BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028524
         (1253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268109.1| PREDICTED: pentatricopeptide repeat-containi...   335   7e-90
ref|XP_002321108.1| predicted protein [Populus trichocarpa] gi|2...   327   5e-87
ref|XP_002516403.1| pentatricopeptide repeat-containing protein,...   326   9e-87
ref|XP_003552730.1| PREDICTED: pentatricopeptide repeat-containi...   318   2e-84
ref|XP_003538531.1| PREDICTED: pentatricopeptide repeat-containi...   310   4e-82

>ref|XP_002268109.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14190,
            chloroplastic-like [Vitis vinifera]
          Length = 581

 Score =  335 bits (859), Expect(2) = 7e-90
 Identities = 165/312 (52%), Positives = 224/312 (71%), Gaps = 6/312 (1%)
 Frame = +2

Query: 44   FLKKVVDAGLQPMAETYHGIIRAYGTCGMYDELSKCVKQMESVGCSPNEVTYNILIVEFA 223
            FL ++    L    ETY G+I++YG   MYDEL +CVK+MES GC P+ +TYN+LI EF+
Sbjct: 222  FLNELKANNLIADTETYDGLIQSYGKYKMYDELDECVKKMESDGCLPDHITYNLLIQEFS 281

Query: 224  QGGLVDTMEGVYRTVLSKRMNLQPSTLVAMLEAYANLGIVEKMEKVYRMVMKTNAYIKDT 403
            +GGL+  ME V++TVLSK+M LQ STLV MLEAYAN GI+EKME  YR V+ +   +KD 
Sbjct: 282  RGGLLKRMERVFQTVLSKKMGLQSSTLVVMLEAYANFGIIEKMENAYRRVLNSKTSLKDD 341

Query: 404  VVRKLAAVYIENYRFARLEELGNDISARTGRTDLVWCILLLASACFLSRKGIESIIREMK 583
            ++RKLA VYIENY+F+RL ++G ++++ T RTDLVWC+ LL+ AC LSRKG++SI++EM+
Sbjct: 342  LIRKLAEVYIENYKFSRLADMGLNLASVTSRTDLVWCLRLLSHACLLSRKGLDSIVKEME 401

Query: 584  VAKVEFKVTFVNILALFLLKVKDFSKLDAVLSQTGKHNRKPDIITVGILFDACRIGYDGT 763
               V +  T  N + L  LK+KDF++L  +L +    + KPDI+TVGILFDA RIG++GT
Sbjct: 402  AKNVPWNATVANTILLAYLKMKDFTRLRILLLELSTRHVKPDIVTVGILFDANRIGFNGT 461

Query: 764  RILEIWRRSGFLETEAEMRTDPLVLNTFGKGLFMRDCERIFSSAGSNLKEKKHWTYHSLI 943
              L  WRR+GFL+   EM TDPLVL+ FGKG F++ CE ++SS     ++KK WTY +LI
Sbjct: 462  MALNTWRRTGFLDEAVEMNTDPLVLSAFGKGNFLQSCEEMYSSLEPEARKKKIWTYQNLI 521

Query: 944  ------SLVFGK 961
                   L+FGK
Sbjct: 522  DLDGLLGLLFGK 533



 Score = 23.5 bits (49), Expect(2) = 7e-90
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +1

Query: 1   HGFARKKEFDNSACFFKE 54
           H FARK EFD +  F  E
Sbjct: 208 HCFARKGEFDRALYFLNE 225


>ref|XP_002321108.1| predicted protein [Populus trichocarpa] gi|222861881|gb|EEE99423.1|
            predicted protein [Populus trichocarpa]
          Length = 419

 Score =  327 bits (837), Expect = 5e-87
 Identities = 158/303 (52%), Positives = 218/303 (71%)
 Frame = +2

Query: 44   FLKKVVDAGLQPMAETYHGIIRAYGTCGMYDELSKCVKQMESVGCSPNEVTYNILIVEFA 223
            +L ++ +  L P ++TY G+I AYGT  MYDE++ C+K+ME  GCSP+  TYN+LI +FA
Sbjct: 117  YLNQMNEMNLSPESDTYDGLIEAYGTYRMYDEMAMCLKKMELDGCSPDRYTYNLLIQKFA 176

Query: 224  QGGLVDTMEGVYRTVLSKRMNLQPSTLVAMLEAYANLGIVEKMEKVYRMVMKTNAYIKDT 403
            QGGL+  ME VY+++ +KRM LQ STL++MLEAYAN GIVEKMEK+ R    +   +K+ 
Sbjct: 177  QGGLLTRMERVYQSMRTKRMKLQSSTLISMLEAYANFGIVEKMEKILRWAWNSKITVKED 236

