BLASTX nr result

ID: Dioscorea21_contig00028682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028682
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002866272.1| hypothetical protein ARALYDRAFT_495970 [Arab...    67   1e-09
ref|NP_200659.2| uncharacterized protein [Arabidopsis thaliana] ...    67   1e-09
emb|CBI15906.3| unnamed protein product [Vitis vinifera]               67   2e-09
ref|XP_002278308.1| PREDICTED: rab3 GTPase-activating protein ca...    67   2e-09
emb|CAN60454.1| hypothetical protein VITISV_019552 [Vitis vinifera]    67   2e-09

>ref|XP_002866272.1| hypothetical protein ARALYDRAFT_495970 [Arabidopsis lyrata subsp.
           lyrata] gi|297312107|gb|EFH42531.1| hypothetical protein
           ARALYDRAFT_495970 [Arabidopsis lyrata subsp. lyrata]
          Length = 963

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/42 (71%), Positives = 35/42 (83%)
 Frame = +3

Query: 105 TIASSWERFISEIEAVCRLWLFDGPKNLVDKGAECLDHPKNL 230
           T+ASSWERFIS+IEA CR WL DGPKNLV+KGA  ++  KNL
Sbjct: 27  TLASSWERFISDIEATCRQWLADGPKNLVEKGAVAVEDSKNL 68


>ref|NP_200659.2| uncharacterized protein [Arabidopsis thaliana]
           gi|20259512|gb|AAM13876.1| unknown protein [Arabidopsis
           thaliana] gi|21436471|gb|AAM51436.1| unknown protein
           [Arabidopsis thaliana] gi|332009678|gb|AED97061.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 963

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/42 (71%), Positives = 35/42 (83%)
 Frame = +3

Query: 105 TIASSWERFISEIEAVCRLWLFDGPKNLVDKGAECLDHPKNL 230
           T+ASSWERFIS+IEA CR WL DGPKNLV+KGA  ++  KNL
Sbjct: 27  TLASSWERFISDIEATCRQWLADGPKNLVEKGAVAVEDSKNL 68


>emb|CBI15906.3| unnamed protein product [Vitis vinifera]
          Length = 966

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 31/42 (73%), Positives = 36/42 (85%)
 Frame = +3

Query: 105 TIASSWERFISEIEAVCRLWLFDGPKNLVDKGAECLDHPKNL 230
           T+ASSWERFISEIEAVCRLWL DGPKNL++KGA  L   ++L
Sbjct: 25  TLASSWERFISEIEAVCRLWLADGPKNLLEKGAVHLGFSRDL 66


>ref|XP_002278308.1| PREDICTED: rab3 GTPase-activating protein catalytic subunit-like
           [Vitis vinifera]
          Length = 891

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 31/42 (73%), Positives = 36/42 (85%)
 Frame = +3

Query: 105 TIASSWERFISEIEAVCRLWLFDGPKNLVDKGAECLDHPKNL 230
           T+ASSWERFISEIEAVCRLWL DGPKNL++KGA  L   ++L
Sbjct: 25  TLASSWERFISEIEAVCRLWLADGPKNLLEKGAVHLGFSRDL 66


>emb|CAN60454.1| hypothetical protein VITISV_019552 [Vitis vinifera]
          Length = 494

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 31/42 (73%), Positives = 36/42 (85%)
 Frame = +3

Query: 105 TIASSWERFISEIEAVCRLWLFDGPKNLVDKGAECLDHPKNL 230
           T+ASSWERFISEIEAVCRLWL DGPKNL++KGA  L   ++L
Sbjct: 25  TLASSWERFISEIEAVCRLWLADGPKNLLEKGAVHLGFSRDL 66


Top