BLASTX nr result
ID: Dioscorea21_contig00028463
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00028463
(347 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002530092.1| pentatricopeptide repeat-containing protein,... 166 2e-39
emb|CBI19924.3| unnamed protein product [Vitis vinifera] 165 4e-39
ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containi... 165 4e-39
ref|XP_002302207.1| predicted protein [Populus trichocarpa] gi|2... 164 9e-39
ref|XP_003522563.1| PREDICTED: pentatricopeptide repeat-containi... 158 4e-37
>ref|XP_002530092.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223530403|gb|EEF32291.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 718
Score = 166 bits (419), Expect = 2e-39
Identities = 74/114 (64%), Positives = 97/114 (85%)
Frame = -1
Query: 347 VSGYALCGRFAEAEKLFDDMPERNVVSWNAMLAGYVRCLCWDKALDFIFLMAKESEEMDN 168
VS YAL GR EA +LF+ MPE +VVSWNAMLAGY+R L W++ALDF+ LM + +E++D+
Sbjct: 332 VSAYALSGRTREARELFEKMPEWSVVSWNAMLAGYIRSLQWEEALDFVCLMRRTTEDIDH 391
Query: 167 VSLKLILNVCAGVSDLELGKQVHGFVFRHGFCSNLFIGNALVDMYGKCGNLRSA 6
++L L+LNVCAG+SD+E+GKQ HGF++RHGF S + +GNAL+DMYGKCGNLRSA
Sbjct: 392 ITLGLLLNVCAGISDVEMGKQAHGFIYRHGFSSCILVGNALLDMYGKCGNLRSA 445
Score = 95.9 bits (237), Expect = 3e-18
Identities = 43/108 (39%), Positives = 66/108 (61%)
Frame = -1
Query: 347 VSGYALCGRFAEAEKLFDDMPERNVVSWNAMLAGYVRCLCWDKALDFIFLMAKESEEMDN 168
+ Y C +A +LFD+MP+R+ SWNA++ Y +C +KAL M KE +
Sbjct: 99 IETYGKCECLKDARELFDEMPQRDGGSWNAIIKAYTQCGYAEKALGLFKDMNKEGVFANE 158
Query: 167 VSLKLILNVCAGVSDLELGKQVHGFVFRHGFCSNLFIGNALVDMYGKC 24
++ +L C+ V DL L +Q+HG + + GFC N+ +G+ALVD+YGKC
Sbjct: 159 ITFASVLKSCSDVLDLSLSRQIHGLIVKCGFCGNVILGSALVDVYGKC 206
Score = 66.2 bits (160), Expect = 3e-09
Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Frame = -1
Query: 338 YALCGRFAEAEKLFDDMPE-RNVVSWNAMLAGYVRCLCWDKALDFIFLMAKESEEMDNVS 162
Y CG A F M + R+ +SWNA+L Y R ++A+ IF + + +
Sbjct: 436 YGKCGNLRSARVWFYQMSQSRDNISWNALLTSYARHHQSEQAM-MIFGEMQWETKPSTFT 494
Query: 161 LKLILNVCAGVSDLELGKQVHGFVFRHGFCSNLFIGNALVDMYGKC 24
+L CA + L+ GK++HGF+ R+G+ + I ALVDMY KC
Sbjct: 495 FGTLLAACANIFALDQGKEIHGFMIRNGYNLDTVISGALVDMYSKC 540
Score = 55.8 bits (133), Expect = 4e-06