Query: 404  VVRKLAAVYIENYRFARLEELGNDISARTGRTDLVWCILLLASACFLSRKGIESIIREMK 583
            +VRKLA VYI NY F+RL +L  D+++ TGRTD+VWC+ LL+ AC LSR+G+++++REM+
Sbjct: 237  LVRKLAGVYIANYMFSRLHDLAVDLTSITGRTDIVWCLHLLSHACLLSRRGMDAVVREME 296

Query: 584  VAKVEFKVTFVNILALFLLKVKDFSKLDAVLSQTGKHNRKPDIITVGILFDACRIGYDGT 763
             AK  + +T  NI+ L  LK+KDF++L  +LS+  +   +PDI+T GILFDA  IG+DG 
Sbjct: 297  DAKACWNITVANIILLAYLKMKDFTRLRILLSKLPEIRVEPDIVTFGILFDAEEIGFDGK 356

Query: 764  RILEIWRRSGFLETEAEMRTDPLVLNTFGKGLFMRDCERIFSSAGSNLKEKKHWTYHSLI 943
              LE+WR+ G L    EM TDPL L+ FGKG F+R CE  +SS   N +EKK WTY   I
Sbjct: 357  ECLEMWRKMGLLYRRVEMNTDPLALSAFGKGSFLRSCEEGYSSLEPNAREKKRWTYVDFI 416

Query: 944  SLV 952
            +LV
Sbjct: 417  NLV 419


>ref|XP_002516403.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223544501|gb|EEF46020.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 502

 Score =  326 bits (835), Expect = 9e-87
 Identities = 157/303 (51%), Positives = 219/303 (72%)
 Frame = +2

Query: 44   FLKKVVDAGLQPMAETYHGIIRAYGTCGMYDELSKCVKQMESVGCSPNEVTYNILIVEFA 223
            +L  + +  L P+++TY+G+I+AYG   MYDE+  C+K+ME  GCSP+ VTYN+LI E A
Sbjct: 190  YLNHLKEINLSPVSDTYNGLIQAYGKYKMYDEMGMCLKKMEMEGCSPDHVTYNLLIQELA 249

Query: 224  QGGLVDTMEGVYRTVLSKRMNLQPSTLVAMLEAYANLGIVEKMEKVYRMVMKTNAYIKDT 403
            + GL+  ME VY+T    RM+L+ +TL AMLEAYAN GIVEKME + +    + A +K+ 
Sbjct: 250  EAGLLTRMEKVYQTTRMNRMDLKSTTLTAMLEAYANFGIVEKMELILKRTRNSKALLKED 309

Query: 404  VVRKLAAVYIENYRFARLEELGNDISARTGRTDLVWCILLLASACFLSRKGIESIIREMK 583
            +++K+A VYIEN+ F+RLE+LG+ +S R+G+ D+VWC+LLL++AC LS+KG++S++REMK
Sbjct: 310  LIKKIALVYIENFMFSRLEKLGHYLSKRSGQNDMVWCLLLLSNACMLSQKGMDSVVREMK 369

Query: 584  VAKVEFKVTFVNILALFLLKVKDFSKLDAVLSQTGKHNRKPDIITVGILFDACRIGYDGT 763
            VAKV + VTF+NI+ L  LK+KD  +L  +LS    H  KPDI+TVG+LFDA  IG+ G 
Sbjct: 370  VAKVSWNVTFINIILLAYLKMKDSMRLGILLSTLTNHIVKPDIVTVGVLFDANNIGFHGN 429

Query: 764  RILEIWRRSGFLETEAEMRTDPLVLNTFGKGLFMRDCERIFSSAGSNLKEKKHWTYHSLI 943
             ILE WRR+G L    E  TDPLVL  FGKG F++ CE  +SS     ++K+ WTY +LI
Sbjct: 430  GILETWRRTGILYRCVETETDPLVLAAFGKGQFLKKCEEAYSSLEPVARQKEKWTYCNLI 489

Query: 944  SLV 952
             LV
Sbjct: 490  DLV 492


>ref|XP_003552730.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14190,
            chloroplastic-like [Glycine max]
          Length = 509

 Score =  318 bits (815), Expect = 2e-84
 Identities = 152/303 (50%), Positives = 220/303 (72%)
 Frame = +2

Query: 44   FLKKVVDAGLQPMAETYHGIIRAYGTCGMYDELSKCVKQMESVGCSPNEVTYNILIVEFA 223
            F+ ++ ++GL+  +ETY G++ AYG   MYDE+ +CVK+ME  GCSP+ +TYNILI E+A
Sbjct: 194  FIDEMKESGLELDSETYDGLLGAYGKFQMYDEMGECVKKMELEGCSPDHITYNILIQEYA 253

