BLASTX nr result

ID: Dioscorea21_contig00028620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028620
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001141761.1| uncharacterized protein LOC100273897 [Zea ma...    96   5e-18
ref|XP_002463117.1| hypothetical protein SORBIDRAFT_02g038160 [S...    95   8e-18
ref|NP_001130881.1| uncharacterized protein LOC100191985 [Zea ma...    95   1e-17
ref|XP_002524951.1| Protein FRIGIDA, putative [Ricinus communis]...    91   1e-16
ref|XP_003550989.1| PREDICTED: protein FRIGIDA-like [Glycine max]      88   1e-15

>ref|NP_001141761.1| uncharacterized protein LOC100273897 [Zea mays]
           gi|223948925|gb|ACN28546.1| unknown [Zea mays]
           gi|414887407|tpg|DAA63421.1| TPA: hypothetical protein
           ZEAMMB73_917219 [Zea mays]
          Length = 623

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 67/219 (30%), Positives = 114/219 (52%), Gaps = 28/219 (12%)
 Frame = +1

Query: 1   REATIADREHTLLDRLQEMKDLSVSALVEARKKRKM----------APPMKSGSELGPPR 150
           +EA ++ +EH  L++LQE++D +VS+L E R+K K+          +   K  + +    
Sbjct: 88  KEAKVSTKEHASLNQLQELRDAAVSSLAEVRQKYKVELAEILEASGSKDKKVSTSINDNN 147

Query: 151 GSHKSD---------KVPEANDNEVMTLHELKQFCKKMDVEGVLRYVT--CKRKHFNLYS 297
            S  S+         +  EA   E      LKQ C++MD +G+L++++  C++    L S
Sbjct: 148 ASRASEENTPASGSGEASEALPVETKPRPVLKQLCEQMDTKGLLKFLSENCRK----LAS 203

Query: 298 YYEELSSAIKCAPQPPRLLLNILESLLFPSIPSGSIAKGKDISPNIKFKVCLVLMESVVF 477
           + +ELS A+KCA  P R +LN LE    P   +   +K   +   ++ K C++LME++  
Sbjct: 204 FRDELSVALKCATDPARFVLNSLEGFFPPDQTNSPGSKHNAL--EVQRKSCILLMEAIAP 261

Query: 478 RHGRQK-------YYEIKNQAKAIARKWKATLGRVDLNS 573
             G ++         EIK QAK IA +WK+ L  +DL++
Sbjct: 262 ALGMKEPGGDDPWSSEIKEQAKEIAEEWKSKLAEIDLDA 300


>ref|XP_002463117.1| hypothetical protein SORBIDRAFT_02g038160 [Sorghum bicolor]
           gi|241926494|gb|EER99638.1| hypothetical protein
           SORBIDRAFT_02g038160 [Sorghum bicolor]
          Length = 617

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 68/217 (31%), Positives = 110/217 (50%), Gaps = 26/217 (11%)
 Frame = +1

Query: 1   REATIADREHTLLDRLQEMKDLSVSALVEARKKRKM----------APPMKSGSELGPPR 150
           +E  ++ +E   L++LQE++D +VS+L E R+K K+          +   K  + +    
Sbjct: 88  KETNVSTKERASLNQLQELRDAAVSSLAEVRQKYKVELAEILDASGSKDKKVSTSINDNN 147

Query: 151 GSHKSDK---------VPEANDNEVMTLHELKQFCKKMDVEGVLRYVTCKRKHFNLYSYY 303
            S  S++           EA+  E      LKQ C++MD +G+L++++   +   L S  
Sbjct: 148 ASRASEENTPASGLGEASEASPVETKPRPVLKQLCEQMDTKGLLKFLSENSR--KLASLR 205

Query: 304 EELSSAIKCAPQPPRLLLNILESLLFPSIPSGSIAKGKDISPNIKFKVCLVLMESVVFRH 483
           +ELS A+KCA  P R +LN LE   FP     +    K  +  ++ K C+VLME++    
Sbjct: 206 DELSVALKCATDPARFVLNSLEGF-FPPPEQTNSPGSKHNALEVQRKSCIVLMEAIAPAL 264

Query: 484 GRQK-------YYEIKNQAKAIARKWKATLGRVDLNS 573
           G  +         EIK QAKAIA +WK+ L  VDL++
Sbjct: 265 GTTEPGGNDPWSSEIKEQAKAIAEEWKSKLAEVDLDA 301


>ref|NP_001130881.1| uncharacterized protein LOC100191985 [Zea mays]
           gi|194690346|gb|ACF79257.1| unknown [Zea mays]
           gi|219884345|gb|ACL52547.1| unknown [Zea mays]
           gi|414590726|tpg|DAA41297.1| TPA: hypothetical protein
           ZEAMMB73_480809 [Zea mays]
          Length = 637

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 67/217 (30%), Positives = 111/217 (51%), Gaps = 26/217 (11%)
 Frame = +1