Identities = 32/114 (28%), Positives = 54/114 (47%)
Frame = -1
Query: 347 VSGYALCGRFAEAEKLFDDMPERNVVSWNAMLAGYVRCLCWDKALDFIFLMAKESEEMDN 168
V Y C +EA +F+++ N V+WN ++ Y+ +A+ F M + N
Sbjct: 200 VDVYGKCKVMSEARLMFNEIENCNDVTWNVIVRRYLDVGNEREAVKMFFKMFQTDVRPLN 259
Query: 167 VSLKLILNVCAGVSDLELGKQVHGFVFRHGFCSNLFIGNALVDMYGKCGNLRSA 6
+ L C+ + L G Q+H F + F + + ++L +MY KCG L SA
Sbjct: 260 FTFSNALIACSAMRALNEGMQIHAFAIKIKFEEDEAVSSSLSNMYAKCGKLESA 313
>emb|CBI19924.3| unnamed protein product [Vitis vinifera]
Length = 912
Score = 165 bits (417), Expect = 4e-39
Identities = 74/113 (65%), Positives = 96/113 (84%)
Frame = -1
Query: 347 VSGYALCGRFAEAEKLFDDMPERNVVSWNAMLAGYVRCLCWDKALDFIFLMAKESEEMDN 168
VSGYA+ G+ EA LFD+MPER+V+SWNAMLAGY W++AL+F+FLM K ++++D+
Sbjct: 335 VSGYAMSGQTREARVLFDEMPERSVISWNAMLAGYTHFCQWEEALEFVFLMRKATQDIDH 394
Query: 167 VSLKLILNVCAGVSDLELGKQVHGFVFRHGFCSNLFIGNALVDMYGKCGNLRS 9
V++ LILNVCAG+SD+E GKQVHGF++RHG SNLF+GNAL+ MYGKCGNLRS
Sbjct: 395 VTVGLILNVCAGLSDVESGKQVHGFIYRHGLYSNLFVGNALLHMYGKCGNLRS 447
Score = 89.0 bits (219), Expect = 4e-16
Identities = 41/108 (37%), Positives = 65/108 (60%)
Frame = -1
Query: 347 VSGYALCGRFAEAEKLFDDMPERNVVSWNAMLAGYVRCLCWDKALDFIFLMAKESEEMDN 168
+ Y C +A +LF++MP+R+ SWNAM+ Y + C +KAL M + +
Sbjct: 102 IETYGKCSCLDDARELFEEMPQRDGGSWNAMITAYAQGGCAEKALWLFSRMNRLGIWANE 161
Query: 167 VSLKLILNVCAGVSDLELGKQVHGFVFRHGFCSNLFIGNALVDMYGKC 24
++ +L CA V L L KQ+HG + ++GFC N+ +G++LVD+YGKC
Sbjct: 162 ITFASVLGSCATVLALFLSKQIHGLIVKYGFCWNVILGSSLVDIYGKC 209
Score = 71.6 bits (174), Expect = 6e-11
Identities = 34/111 (30%), Positives = 60/111 (54%)
Frame = -1
Query: 338 YALCGRFAEAEKLFDDMPERNVVSWNAMLAGYVRCLCWDKALDFIFLMAKESEEMDNVSL 159
Y C ++A ++FD++ N +SWN ++ Y+ +A+ F M + + N +
Sbjct: 206 YGKCRVMSDARRMFDEIENPNAISWNVIVRRYLEMGNEKEAVVMFFKMIRANIRPLNFTF 265
Query: 158 KLILNVCAGVSDLELGKQVHGFVFRHGFCSNLFIGNALVDMYGKCGNLRSA 6
L C+ +S L+ G Q+HG R G+ + + ++L+DMY KCG+L SA
Sbjct: 266 SNALIACSSISALQEGIQIHGVAIRIGYDEDEVVSSSLIDMYAKCGDLESA 316
Score = 65.1 bits (157), Expect = 6e-09
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Frame = -1
Query: 338 YALCGRFAEAEKLFDDMPE-RNVVSWNAMLAGYVRCLCWDKALDFIFLMAKESEEMDNVS 162
