BLASTX nr result

ID: Dioscorea21_contig00028721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028721
         (640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284159.1| PREDICTED: uncharacterized protein LOC100254...    78   2e-12
ref|NP_564929.1| uncharacterized protein [Arabidopsis thaliana] ...    55   9e-06
ref|XP_002887085.1| hypothetical protein ARALYDRAFT_475783 [Arab...    55   9e-06

>ref|XP_002284159.1| PREDICTED: uncharacterized protein LOC100254978 [Vitis vinifera]
          Length = 150

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 62/159 (38%), Positives = 71/159 (44%), Gaps = 11/159 (6%)
 Frame = -2

Query: 576 MATLQLFKLFGMQCTTVSQSPSRSPVGKRAAAASGSPSVQLRRRVTLKKLLSRSPSRRFV 397
           MATLQ FKL   QC  V+ SP+RSP        + SP V LRRR TL+ LLSR+  RR  
Sbjct: 1   MATLQKFKLLATQCA-VAGSPTRSP--------TTSPVVHLRRRKTLRMLLSRNAGRRMS 51

Query: 396 PRGK---PSGGKPADPEERKGL-LSHTLRDLLVSSPPXXXXXXXXXXXXXXXXXXXXXXX 229
            R     P G     P   K L  SH L+DL +SSPP                       
Sbjct: 52  RRDSSPDPPGISEDPPRRPKELSASHKLKDLFISSPPLEDRVSEKVRSSVDELPTAESTE 111

Query: 228 XXXXXXXXXXXXSL-------RQRLMRRAWRPVLVAIPE 133
                        +       RQRL+RRAWRPVLV IPE
Sbjct: 112 NSGSGGRRGGPSYIRPLSAAFRQRLLRRAWRPVLVTIPE 150


>ref|NP_564929.1| uncharacterized protein [Arabidopsis thaliana]
           gi|6714348|gb|AAF26039.1|AC015986_2 hypothetical
           protein; 11689-12129 [Arabidopsis thaliana]
           gi|21536520|gb|AAM60852.1| unknown [Arabidopsis
           thaliana] gi|98960885|gb|ABF58926.1| At1g68430
           [Arabidopsis thaliana] gi|332196672|gb|AEE34793.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 146

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 42/93 (45%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
 Frame = -2

Query: 576 MATLQLFKLFGMQCTTVSQSPSRSPVGKRAAAASGSPSVQLRR-RVTLKKLLS-RSPSRR 403
           MATLQ FK  G QC   +QSP+RSP      +   SP VQLRR + TLK LLS  SPSRR
Sbjct: 1   MATLQRFKFLGTQCGVAAQSPTRSP------SPRTSPLVQLRRKKTTLKMLLSLASPSRR 54

Query: 402 FVPRGKPSGGKPADPEERKGLLSHTLRDLLVSS 304
                     +P      K +    L+DL VSS
Sbjct: 55  --------EQQPLIHHHHKDVAGRKLKDLFVSS 79


>ref|XP_002887085.1| hypothetical protein ARALYDRAFT_475783 [Arabidopsis lyrata subsp.
           lyrata] gi|297332926|gb|EFH63344.1| hypothetical protein
           ARALYDRAFT_475783 [Arabidopsis lyrata subsp. lyrata]
          Length = 159

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
 Frame = -2

Query: 570 TLQLFKLFGMQCTTVSQSPSRSPVGKRAAAASGSPSVQLRRRVTLKKLLSRSPSRRFVPR 391
           +LQ FKL    C+TV++SP+RSPV            + LRRR TL+ LL+RS  R  +P 
Sbjct: 2   SLQKFKLLATHCSTVAESPTRSPV------------IHLRRRKTLRLLLTRSSDRWRLPE 49

Query: 390 GKPSGGKPADPEERKGLLS-HTLRDLLVSSPP 298
            + +  +    ++R  + S   LR+L VSSPP
Sbjct: 50  IQNNVDESKKSDKRDKIRSRRKLRELFVSSPP 81


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