BLASTX nr result

ID: Dioscorea21_contig00028459 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028459
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001105822.1| retinoblastoma-related protein 3 [Zea mays] ...   130   1e-28
tpg|DAA48293.1| TPA: hypothetical protein ZEAMMB73_291588 [Zea m...   130   1e-28
tpg|DAA48292.1| TPA: hypothetical protein ZEAMMB73_291588 [Zea m...   130   1e-28
ref|XP_002444671.1| hypothetical protein SORBIDRAFT_07g025760 [S...   130   1e-28
tpg|DAA53326.1| TPA: hypothetical protein ZEAMMB73_924087 [Zea m...   129   3e-28

>ref|NP_001105822.1| retinoblastoma-related protein 3 [Zea mays]
           gi|122239408|sp|Q3LXA7.1|RBR3_MAIZE RecName:
           Full=Retinoblastoma-related protein 3; Short=ZmRBR3
           gi|74099767|gb|AAZ99092.1| retinoblastoma-related 3 [Zea
           mays] gi|414869737|tpg|DAA48294.1| TPA: retinoblastoma
           protein 3 [Zea mays]
          Length = 1010

 Score =  130 bits (326), Expect = 1e-28
 Identities = 62/67 (92%), Positives = 65/67 (97%)
 Frame = -3

Query: 202 ERFHRCMLACSAELVLATHKTVTMMFPAALERAGITAFDLSKVIEGFVRHEETLPRELKR 23
           ERFHRCM+ACSAELVLATHKTVTMMFPA LE+ GITAFDLSKVIEGFVRHE+TLPRELKR
Sbjct: 532 ERFHRCMIACSAELVLATHKTVTMMFPAVLEKTGITAFDLSKVIEGFVRHEDTLPRELKR 591

Query: 22  HLNSLEE 2
           HLNSLEE
Sbjct: 592 HLNSLEE 598


>tpg|DAA48293.1| TPA: hypothetical protein ZEAMMB73_291588 [Zea mays]
          Length = 980

 Score =  130 bits (326), Expect = 1e-28
 Identities = 62/67 (92%), Positives = 65/67 (97%)
 Frame = -3

Query: 202 ERFHRCMLACSAELVLATHKTVTMMFPAALERAGITAFDLSKVIEGFVRHEETLPRELKR 23
           ERFHRCM+ACSAELVLATHKTVTMMFPA LE+ GITAFDLSKVIEGFVRHE+TLPRELKR
Sbjct: 532 ERFHRCMIACSAELVLATHKTVTMMFPAVLEKTGITAFDLSKVIEGFVRHEDTLPRELKR 591

Query: 22  HLNSLEE 2
           HLNSLEE
Sbjct: 592 HLNSLEE 598


>tpg|DAA48292.1| TPA: hypothetical protein ZEAMMB73_291588 [Zea mays]
          Length = 1009

 Score =  130 bits (326), Expect = 1e-28
 Identities = 62/67 (92%), Positives = 65/67 (97%)
 Frame = -3

Query: 202 ERFHRCMLACSAELVLATHKTVTMMFPAALERAGITAFDLSKVIEGFVRHEETLPRELKR 23
           ERFHRCM+ACSAELVLATHKTVTMMFPA LE+ GITAFDLSKVIEGFVRHE+TLPRELKR
Sbjct: 532 ERFHRCMIACSAELVLATHKTVTMMFPAVLEKTGITAFDLSKVIEGFVRHEDTLPRELKR 591

Query: 22  HLNSLEE 2
           HLNSLEE
Sbjct: 592 HLNSLEE 598


>ref|XP_002444671.1| hypothetical protein SORBIDRAFT_07g025760 [Sorghum bicolor]
           gi|241941021|gb|EES14166.1| hypothetical protein
           SORBIDRAFT_07g025760 [Sorghum bicolor]
          Length = 1012

 Score =  130 bits (326), Expect = 1e-28
 Identities = 62/67 (92%), Positives = 65/67 (97%)
 Frame = -3

Query: 202 ERFHRCMLACSAELVLATHKTVTMMFPAALERAGITAFDLSKVIEGFVRHEETLPRELKR 23
           ERFHRCM+ACSAELVLATHKTVTMMFPA LE+ GITAFDLSKVIEGFVRHE+TLPRELKR
Sbjct: 533 ERFHRCMIACSAELVLATHKTVTMMFPAVLEKTGITAFDLSKVIEGFVRHEDTLPRELKR 592

Query: 22  HLNSLEE 2
           HLNSLEE
Sbjct: 593 HLNSLEE 599


>tpg|DAA53326.1| TPA: hypothetical protein ZEAMMB73_924087 [Zea mays]
          Length = 505

 Score =  129 bits (323), Expect = 3e-28
 Identities = 61/67 (91%), Positives = 65/67 (97%)
 Frame = -3

Query: 202 ERFHRCMLACSAELVLATHKTVTMMFPAALERAGITAFDLSKVIEGFVRHEETLPRELKR 23
           ERFHRCM+ACSAELVLATHKTVT+MFPA LE+ GITAFDLSKVIEGFVRHE+TLPRELKR
Sbjct: 34  ERFHRCMIACSAELVLATHKTVTLMFPAVLEKTGITAFDLSKVIEGFVRHEDTLPRELKR 93

Query: 22  HLNSLEE 2
           HLNSLEE
Sbjct: 94  HLNSLEE 100