BLASTX nr result

ID: Dioscorea21_contig00028607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028607
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001051374.1| Os03g0765100 [Oryza sativa Japonica Group] g...    69   3e-10
gb|ABF99038.1| expressed protein [Oryza sativa Japonica Group] g...    69   3e-10
gb|AAP50957.1| hypothetical protein [Oryza sativa Japonica Group...    69   3e-10
ref|XP_002326915.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_003558970.1| PREDICTED: uncharacterized protein LOC100823...    65   6e-09

>ref|NP_001051374.1| Os03g0765100 [Oryza sativa Japonica Group]
           gi|113549845|dbj|BAF13288.1| Os03g0765100, partial
           [Oryza sativa Japonica Group]
          Length = 221

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/77 (41%), Positives = 50/77 (64%)
 Frame = +1

Query: 4   LGSRLAYVEKTLRSFLGSRIFQSRSTKILKIKVMTSTLVKFQFELERDITENDEKWRKVE 183
           + SRL  ++K L+++  ++   S+S + ++ KV +  L+KF+ ELERDITE D  W  + 
Sbjct: 89  ISSRLPRLDKILKTWFSNKTQDSKSMQFIQAKVTSIPLIKFRLELERDITEEDGIWENIS 148

Query: 184 KWKTKPTVERRRFEVVA 234
           KWKT P V+R   +VVA
Sbjct: 149 KWKTVPMVQRVALDVVA 165


>gb|ABF99038.1| expressed protein [Oryza sativa Japonica Group]
           gi|215693006|dbj|BAG88426.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 175

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/77 (41%), Positives = 50/77 (64%)
 Frame = +1

Query: 4   LGSRLAYVEKTLRSFLGSRIFQSRSTKILKIKVMTSTLVKFQFELERDITENDEKWRKVE 183
           + SRL  ++K L+++  ++   S+S + ++ KV +  L+KF+ ELERDITE D  W  + 
Sbjct: 43  ISSRLPRLDKILKTWFSNKTQDSKSMQFIQAKVTSIPLIKFRLELERDITEEDGIWENIS 102

Query: 184 KWKTKPTVERRRFEVVA 234
           KWKT P V+R   +VVA
Sbjct: 103 KWKTVPMVQRVALDVVA 119


>gb|AAP50957.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|218193808|gb|EEC76235.1| hypothetical protein
           OsI_13652 [Oryza sativa Indica Group]
           gi|222625854|gb|EEE59986.1| hypothetical protein
           OsJ_12701 [Oryza sativa Japonica Group]
          Length = 425

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/77 (41%), Positives = 50/77 (64%)
 Frame = +1

Query: 4   LGSRLAYVEKTLRSFLGSRIFQSRSTKILKIKVMTSTLVKFQFELERDITENDEKWRKVE 183
           + SRL  ++K L+++  ++   S+S + ++ KV +  L+KF+ ELERDITE D  W  + 
Sbjct: 293 ISSRLPRLDKILKTWFSNKTQDSKSMQFIQAKVTSIPLIKFRLELERDITEEDGIWENIS 352

Query: 184 KWKTKPTVERRRFEVVA 234
           KWKT P V+R   +VVA
Sbjct: 353 KWKTVPMVQRVALDVVA 369


>ref|XP_002326915.1| predicted protein [Populus trichocarpa] gi|222835230|gb|EEE73665.1|
           predicted protein [Populus trichocarpa]
          Length = 398

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/77 (42%), Positives = 48/77 (62%)
 Frame = +1

Query: 4   LGSRLAYVEKTLRSFLGSRIFQSRSTKILKIKVMTSTLVKFQFELERDITENDEKWRKVE 183
           L S +A +E+ LRSFLG RI ++  +  L+     STL++FQ ELE+    N+       
Sbjct: 268 LSSSIARLEEVLRSFLGDRITRNGLSSFLRATAKASTLIRFQLELEKSFGSNETAQEVFA 327

Query: 184 KWKTKPTVERRRFEVVA 234
           +W+T+PTVER  FEV+A
Sbjct: 328 EWRTRPTVERVWFEVIA 344


>ref|XP_003558970.1| PREDICTED: uncharacterized protein LOC100823712 [Brachypodium
           distachyon]
          Length = 425

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/77 (41%), Positives = 47/77 (61%)
 Frame = +1

Query: 4   LGSRLAYVEKTLRSFLGSRIFQSRSTKILKIKVMTSTLVKFQFELERDITENDEKWRKVE 183
           +  RL  +EK L+++   R   +RS   ++ KV +  LVKF+ ELERDITE D  W  V 
Sbjct: 293 ISPRLPKLEKLLKTWFSKRNEFNRSMNFIEAKVSSIPLVKFRLELERDITEEDGIWEDVP 352

Query: 184 KWKTKPTVERRRFEVVA 234
           +WKT P V+R   +++A
Sbjct: 353 EWKTLPVVQRVMLDIIA 369


Top