Y CG F M R+ +SWNA+L + R ++A+ M E+ +
Sbjct: 439 YGKCGNLRSTRLWFYQMSHWRDRISWNALLTSHARHGLSEEAMTIFGEMQWETTP-SKFT 497
Query: 161 LKLILNVCAGVSDLELGKQVHGFVFRHGFCSNLFIGNALVDMYGKCGNLRSA 6
L +L+ CA + LE GKQ+HGF+ R+G+ ++ ALVDMY KC L A
Sbjct: 498 LGTLLSACANIFALEQGKQIHGFMIRNGYEIDVVARGALVDMYSKCRCLEYA 549
>ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26540
[Vitis vinifera]
Length = 711
Score = 165 bits (417), Expect = 4e-39
Identities = 74/113 (65%), Positives = 96/113 (84%)
Frame = -1
Query: 347 VSGYALCGRFAEAEKLFDDMPERNVVSWNAMLAGYVRCLCWDKALDFIFLMAKESEEMDN 168
VSGYA+ G+ EA LFD+MPER+V+SWNAMLAGY W++AL+F+FLM K ++++D+
Sbjct: 335 VSGYAMSGQTREARVLFDEMPERSVISWNAMLAGYTHFCQWEEALEFVFLMRKATQDIDH 394
Query: 167 VSLKLILNVCAGVSDLELGKQVHGFVFRHGFCSNLFIGNALVDMYGKCGNLRS 9
V++ LILNVCAG+SD+E GKQVHGF++RHG SNLF+GNAL+ MYGKCGNLRS
Sbjct: 395 VTVGLILNVCAGLSDVESGKQVHGFIYRHGLYSNLFVGNALLHMYGKCGNLRS 447
Score = 89.0 bits (219), Expect = 4e-16
Identities = 41/108 (37%), Positives = 65/108 (60%)
Frame = -1
Query: 347 VSGYALCGRFAEAEKLFDDMPERNVVSWNAMLAGYVRCLCWDKALDFIFLMAKESEEMDN 168
+ Y C +A +LF++MP+R+ SWNAM+ Y + C +KAL M + +
Sbjct: 102 IETYGKCSCLDDARELFEEMPQRDGGSWNAMITAYAQGGCAEKALWLFSRMNRLGIWANE 161
Query: 167 VSLKLILNVCAGVSDLELGKQVHGFVFRHGFCSNLFIGNALVDMYGKC 24
++ +L CA V L L KQ+HG + ++GFC N+ +G++LVD+YGKC
Sbjct: 162 ITFASVLGSCATVLALFLSKQIHGLIVKYGFCWNVILGSSLVDIYGKC 209
Score = 71.6 bits (174), Expect = 6e-11
Identities = 34/111 (30%), Positives = 60/111 (54%)
Frame = -1
Query: 338 YALCGRFAEAEKLFDDMPERNVVSWNAMLAGYVRCLCWDKALDFIFLMAKESEEMDNVSL 159
Y C ++A ++FD++ N +SWN ++ Y+ +A+ F M + + N +
Sbjct: 206 YGKCRVMSDARRMFDEIENPNAISWNVIVRRYLEMGNEKEAVVMFFKMIRANIRPLNFTF 265
Query: 158 KLILNVCAGVSDLELGKQVHGFVFRHGFCSNLFIGNALVDMYGKCGNLRSA 6
L C+ +S L+ G Q+HG R G+ + + ++L+DMY KCG+L SA
Sbjct: 266 SNALIACSSISALQEGIQIHGVAIRIGYDEDEVVSSSLIDMYAKCGDLESA 316
Score = 65.1 bits (157), Expect = 6e-09
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Frame = -1
Query: 338 YALCGRFAEAEKLFDDMPE-RNVVSWNAMLAGYVRCLCWDKALDFIFLMAKESEEMDNVS 162
Y CG F M R+ +SWNA+L + R ++A+ M E+ +
Sbjct: 439 YGKCGNLRSTRLWFYQMSHWRDRISWNALLTSHARHGLSEEAMTIFGEMQWETTP-SKFT 497
Query: 161 LKLILNVCAGVSDLELGKQVHGFVFRHGFCSNLFIGNALVDMYGKCGNLRSA 6
