BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028705
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002863397.1| pentatricopeptide repeat-containing protein ...    77   2e-12
ref|NP_199470.1| pentatricopeptide repeat-containing protein [Ar...    74   9e-12
dbj|BAJ88173.1| predicted protein [Hordeum vulgare subsp. vulgar...    74   2e-11
ref|XP_003608637.1| Pentatricopeptide repeat-containing protein ...    73   2e-11
dbj|BAJ85867.1| predicted protein [Hordeum vulgare subsp. vulgare]     72   4e-11

>ref|XP_002863397.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297309232|gb|EFH39656.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 711

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 37/79 (46%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
 Frame = +2

Query: 2   TCLIQCLGKGKRIGDAVKVFDIALQRGIKPDDRXXXXXXXXXXXXEDGE-VDAVLGCLEK 178
           TCL+QCLGK KRI D V VFD+++QRG+KPDDR            E  E  + V+ CLE+
Sbjct: 471 TCLVQCLGKAKRIDDLVYVFDLSIQRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLER 530

Query: 179 GNARLVEFVKMLGSEEVGF 235
            N +LV FV ++  E+  F
Sbjct: 531 ANRKLVTFVNLIVDEKTEF 549


>ref|NP_199470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75180372|sp|Q9LS25.1|PP420_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g46580, chloroplastic; Flags: Precursor
           gi|8885599|dbj|BAA97529.1| unnamed protein product
           [Arabidopsis thaliana] gi|332008017|gb|AED95400.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 711

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 35/79 (44%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
 Frame = +2

Query: 2   TCLIQCLGKGKRIGDAVKVFDIALQRGIKPDDRXXXXXXXXXXXXEDGE-VDAVLGCLEK 178
           TCL+QCLGK KRI D V VFD++++RG+KPDDR            E  E  + V+ CLE+
Sbjct: 471 TCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLER 530

Query: 179 GNARLVEFVKMLGSEEVGF 235
            N +LV FV ++  E+  +
Sbjct: 531 ANKKLVTFVNLIVDEKTEY 549


>dbj|BAJ88173.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326527987|dbj|BAJ89045.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 706

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 36/77 (46%), Positives = 47/77 (61%)
 Frame = +2

Query: 2   TCLIQCLGKGKRIGDAVKVFDIALQRGIKPDDRXXXXXXXXXXXXEDGEVDAVLGCLEKG 181
           T +IQCLGK  RI DAV+V +  L+RG+KPDDR               E + VL CLEK 
Sbjct: 465 TIVIQCLGKANRIRDAVEVLEAGLERGLKPDDRLCGCLLSVVALSTGEETELVLACLEKF 524

Query: 182 NARLVEFVKMLGSEEVG 232
           N  LV+ ++MLG ++VG
Sbjct: 525 NRNLVKLIRMLGDDQVG 541


>ref|XP_003608637.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355509692|gb|AES90834.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 715

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 35/79 (44%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
 Frame = +2

Query: 2   TCLIQCLGKGKRIGDAVKVFDIALQRGIKPDDRXXXXXXXXXXXXEDG-EVDAVLGCLEK 178
           TCLIQCLGK   I D VKVFDI+++RG+KPDDR            +   + + VL CL++
Sbjct: 475 TCLIQCLGKAMEIDDLVKVFDISVERGVKPDDRLCGCLLSVVSLSQGSKDQEKVLACLQR 534

Query: 179 GNARLVEFVKMLGSEEVGF 235
            N +LV F++++  EE  F
Sbjct: 535 ANPKLVAFIQLIVDEETSF 553


>dbj|BAJ85867.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 706

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 35/77 (45%), Positives = 47/77 (61%)
 Frame = +2

Query: 2   TCLIQCLGKGKRIGDAVKVFDIALQRGIKPDDRXXXXXXXXXXXXEDGEVDAVLGCLEKG 181
           T +IQCLGK  RI DAV++ +  L+RG+KPDDR               E + VL CLEK 
Sbjct: 465 TIVIQCLGKANRIRDAVEMLEAGLERGLKPDDRLCGCLLSVVALSTGEETELVLACLEKF 524

Query: 182 NARLVEFVKMLGSEEVG 232
           N  LV+ ++MLG ++VG
Sbjct: 525 NRNLVKLIRMLGDDQVG 541