BLASTX nr result

ID: Dioscorea21_contig00028593 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028593
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001105289.1| minichromosome maintenance protein [Zea mays...   219   2e-55
ref|NP_001054989.1| Os05g0235800 [Oryza sativa Japonica Group] g...   218   4e-55
ref|XP_002439489.1| hypothetical protein SORBIDRAFT_09g008010 [S...   217   7e-55
gb|AFW77495.1| hypothetical protein ZEAMMB73_948044 [Zea mays]        216   1e-54
gb|EEC78811.1| hypothetical protein OsI_19080 [Oryza sativa Indi...   216   1e-54

>ref|NP_001105289.1| minichromosome maintenance protein [Zea mays]
           gi|57639342|gb|AAW55593.1| minichromosome maintenance
           protein [Zea mays] gi|413949402|gb|AFW82051.1|
           minichromosome maintenance protein [Zea mays]
          Length = 831

 Score =  219 bits (557), Expect = 2e-55
 Identities = 106/114 (92%), Positives = 110/114 (96%)
 Frame = -1

Query: 350 GGVIKNVEQQYKYTEPIICLNATCSNRTKWALLRQESKFTDWQRVRMQETSKEIPAGSLP 171
           G V+KNVEQQ+KYTEPIIC+NATC NRTKWALLRQESKFTDWQRVRMQETSKEIPAGSLP
Sbjct: 164 GNVVKNVEQQFKYTEPIICVNATCQNRTKWALLRQESKFTDWQRVRMQETSKEIPAGSLP 223

Query: 170 RSLDVILRHEIVEHARAGDTVIFTGTVVAVPDVMALTSPGERAECRREAPQHQN 9
           RSLDVILRHEIVE ARAGDTVIFTGTVVAVPDVMALTSPGERAECRREAPQ +N
Sbjct: 224 RSLDVILRHEIVEKARAGDTVIFTGTVVAVPDVMALTSPGERAECRREAPQRKN 277


>ref|NP_001054989.1| Os05g0235800 [Oryza sativa Japonica Group]
           gi|50300488|gb|AAT73631.1| putative minichromosome
           maintenance protein [Oryza sativa Japonica Group]
           gi|51038190|gb|AAT93993.1| putative minichromosome
           maintenance family protein [Oryza sativa Japonica Group]
           gi|113578540|dbj|BAF16903.1| Os05g0235800 [Oryza sativa
           Japonica Group] gi|222630789|gb|EEE62921.1| hypothetical
           protein OsJ_17726 [Oryza sativa Japonica Group]
          Length = 830

 Score =  218 bits (555), Expect = 4e-55
 Identities = 106/116 (91%), Positives = 111/116 (95%)
 Frame = -1

Query: 350 GGVIKNVEQQYKYTEPIICLNATCSNRTKWALLRQESKFTDWQRVRMQETSKEIPAGSLP 171
           G V+KNVEQQ+KYTEPIIC+NATC NR+KWALLRQESKFTDWQRVRMQETSKEIPAGSLP
Sbjct: 163 GNVVKNVEQQFKYTEPIICVNATCQNRSKWALLRQESKFTDWQRVRMQETSKEIPAGSLP 222

Query: 170 RSLDVILRHEIVEHARAGDTVIFTGTVVAVPDVMALTSPGERAECRREAPQHQNPS 3
           RSLDVILRHEIVE ARAGDTVIFTGTVVAVPDVMALTSPGERAECRREAPQ +N S
Sbjct: 223 RSLDVILRHEIVEKARAGDTVIFTGTVVAVPDVMALTSPGERAECRREAPQRKNGS 278


>ref|XP_002439489.1| hypothetical protein SORBIDRAFT_09g008010 [Sorghum bicolor]
           gi|241944774|gb|EES17919.1| hypothetical protein
           SORBIDRAFT_09g008010 [Sorghum bicolor]
          Length = 831

 Score =  217 bits (553), Expect = 7e-55
 Identities = 105/114 (92%), Positives = 109/114 (95%)
 Frame = -1

Query: 350 GGVIKNVEQQYKYTEPIICLNATCSNRTKWALLRQESKFTDWQRVRMQETSKEIPAGSLP 171
           G V+KNVEQQ+KYTEPIIC+NATC NRTKWALLRQESKFTDWQRVRMQETSKEIPAGSLP
Sbjct: 164 GNVVKNVEQQFKYTEPIICVNATCQNRTKWALLRQESKFTDWQRVRMQETSKEIPAGSLP 223

Query: 170 RSLDVILRHEIVEHARAGDTVIFTGTVVAVPDVMALTSPGERAECRREAPQHQN 9
           RSLDVILRHEIVE ARAGDTVIFTGTVVAVPDVMALTSPGERAECRRE PQ +N
Sbjct: 224 RSLDVILRHEIVEKARAGDTVIFTGTVVAVPDVMALTSPGERAECRREGPQRKN 277


>gb|AFW77495.1| hypothetical protein ZEAMMB73_948044 [Zea mays]
          Length = 709

 Score =  216 bits (551), Expect = 1e-54
 Identities = 105/113 (92%), Positives = 109/113 (96%)
 Frame = -1

Query: 350 GGVIKNVEQQYKYTEPIICLNATCSNRTKWALLRQESKFTDWQRVRMQETSKEIPAGSLP 171
           G V+KNVEQQ+KYTEPIIC+NATC NRTKWALLRQESKFTDWQRVRMQETSKEIPAGSLP
Sbjct: 164 GNVVKNVEQQFKYTEPIICVNATCQNRTKWALLRQESKFTDWQRVRMQETSKEIPAGSLP 223

Query: 170 RSLDVILRHEIVEHARAGDTVIFTGTVVAVPDVMALTSPGERAECRREAPQHQ 12
           RSLDVILRHEIVE ARAGDTVIFTGTVVAVPDVMALTSPGERAECRREAPQ +
Sbjct: 224 RSLDVILRHEIVEKARAGDTVIFTGTVVAVPDVMALTSPGERAECRREAPQRK 276


>gb|EEC78811.1| hypothetical protein OsI_19080 [Oryza sativa Indica Group]
          Length = 830

 Score =  216 bits (551), Expect = 1e-54
 Identities = 105/116 (90%), Positives = 110/116 (94%)
 Frame = -1

Query: 350 GGVIKNVEQQYKYTEPIICLNATCSNRTKWALLRQESKFTDWQRVRMQETSKEIPAGSLP 171
           G V+KNVEQQ+KYTEPIIC+NATC NR+KWALLRQESKFTDWQRVRMQETSKEIPAGSLP
Sbjct: 163 GNVVKNVEQQFKYTEPIICVNATCQNRSKWALLRQESKFTDWQRVRMQETSKEIPAGSLP 222

Query: 170 RSLDVILRHEIVEHARAGDTVIFTGTVVAVPDVMALTSPGERAECRREAPQHQNPS 3
           RSLDVILRHEIVE ARAGDTVIFTGTV AVPDVMALTSPGERAECRREAPQ +N S
Sbjct: 223 RSLDVILRHEIVEKARAGDTVIFTGTVAAVPDVMALTSPGERAECRREAPQRKNGS 278


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