L +L+ CA + LE GKQ+HGF+ R+G+ ++ ALVDMY KC L A
Sbjct: 498 LGTLLSACANIFALEQGKQIHGFMIRNGYEIDVVARGALVDMYSKCRCLEYA 549
>ref|XP_002302207.1| predicted protein [Populus trichocarpa] gi|222843933|gb|EEE81480.1|
predicted protein [Populus trichocarpa]
Length = 709
Score = 164 bits (414), Expect = 9e-39
Identities = 71/114 (62%), Positives = 99/114 (86%)
Frame = -1
Query: 347 VSGYALCGRFAEAEKLFDDMPERNVVSWNAMLAGYVRCLCWDKALDFIFLMAKESEEMDN 168
VS YA+ GR EA +LFD+MPERN+VS+NA+LAGY+R L W++ALDF++LM + +E +D+
Sbjct: 332 VSAYAMSGRMREARELFDEMPERNMVSYNALLAGYIRSLQWEEALDFVYLMCRTTENIDH 391
Query: 167 VSLKLILNVCAGVSDLELGKQVHGFVFRHGFCSNLFIGNALVDMYGKCGNLRSA 6
++ +L+LNVC+G+SD+++GKQVHGF++RHG+ SN IGNAL+DMY KCGNLRSA
Sbjct: 392 ITFQLMLNVCSGLSDVDMGKQVHGFIYRHGWLSNTVIGNALLDMYCKCGNLRSA 445
Score = 96.7 bits (239), Expect = 2e-18
Identities = 42/109 (38%), Positives = 69/109 (63%)
Frame = -1
Query: 347 VSGYALCGRFAEAEKLFDDMPERNVVSWNAMLAGYVRCLCWDKALDFIFLMAKESEEMDN 168
+ Y C +A++LFD+MP+R+ SWNAM+ ++C+ +KAL + M K+ +
Sbjct: 99 IDTYGKCRCLEDAKELFDEMPQRDGGSWNAMIRACLQCVRPEKALSYFGDMHKQGVYANE 158
Query: 167 VSLKLILNVCAGVSDLELGKQVHGFVFRHGFCSNLFIGNALVDMYGKCG 21
V+ L C V +L L +Q+HG + ++GFC N+ +G++LVD+YGKCG
Sbjct: 159 VTFSSALRACGDVLELCLSRQIHGLIVKYGFCGNVIVGSSLVDVYGKCG 207
Score = 65.9 bits (159), Expect = 3e-09
Identities = 40/112 (35%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Frame = -1
Query: 338 YALCGRFAEAEKLFDDMPE-RNVVSWNAMLAGYVRCLCWDKALDFIFLMAKESEEMDNVS 162
Y CG A F M + R+ VSWN +L Y R ++A+ M E++ +
Sbjct: 436 YCKCGNLRSAGVWFHQMKQSRDSVSWNVLLTSYARRQMSEQAMSIFREMQWETKPHKFIF 495
Query: 161 LKLILNVCAGVSDLELGKQVHGFVFRHGFCSNLFIGNALVDMYGKCGNLRSA 6
L L CA L+ GKQ+HGF+ R+G+ + I AL+DMY KC L A
Sbjct: 496 ATL-LAACANTFALDQGKQIHGFMIRNGYDIDTVIAGALLDMYSKCRCLEYA 546
Score = 60.1 bits (144), Expect = 2e-07
Identities = 31/114 (27%), Positives = 58/114 (50%)
Frame = -1
Query: 347 VSGYALCGRFAEAEKLFDDMPERNVVSWNAMLAGYVRCLCWDKALDFIFLMAKESEEMDN 168
V Y CG +E+ ++FD++ N V+WN ++ Y+ ++A+ F M + +
Sbjct: 200 VDVYGKCGAMSESRRIFDEIENPNNVTWNIIVRRYLEVGDENEAVVMFFKMFRAKLRPLS 259
Query: 167 VSLKLILNVCAGVSDLELGKQVHGFVFRHGFCSNLFIGNALVDMYGKCGNLRSA 6
+ L C+ + ++ G Q+HG + F + ++L+DMY KCG + SA