Query: 1   REATIADREHTLLDRLQEMKDLSVSALVEARKKRKM----------APPMKSGSELGPPR 150
           +EA I+ +E   L++LQE++D +VS+L E R+K K+          +   K  + +    
Sbjct: 88  KEADISIKERASLNQLQELRDAAVSSLAEVRQKYKVELAEILDTSESKYKKVSTSINDSN 147

Query: 151 GSHKSDK---------VPEANDNEVMTLHELKQFCKKMDVEGVLRYVTCKRKHFNLYSYY 303
            S  S++           EA+  E      LKQ C++MD +G+L++++   +     S  
Sbjct: 148 ASLASEENTLATGSGEASEASPVETKPRSVLKQLCEQMDTKGLLKFLSVNCRKLATASLR 207

Query: 304 EELSSAIKCAPQPPRLLLNILESLLFPSIPSGSIAKGKDISPNIKFKVCLVLMESVVFRH 483
            ELS A+KCA  P RL+LN LE    P   +   ++   +   ++ K C+VLM+++    
Sbjct: 208 AELSVALKCATDPARLVLNSLEGFFPPEQTNSPGSEHNGL--QVQRKSCIVLMDAIAPAL 265

Query: 484 GRQK-------YYEIKNQAKAIARKWKATLGRVDLNS 573
           G ++         EIK QAKAIA +WK+ L  VDL++
Sbjct: 266 GTKEPGGNDPWSSEIKEQAKAIAEEWKSKLAEVDLDA 302


>ref|XP_002524951.1| Protein FRIGIDA, putative [Ricinus communis]
           gi|223535786|gb|EEF37448.1| Protein FRIGIDA, putative
           [Ricinus communis]
          Length = 570

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 68/208 (32%), Positives = 103/208 (49%), Gaps = 24/208 (11%)
 Frame = +1

Query: 1   REATIADREHTLLDRLQEMKDLSVSALVEARKKRKMAPPMKSGSELGPPRGSHKSDKVPE 180
           REA +A +E    DR+QE+KD +V+ + EAR   +  P M +  + G  + S  S  + +
Sbjct: 82  REAAVAAKEQDFQDRMQELKDAAVAVIAEARANHQ--PIMLASIDGGDNKDSKVSSSLGD 139

Query: 181 ANDNEVMTLH-----------------ELKQFCKKMDVEGVLRYVTCKRKHFNLYSYYEE 309
            N  E  + H                 EL QFC++MD  G+L +    +K  NLY+  EE
Sbjct: 140 TNSPEEDSPHKMGENAESVAVDVKPRPELTQFCEQMDARGLLNFTIENQK--NLYTLREE 197

Query: 310 LSSAIKCAPQPPRLLLNILESLLFPSIPSGSIAKGKDISPNIKFKVCLVLMESVVFRHGR 489
           LS A++   +P RL+L+ LE+  +P + +      KD +   K K C++ ME++     R
Sbjct: 198 LSVALESVSEPARLVLDSLEA-FYPPLETTQPMDKKDAALQGKRKSCIMFMEAMASLLAR 256

Query: 490 -------QKYYEIKNQAKAIARKWKATL 552
                      EIK QAKAIA +WK  L
Sbjct: 257 IDPGADHLLNPEIKQQAKAIADEWKPKL 284


>ref|XP_003550989.1| PREDICTED: protein FRIGIDA-like [Glycine max]
          Length = 607

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 66/217 (30%), Positives = 106/217 (48%), Gaps = 22/217 (10%)
 Frame = +1

Query: 1   REATIADREHTLLDRLQEMKDLSVSALVEARKKRKMA----------PPMKSGSELGPPR 150
           R+A +A +E  LLDRLQE+KD +V+++VEA      A             K  S LG   
Sbjct: 135 RKAVVASKEQDLLDRLQELKDAAVASIVEAHANHWNATLESVYDGKNKDHKVSSSLGDTN 194

Query: 151 GS-----HKSDKVPEANDNEVMTLHELKQFCKKMDVEGVLRYVTCKRKHFNLYSYYEELS 315
            S     HKS +  +    E     EL QFC++MD +G+L Y+   +K  ++    EE+S
Sbjct: 195 SSEDDFPHKSGEKSKGVAVEGRPHPELTQFCEQMDAKGLLNYIMENKKKLSVNC--EEIS 252

Query: 316 SAIKCAPQPPRLLLNILESLLFPSIPSGSIAKGKDISPNIKFKVCLVLMESVVFRHGRQK 495
            A++ A  P RL+L++LE   +P+  +  +      +     K C++++E++     R  
Sbjct: 253 VALQSATNPARLVLDLLEG-FYPTSETSQLKDKSGAALQGMRKSCIIILEAMATLLARAD 311

Query: 496 -------YYEIKNQAKAIARKWKATLGRVDLNSCYVN 585
                    + K QAKAIA +W+  L R D ++   N
Sbjct: 312 PGADHLLNPQTKQQAKAIADEWRPKLARADTDAANGN 348


Top