BLASTX nr result
ID: Dioscorea21_contig00028721
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00028721 (640 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002284159.1| PREDICTED: uncharacterized protein LOC100254... 78 2e-12 ref|NP_564929.1| uncharacterized protein [Arabidopsis thaliana] ... 55 9e-06 ref|XP_002887085.1| hypothetical protein ARALYDRAFT_475783 [Arab... 55 9e-06 >ref|XP_002284159.1| PREDICTED: uncharacterized protein LOC100254978 [Vitis vinifera] Length = 150 Score = 77.8 bits (190), Expect = 2e-12 Identities = 62/159 (38%), Positives = 71/159 (44%), Gaps = 11/159 (6%) Frame = -2 Query: 576 MATLQLFKLFGMQCTTVSQSPSRSPVGKRAAAASGSPSVQLRRRVTLKKLLSRSPSRRFV 397 MATLQ FKL QC V+ SP+RSP + SP V LRRR TL+ LLSR+ RR Sbjct: 1 MATLQKFKLLATQCA-VAGSPTRSP--------TTSPVVHLRRRKTLRMLLSRNAGRRMS 51 Query: 396 PRGK---PSGGKPADPEERKGL-LSHTLRDLLVSSPPXXXXXXXXXXXXXXXXXXXXXXX 229 R P G P K L SH L+DL +SSPP Sbjct: 52 RRDSSPDPPGISEDPPRRPKELSASHKLKDLFISSPPLEDRVSEKVRSSVDELPTAESTE 111 Query: 228 XXXXXXXXXXXXSL-------RQRLMRRAWRPVLVAIPE 133 + RQRL+RRAWRPVLV IPE Sbjct: 112 NSGSGGRRGGPSYIRPLSAAFRQRLLRRAWRPVLVTIPE 150 >ref|NP_564929.1| uncharacterized protein [Arabidopsis thaliana] gi|6714348|gb|AAF26039.1|AC015986_2 hypothetical protein; 11689-12129 [Arabidopsis thaliana] gi|21536520|gb|AAM60852.1| unknown [Arabidopsis thaliana] gi|98960885|gb|ABF58926.1| At1g68430 [Arabidopsis thaliana] gi|332196672|gb|AEE34793.1| uncharacterized protein [Arabidopsis thaliana] Length = 146 Score = 55.5 bits (132), Expect = 9e-06 Identities = 42/93 (45%), Positives = 49/93 (52%), Gaps = 2/93 (2%) Frame = -2 Query: 576 MATLQLFKLFGMQCTTVSQSPSRSPVGKRAAAASGSPSVQLRR-RVTLKKLLS-RSPSRR 403 MATLQ FK G QC +QSP+RSP + SP VQLRR + TLK LLS SPSRR Sbjct: 1 MATLQRFKFLGTQCGVAAQSPTRSP------SPRTSPLVQLRRKKTTLKMLLSLASPSRR 54 Query: 402 FVPRGKPSGGKPADPEERKGLLSHTLRDLLVSS 304 +P K + L+DL VSS Sbjct: 55 --------EQQPLIHHHHKDVAGRKLKDLFVSS 79 >ref|XP_002887085.1| hypothetical protein ARALYDRAFT_475783 [Arabidopsis lyrata subsp. lyrata] gi|297332926|gb|EFH63344.1| hypothetical protein ARALYDRAFT_475783 [Arabidopsis lyrata subsp. lyrata] Length = 159 Score = 55.5 bits (132), Expect = 9e-06 Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 1/92 (1%) Frame = -2 Query: 570 TLQLFKLFGMQCTTVSQSPSRSPVGKRAAAASGSPSVQLRRRVTLKKLLSRSPSRRFVPR 391 +LQ FKL C+TV++SP+RSPV + LRRR TL+ LL+RS R +P Sbjct: 2 SLQKFKLLATHCSTVAESPTRSPV------------IHLRRRKTLRLLLTRSSDRWRLPE 49 Query: 390 GKPSGGKPADPEERKGLLS-HTLRDLLVSSPP 298 + + + ++R + S LR+L VSSPP Sbjct: 50 IQNNVDESKKSDKRDKIRSRRKLRELFVSSPP 81