BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028596
         (746 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK98741.1|AC090485_20 Hypothetical protein similar to putati...    67   3e-09
ref|NP_189164.1| Ribonuclease H-like protein [Arabidopsis thalia...    65   2e-08
ref|NP_001055806.2| Os05g0469900 [Oryza sativa Japonica Group] g...    61   2e-07
ref|NP_178368.1| RNase H domain-containing protein [Arabidopsis ...    61   2e-07
gb|EEC83863.1| hypothetical protein OsI_29844 [Oryza sativa Indi...    61   3e-07

>gb|AAK98741.1|AC090485_20 Hypothetical protein similar to putative retroelements [Oryza
           sativa Japonica Group] gi|27497213|gb|AAO17357.1|
           Putative retroelement [Oryza sativa Japonica Group]
           gi|108706160|gb|ABF93955.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
           gi|125584905|gb|EAZ25569.1| hypothetical protein
           OsJ_09395 [Oryza sativa Japonica Group]
          Length = 387

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 30/75 (40%), Positives = 37/75 (49%)
 Frame = +2

Query: 389 WDGWSCIWKLLVSPRTKHFIWLLMHNGIKTSEFLYKLNLGPHSYCHLCNLDYETTEHLFY 568
           W  WS IW+    PR K F WL+  N + T   L+K  + P   C LCN + E T H+F 
Sbjct: 223 WPPWSAIWRSAAPPRVKFFAWLMSKNRLPTRVNLHKKTILPTPTCELCNANLEDTYHIFL 282

Query: 569 LCPKAQQLWFAISTI 613
            CP A   W  I  I
Sbjct: 283 RCPMAAAFWNMIQII 297


>ref|NP_189164.1| Ribonuclease H-like protein [Arabidopsis thaliana]
           gi|9294184|dbj|BAB02086.1| reverse transcriptase-like
           protein [Arabidopsis thaliana]
           gi|332643482|gb|AEE77003.1| Ribonuclease H-like protein
           [Arabidopsis thaliana]
          Length = 343

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 27/65 (41%), Positives = 41/65 (63%)
 Frame = +2

Query: 407 IWKLLVSPRTKHFIWLLMHNGIKTSEFLYKLNLGPHSYCHLCNLDYETTEHLFYLCPKAQ 586
           IWKL  +P+ KHF+W L+   + T + L + ++  H  CH C  + ET++HLF+ C  AQ
Sbjct: 18  IWKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLFFDCFYAQ 77

Query: 587 QLWFA 601
           Q+W A
Sbjct: 78  QVWRA 82


>ref|NP_001055806.2| Os05g0469900 [Oryza sativa Japonica Group]
           gi|51038144|gb|AAT93947.1| unknown protein [Oryza sativa
           Japonica Group] gi|215766554|dbj|BAG98862.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|255676435|dbj|BAF17720.2| Os05g0469900 [Oryza sativa
           Japonica Group]
          Length = 144

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 29/77 (37%), Positives = 38/77 (49%)
 Frame = +2

Query: 383 NLWDGWSCIWKLLVSPRTKHFIWLLMHNGIKTSEFLYKLNLGPHSYCHLCNLDYETTEHL 562
           +LW  W  IWK    PR K F WL+  N + T+  L+K +  P   C LCN   E T+H+
Sbjct: 5   HLWPPWEFIWKSSAPPRVKFFGWLMTMNRLPTAVNLHKKSTIPSLTCQLCNTCPEDTDHI 64

Query: 563 FYLCPKAQQLWFAISTI 613
           F   P A   W  I  +
Sbjct: 65  FLAYPLASAFWGLIQVL 81


>ref|NP_178368.1| RNase H domain-containing protein [Arabidopsis thaliana]
           gi|3184275|gb|AAC18922.1| putative reverse transcriptase
           [Arabidopsis thaliana] gi|330250513|gb|AEC05607.1| RNase
           H domain-containing protein [Arabidopsis thaliana]
          Length = 365

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 27/80 (33%), Positives = 41/80 (51%)
 Frame = +2

Query: 407 IWKLLVSPRTKHFIWLLMHNGIKTSEFLYKLNLGPHSYCHLCNLDYETTEHLFYLCPKAQ 586
           IWKL V+P+ KHF+W  +   + T+  L   N+     C  C ++ ET  H+ + CP  Q
Sbjct: 37  IWKLHVAPKIKHFLWRCVTGALATNTRLRSRNIDADPICQRCCIEEETIHHIMFNCPYTQ 96

Query: 587 QLWFAISTIIGRAIQFPDGF 646
            +W + + IIG     P  F
Sbjct: 97  SVWRSANIIIGNQWGPPSSF 116


>gb|EEC83863.1| hypothetical protein OsI_29844 [Oryza sativa Indica Group]
           gi|222640849|gb|EEE68981.1| hypothetical protein
           OsJ_27900 [Oryza sativa Japonica Group]
          Length = 386

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 30/82 (36%), Positives = 41/82 (50%)
 Frame = +2

Query: 386 LWDGWSCIWKLLVSPRTKHFIWLLMHNGIKTSEFLYKLNLGPHSYCHLCNLDYETTEHLF 565
           L   W  IW     PR + F WLL  + + T   L+K N+ P + C +CN   ET  HLF
Sbjct: 222 LCKNWRFIWDNRAPPRVQFFAWLLAKDRLPTKANLHKKNIVPTAGCIVCNCADETATHLF 281

Query: 566 YLCPKAQQLWFAISTIIGRAIQ 631
             C  AQ+ W A+ T +   +Q
Sbjct: 282 LQCQFAQEFWRALRTSVVSNVQ 303