Query: 224  QGGLVDTMEGVYRTVLSKRMNLQPSTLVAMLEAYANLGIVEKMEKVYRMVMKTNAYIKDT 403
            + GL+  ME +Y+ ++SKRM++Q STLVAMLEAY   G+VEKME  YR ++ +   ++D 
Sbjct: 254  RAGLLQRMEKLYQRMVSKRMHVQSSTLVAMLEAYTTFGMVEKMENFYRKILSSKTCLEDD 313

Query: 404  VVRKLAAVYIENYRFARLEELGNDISARTGRTDLVWCILLLASACFLSRKGIESIIREMK 583
            ++RK+A VYI+NY F+RLE+L  D+    G ++LVWC+ LL+ AC LS+KG++ ++REM+
Sbjct: 314  LIRKVAEVYIKNYMFSRLEDLALDLCPAFGESNLVWCLRLLSYACPLSKKGMDIVVREMR 373

Query: 584  VAKVEFKVTFVNILALFLLKVKDFSKLDAVLSQTGKHNRKPDIITVGILFDACRIGYDGT 763
             AKV + VT  NI+ L  +K+KDF  L  +LSQ   +  +PDIIT+GILFDA RIG+DG+
Sbjct: 374  DAKVNWNVTVANIIMLAYVKMKDFRHLKILLSQLPIYRVQPDIITIGILFDATRIGFDGS 433

Query: 764  RILEIWRRSGFLETEAEMRTDPLVLNTFGKGLFMRDCERIFSSAGSNLKEKKHWTYHSLI 943
              LE WRR G+L    E++TD LVL  FGKG F++ CE ++SS     +++K WTYH LI
Sbjct: 434  GALETWRRMGYLYRVVEIKTDSLVLTAFGKGHFLKSCEEVYSSLHPEDRKRKTWTYHDLI 493

Query: 944  SLV 952
            +L+
Sbjct: 494  ALL 496


>ref|XP_003538531.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14190,
            chloroplastic-like [Glycine max]
          Length = 506

 Score =  310 bits (795), Expect = 4e-82
 Identities = 152/303 (50%), Positives = 216/303 (71%)
 Frame = +2

Query: 44   FLKKVVDAGLQPMAETYHGIIRAYGTCGMYDELSKCVKQMESVGCSPNEVTYNILIVEFA 223
            F+ ++ ++GL+  +ETY G+I AYG   MYDE+ +CVK+ME  GCSP+ +TYNILI E+A
Sbjct: 192  FIDEMKESGLELDSETYDGLIGAYGKFQMYDEMGECVKKMELEGCSPDPITYNILIQEYA 251

Query: 224  QGGLVDTMEGVYRTVLSKRMNLQPSTLVAMLEAYANLGIVEKMEKVYRMVMKTNAYIKDT 403
             GGL+  ME +Y+ +LSKRM+++ STLVAMLEAY   G+VEKMEK YR ++ +   I+D 
Sbjct: 252  GGGLLQRMEKLYQRMLSKRMHVKSSTLVAMLEAYTTFGMVEKMEKFYRKILNSKTCIEDD 311

Query: 404  VVRKLAAVYIENYRFARLEELGNDISARTGRTDLVWCILLLASACFLSRKGIESIIREMK 583
            ++RK+A VYI N+ F+RLE+L  D+    G ++L WC  LL+ AC LS+KG++ +++EM+
Sbjct: 312  LIRKVAEVYINNFMFSRLEDLALDLCPAFGESNLEWCFRLLSYACLLSKKGMDIVVQEMQ 371

Query: 584  VAKVEFKVTFVNILALFLLKVKDFSKLDAVLSQTGKHNRKPDIITVGILFDACRIGYDGT 763
             AKV + VT  NI+ L  +K+K+F  L  +LSQ   +  +PDIIT+GILFDA RIG+DG+
Sbjct: 372  DAKVSWNVTVANIIMLAYVKMKEFRHLRILLSQLPIYRVQPDIITIGILFDATRIGFDGS 431

Query: 764  RILEIWRRSGFLETEAEMRTDPLVLNTFGKGLFMRDCERIFSSAGSNLKEKKHWTYHSLI 943
              LE WRR G+L    EM+TD LVL  FGKG F++ CE ++SS     +++K  TYH LI
Sbjct: 432  GALETWRRMGYLYRVVEMKTDSLVLTAFGKGHFLKSCEEVYSSLHPEDRKRKTCTYHDLI 491

Query: 944  SLV 952
             L+
Sbjct: 492  PLL 494