BLASTX nr result

ID: Dioscorea21_contig00028528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028528
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517628.1| small heat-shock protein, putative [Ricinus ...   120   9e-26
ref|XP_002267925.1| PREDICTED: 26.5 kDa heat shock protein, mito...   119   2e-25
ref|XP_002299753.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_002894385.1| hypothetical protein ARALYDRAFT_337408 [Arab...   117   1e-24
ref|XP_003531712.1| PREDICTED: 26.5 kDa heat shock protein, mito...   114   6e-24

>ref|XP_002517628.1| small heat-shock protein, putative [Ricinus communis]
           gi|223543260|gb|EEF44792.1| small heat-shock protein,
           putative [Ricinus communis]
          Length = 236

 Score =  120 bits (302), Expect = 9e-26
 Identities = 61/116 (52%), Positives = 81/116 (69%), Gaps = 2/116 (1%)
 Frame = -2

Query: 344 GFGNVLEHMSGNLNRIFQNL--VPSRILGRLKEDDKHYKLQYEVPGFSKEDLKITIDKGF 171
           G GN L   + N+NR+F+NL   PS ++ RLKE ++ YKL+YEVPG +KEDLKIT+D G 
Sbjct: 104 GLGNALLQATENINRLFENLNLSPSNLMRRLKEKEECYKLRYEVPGVTKEDLKITVDDGV 163

Query: 170 LTISGEHQEEEGDESNHDDHDEEGADGYWHGSRYRFYHTSLMLPADAKVDDIKAEL 3
           LTI GEH+EEE +E + D+H        W    Y +Y+TS++LP DAK D+IKAEL
Sbjct: 164 LTIKGEHKEEEEEEGSDDEH--------WSMRSYGYYNTSVLLPDDAKADEIKAEL 211


>ref|XP_002267925.1| PREDICTED: 26.5 kDa heat shock protein, mitochondrial [Vitis
           vinifera] gi|297743451|emb|CBI36318.3| unnamed protein
           product [Vitis vinifera]
          Length = 233

 Score =  119 bits (299), Expect = 2e-25
 Identities = 56/112 (50%), Positives = 82/112 (73%)
 Frame = -2

Query: 338 GNVLEHMSGNLNRIFQNLVPSRILGRLKEDDKHYKLQYEVPGFSKEDLKITIDKGFLTIS 159
           GN L   + ++NR+ +NL PSR++GRLKE D+ YKL+YE+PG +KED+KI+++ G L+I 
Sbjct: 106 GNALMQATQHMNRLLENLAPSRLIGRLKEQDQCYKLRYEMPGLTKEDVKISVEDGILSIR 165

Query: 158 GEHQEEEGDESNHDDHDEEGADGYWHGSRYRFYHTSLMLPADAKVDDIKAEL 3
           GEH+EEE +E + D+H        W  + Y +Y TSL+LP DAK+++IKAEL
Sbjct: 166 GEHKEEE-EEGSDDEH--------WSATSYGYYDTSLLLPTDAKIEEIKAEL 208


>ref|XP_002299753.1| predicted protein [Populus trichocarpa] gi|222847011|gb|EEE84558.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score =  119 bits (297), Expect = 3e-25
 Identities = 65/118 (55%), Positives = 80/118 (67%), Gaps = 4/118 (3%)
 Frame = -2

Query: 344 GFGNVLEHMSGNLNRIFQNL---VPSRILGRLKEDDKHYKLQYEVPGFSKEDLKITIDKG 174
           G GN L   + N+N++FQNL    PS ++GR+KE D+ YKL+YEVPG SKEDLKI ID G
Sbjct: 111 GLGNALVQATDNINKLFQNLHIPAPSNLIGRVKEKDECYKLRYEVPGVSKEDLKIAIDDG 170

Query: 173 FLTISGEHQEEEGDESNHDDHDEEGADG-YWHGSRYRFYHTSLMLPADAKVDDIKAEL 3
            LTI GE +EEE          EEG+DG +W    Y  Y+TS+MLP DAK D+IKAEL
Sbjct: 171 VLTIKGELKEEE----------EEGSDGEHWSMRSYGCYNTSIMLPDDAKTDEIKAEL 218


>ref|XP_002894385.1| hypothetical protein ARALYDRAFT_337408 [Arabidopsis lyrata subsp.
           lyrata] gi|297340227|gb|EFH70644.1| hypothetical protein
           ARALYDRAFT_337408 [Arabidopsis lyrata subsp. lyrata]
          Length = 232

 Score =  117 bits (293), Expect = 1e-24
 Identities = 60/114 (52%), Positives = 77/114 (67%), Gaps = 2/114 (1%)
 Frame = -2

Query: 338 GNVLEHMSGNLNRIFQN--LVPSRILGRLKEDDKHYKLQYEVPGFSKEDLKITIDKGFLT 165
           GN L   + N+NRIF N  + PS+++G++KE D  YKL+YEVPG +K+D+KIT+D G LT
Sbjct: 101 GNALMQATENINRIFDNFNIRPSQLMGQVKEQDDCYKLRYEVPGLTKDDVKITVDDGILT 160

Query: 164 ISGEHQEEEGDESNHDDHDEEGADGYWHGSRYRFYHTSLMLPADAKVDDIKAEL 3
           I GEH+ EE   S  +D        YW    Y +Y+TSL LP DAKVDDIKAEL
Sbjct: 161 IKGEHKAEEEKGSPEEDE-------YWSSKSYGYYNTSLSLPDDAKVDDIKAEL 207


>ref|XP_003531712.1| PREDICTED: 26.5 kDa heat shock protein, mitochondrial-like [Glycine
           max]
          Length = 225

 Score =  114 bits (286), Expect = 6e-24
 Identities = 63/118 (53%), Positives = 79/118 (66%), Gaps = 4/118 (3%)
 Frame = -2

Query: 344 GFGNVLEHMSGNLNRIFQN--LVP-SRILGRLKEDDKHYKLQYEVPGFSKEDLKITI-DK 177
           G G+ L   S N+NR+F+N  L P S   GR+KE D HYKL+YE+PG +KED+KITI D 
Sbjct: 94  GLGSALMQASNNINRLFENMNLTPWSLTSGRVKEKDDHYKLRYEMPGIAKEDVKITIDDD 153

Query: 176 GFLTISGEHQEEEGDESNHDDHDEEGADGYWHGSRYRFYHTSLMLPADAKVDDIKAEL 3
           G LTI GEH+EE+ D+           + YW  S Y +Y+TSL+LP DAK DDIKAEL
Sbjct: 154 GVLTIKGEHKEEKDDD-----------EQYWSSSSYGYYNTSLILPDDAKADDIKAEL 200


Top