BLASTX nr result

ID: Dioscorea21_contig00028660 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028660
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553922.1| PREDICTED: RING-H2 finger protein ATL46-like...   102   2e-20
ref|XP_003543381.1| PREDICTED: RING-H2 finger protein ATL46-like...   100   2e-19
gb|ACI42847.1| RING finger protein [Glycine max]                      100   2e-19
ref|NP_001056919.1| Os06g0167200 [Oryza sativa Japonica Group] g...    97   2e-18
gb|EEC80090.1| hypothetical protein OsI_21827 [Oryza sativa Indi...    97   2e-18

>ref|XP_003553922.1| PREDICTED: RING-H2 finger protein ATL46-like isoform 1 [Glycine
           max] gi|356571517|ref|XP_003553923.1| PREDICTED: RING-H2
           finger protein ATL46-like isoform 2 [Glycine max]
          Length = 386

 Score =  102 bits (255), Expect = 2e-20
 Identities = 57/95 (60%), Positives = 69/95 (72%), Gaps = 6/95 (6%)
 Frame = -3

Query: 270 EVGESSSSNLDARRCYSLGSYQYVVGNANLRVSLPGLKIVR---EKKLSGSSNSDG---A 109
           EVGE+SSSNLDARRC+S+GSYQYVVGN++LRV+L   +I +    +   G    DG    
Sbjct: 267 EVGETSSSNLDARRCFSMGSYQYVVGNSDLRVALNHDEISKGQVTRLNKGMELDDGKLSV 326

Query: 108 EDGGGKKIGATSRGDSFSTSKIWMWPNKKGKLPPS 4
           ED  GKKI + S+GDSFS SKIW+WP KKGKLP S
Sbjct: 327 EDVEGKKISSVSKGDSFSVSKIWLWP-KKGKLPTS 360


>ref|XP_003543381.1| PREDICTED: RING-H2 finger protein ATL46-like [Glycine max]
          Length = 410

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 57/97 (58%), Positives = 69/97 (71%), Gaps = 8/97 (8%)
 Frame = -3

Query: 270 EVGESSSSNLDARRCYSLGSYQYVVGNANLRVSLPGLKIVR---EKKLSGSSNSDG---A 109
           EVGE+SSSNLDARRCYS+GSYQYVVGN++LRV+L   +I +    +   G    DG    
Sbjct: 289 EVGETSSSNLDARRCYSMGSYQYVVGNSDLRVTLNHDEIGKGQVTRLTKGMELDDGKVSV 348

Query: 108 EDGG--GKKIGATSRGDSFSTSKIWMWPNKKGKLPPS 4
           E+G    KKI + S+GDSFS SKIW+WP KKGKLP S
Sbjct: 349 EEGDVEAKKISSVSKGDSFSVSKIWLWP-KKGKLPTS 384


>gb|ACI42847.1| RING finger protein [Glycine max]
          Length = 392

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 57/97 (58%), Positives = 69/97 (71%), Gaps = 8/97 (8%)
 Frame = -3

Query: 270 EVGESSSSNLDARRCYSLGSYQYVVGNANLRVSLPGLKIVR---EKKLSGSSNSDG---A 109
           EVGE+SSSNLDARRCYS+GSYQYVVGN++LRV+L   +I +    +   G    DG    
Sbjct: 271 EVGETSSSNLDARRCYSMGSYQYVVGNSDLRVTLNHDEIGKGQVTRLTKGMELDDGKVSV 330

Query: 108 EDGG--GKKIGATSRGDSFSTSKIWMWPNKKGKLPPS 4
           E+G    KKI + S+GDSFS SKIW+WP KKGKLP S
Sbjct: 331 EEGDVEAKKISSVSKGDSFSVSKIWLWP-KKGKLPTS 366


>ref|NP_001056919.1| Os06g0167200 [Oryza sativa Japonica Group]
           gi|55296046|dbj|BAD67608.1| putative RING finger 1
           [Oryza sativa Japonica Group]
           gi|55296217|dbj|BAD67958.1| putative RING finger 1
           [Oryza sativa Japonica Group]
           gi|113594959|dbj|BAF18833.1| Os06g0167200 [Oryza sativa
           Japonica Group] gi|125554226|gb|EAY99831.1| hypothetical
           protein OsI_21822 [Oryza sativa Indica Group]
          Length = 363

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 54/96 (56%), Positives = 68/96 (70%), Gaps = 8/96 (8%)
 Frame = -3

Query: 273 REVGESSSSNLDARRCYSLGSYQYVVGNANLRVSL-----PGLKIVREKKLSGS--SNSD 115
           RE GESSSS+LDARRC+S+GSYQYV+  A+L+VS+      G    R + L+G+  + +D
Sbjct: 244 REEGESSSSSLDARRCFSMGSYQYVLAEASLQVSVHRRHGDGNGRARLRGLAGANPAGND 303

Query: 114 GAEDGGGKKIGATSRGDSFSTSKIWMWPNK-KGKLP 10
            A    GKKIGA S+GDSFS SKIW WP + KGKLP
Sbjct: 304 AAAAADGKKIGAGSKGDSFSVSKIWQWPRQGKGKLP 339


>gb|EEC80090.1| hypothetical protein OsI_21827 [Oryza sativa Indica Group]
          Length = 338

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 54/96 (56%), Positives = 68/96 (70%), Gaps = 8/96 (8%)
 Frame = -3

Query: 273 REVGESSSSNLDARRCYSLGSYQYVVGNANLRVSL-----PGLKIVREKKLSGS--SNSD 115
           RE GESSSS+LDARRC+S+GSYQYV+  A+L+VS+      G    R + L+G+  + +D
Sbjct: 219 REEGESSSSSLDARRCFSMGSYQYVLAEASLQVSVHRRHGDGNGRARLRGLAGANPAGND 278

Query: 114 GAEDGGGKKIGATSRGDSFSTSKIWMWPNK-KGKLP 10
            A    GKKIGA S+GDSFS SKIW WP + KGKLP
Sbjct: 279 AAAAADGKKIGAGSKGDSFSVSKIWQWPRQGKGKLP 314


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