPGKGTYGDRCIVKANH 231

Query: 382 FFAE 393
           FFAE
Sbjct: 232 FFAE 235


>ref|XP_002318338.1| argonaute protein group [Populus trichocarpa]
           gi|222859011|gb|EEE96558.1| argonaute protein group
           [Populus trichocarpa]
          Length = 1062

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 53/114 (46%), Positives = 64/114 (56%), Gaps = 23/114 (20%)
 Frame = +1

Query: 121 HGTRRGSSGRFSPA-GPSQPPAPELHQAMPM----------APSQGSAFLIPSH------ 249
           +G  R   GR  P+ G  +PPAPELHQA P            PS+ S+ + P        
Sbjct: 100 YGGGRPGGGRGGPSSGGFRPPAPELHQATPAPYPAVVTTQPTPSEASSSMRPPEPSLATV 159

Query: 250 EQQFQQLSIHGEASSSHGI------SKSIRFPQRPGIGTTGSKCVVKANHFFAE 393
            QQ QQLS+  E SSS  I      SKS+RFP RPG G+TG +C+VKANHFFAE
Sbjct: 160 SQQLQQLSVEQEGSSSQAIQPLPASSKSVRFPLRPGKGSTGIRCIVKANHFFAE 213


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