BLASTX nr result

ID: Dioscorea21_contig00028739 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028739
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302911.1| cc-nbs-lrr resistance protein [Populus trich...    74   9e-12
ref|XP_002334156.1| cc-nbs-lrr resistance protein [Populus trich...    74   2e-11
ref|XP_002334072.1| cc-nbs-lrr resistance protein [Populus trich...    71   8e-11
dbj|BAH01414.1| unnamed protein product [Oryza sativa Japonica G...    70   2e-10
ref|NP_001055913.1| Os05g0492200 [Oryza sativa Japonica Group] g...    70   2e-10

>ref|XP_002302911.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222844637|gb|EEE82184.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1053

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 43/115 (37%), Positives = 67/115 (58%), Gaps = 4/115 (3%)
 Frame = +1

Query: 1   LFSNTLEMIKELSTLHALQYLETIWSGVDEQLQKLQFSLLLIQPLVEDAEARQLKEQAVR 180
           + S  +  I E  +L AL+     W G+D +L+ L+ +  ++Q +++DAE +Q K +A++
Sbjct: 5   IVSALVSPILENLSLQALKEAGLAW-GLDTELENLESTFAIVQAVLQDAEEKQWKNEALK 63

Query: 181 CWLVWLKDAVYDAEDILD----EAKTHELLIQRKAELSGRPRSKVREFFSLDHNP 333
            WL  LKDA YD +D+LD    EA+ H L    K        +++R FFSLDHNP
Sbjct: 64  IWLRSLKDAAYDVDDVLDDFAIEAQRHRLQKDLK--------NRLRSFFSLDHNP 110


>ref|XP_002334156.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222869855|gb|EEF06986.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 826

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 40/111 (36%), Positives = 66/111 (59%)
 Frame = +1

Query: 1   LFSNTLEMIKELSTLHALQYLETIWSGVDEQLQKLQFSLLLIQPLVEDAEARQLKEQAVR 180
           + S  +  I E  +L AL+     W G+D +L+ L+ +  ++Q +++DAE +Q K +A+ 
Sbjct: 5   IVSALVSPILENLSLQALKEAGLAW-GLDTELENLESTFAIVQAVLQDAEEKQWKNKALE 63

Query: 181 CWLVWLKDAVYDAEDILDEAKTHELLIQRKAELSGRPRSKVREFFSLDHNP 333
            WL  LKDA YD +D+LD+      +  R+  L    ++++R FFSLDHNP
Sbjct: 64  IWLRRLKDAAYDVDDVLDDF----AIEARRHRLQKDLKNRLRSFFSLDHNP 110


>ref|XP_002334072.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222839772|gb|EEE78095.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1005

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/85 (41%), Positives = 57/85 (67%)
 Frame = +1

Query: 79  GVDEQLQKLQFSLLLIQPLVEDAEARQLKEQAVRCWLVWLKDAVYDAEDILDEAKTHELL 258
           G+  + +KL+ + + +Q +++DAE +Q K++A+R WL  LKDA YDA+D+LDE     + 
Sbjct: 30  GIQTEFEKLKRTFMTVQAVLKDAEEKQWKDEAIRIWLTDLKDAAYDADDVLDE---FAIE 86

Query: 259 IQRKAELSGRPRSKVREFFSLDHNP 333
            QR+ +  G  +++VR  FSLD NP
Sbjct: 87  AQRRRQRGGL-KNRVRSSFSLDQNP 110


>dbj|BAH01414.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 1124

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 38/78 (48%), Positives = 47/78 (60%)
 Frame = +1

Query: 82  VDEQLQKLQFSLLLIQPLVEDAEARQLKEQAVRCWLVWLKDAVYDAEDILDEAKTHELLI 261
           + E+LQKL  SL  IQ  VEDAEARQLK++A R WL  LKD  Y+ +D+LDE     L  
Sbjct: 33  IAEELQKLSSSLSTIQAHVEDAEARQLKDRAARSWLAKLKDVAYEMDDLLDEYAAETLQS 92

Query: 262 QRKAELSGRPRSKVREFF 315
           + +     R  SKVR  F
Sbjct: 93  ELEGSSRSRHLSKVRSSF 110


>ref|NP_001055913.1| Os05g0492200 [Oryza sativa Japonica Group]
           gi|113579464|dbj|BAF17827.1| Os05g0492200, partial
           [Oryza sativa Japonica Group]
          Length = 375

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 38/78 (48%), Positives = 47/78 (60%)
 Frame = +1

Query: 82  VDEQLQKLQFSLLLIQPLVEDAEARQLKEQAVRCWLVWLKDAVYDAEDILDEAKTHELLI 261
           + E+LQKL  SL  IQ  VEDAEARQLK++A R WL  LKD  Y+ +D+LDE     L  
Sbjct: 33  IAEELQKLSSSLSTIQAHVEDAEARQLKDRAARSWLAKLKDVAYEMDDLLDEYAAETLQS 92

Query: 262 QRKAELSGRPRSKVREFF 315
           + +     R  SKVR  F
Sbjct: 93  ELEGSSRSRHLSKVRSSF 110


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