Sbjct: 260 YTFSNALVACSDMRAVKEGMQIHGVATKINFEEEEVVLSSLIDMYVKCGEIESA 313
>ref|XP_003522563.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g26540-like [Glycine max]
Length = 698
Score = 158 bits (400), Expect = 4e-37
Identities = 71/113 (62%), Positives = 93/113 (82%)
Frame = -1
Query: 347 VSGYALCGRFAEAEKLFDDMPERNVVSWNAMLAGYVRCLCWDKALDFIFLMAKESEEMDN 168
VSGYA+ G+ EA + FD+MPERNV+SWNAMLAGY +C W KALDF++LM +++D+
Sbjct: 338 VSGYAMSGKTLEAREFFDEMPERNVISWNAMLAGYTQCSEWSKALDFVYLMLDVIKDVDH 397
Query: 167 VSLKLILNVCAGVSDLELGKQVHGFVFRHGFCSNLFIGNALVDMYGKCGNLRS 9
V+L L+LNV AG+SD E+GKQVHG+++RHGF S+L + NAL+DMYGKCGNL S
Sbjct: 398 VTLGLLLNVSAGISDHEMGKQVHGYIYRHGFHSDLRLSNALLDMYGKCGNLNS 450
Score = 87.8 bits (216), Expect = 8e-16
Identities = 42/114 (36%), Positives = 64/114 (56%)
Frame = -1
Query: 347 VSGYALCGRFAEAEKLFDDMPERNVVSWNAMLAGYVRCLCWDKALDFIFLMAKESEEMDN 168
+ YA C +A +LFD+MP+ + SWNA++ Y + ++ M +
Sbjct: 104 IEAYAKCHCLRDARELFDEMPQPDGGSWNALITAYSQLGFPNETFSLFLCMTRSGFFPTE 163
Query: 167 VSLKLILNVCAGVSDLELGKQVHGFVFRHGFCSNLFIGNALVDMYGKCGNLRSA 6
V+ +L CA S+L L KQVHG V + GFC N+ +G++LVD+YGKCG + A
Sbjct: 164 VTFASVLASCAASSELLLSKQVHGLVTKFGFCGNVILGSSLVDVYGKCGVMADA 217
Score = 67.0 bits (162), Expect = 2e-09
Identities = 43/112 (38%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Frame = -1
Query: 338 YALCGRFAEAEKLFDDMPER-NVVSWNAMLAGYVRCLCWDKALDFIFLMAKESEEMDNVS 162
Y CG F+ M +R + VSWNA+LA Y + ++AL M E++
Sbjct: 442 YGKCGNLNSTRVWFNQMSDRRDRVSWNALLASYGQHQLSEQALTMFSKMQWETKPTQYTF 501
Query: 161 LKLILNVCAGVSDLELGKQVHGFVFRHGFCSNLFIGNALVDMYGKCGNLRSA 6
+ L+L CA L LGKQ+HGF+ RHGF + ALV MY KC L A
Sbjct: 502 VTLLL-ACANTFTLCLGKQIHGFMIRHGFHIDTVTRTALVYMYCKCRCLEYA 552
Score = 63.5 bits (153), Expect = 2e-08
Identities = 36/113 (31%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Frame = -1
Query: 347 VSGYALCGRFAEAEKLFDDMPERNVVSWNAMLAGYVRCLCWDKALDFIF--LMAKESEEM 174
V Y CG A+A ++F ++P+ N V+WN ++ Y+ +A+ F+F + + +
Sbjct: 205 VDVYGKCGVMADARRMFHEIPQPNAVTWNVIVRRYLDAGDAKEAV-FMFSRMFSTSAVRP 263
Query: 173 DNVSLKLILNVCAGVSDLELGKQVHGFVFRHGFCSNLFIGNALVDMYGKCGNL 15
N + L C+ VS L G Q+HG V + G + + ++LV+MY KCG L
Sbjct: 264 MNFTFSNALVACSSVSALREGVQIHGVVVKLGLREDNVVSSSLVNMYVKCGRL 316