BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028448
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containi...   124   8e-27
ref|XP_002303960.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-24
ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containi...   111   7e-23
ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containi...   111   7e-23
ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containi...   109   2e-22

>ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score =  124 bits (311), Expect = 8e-27
 Identities = 60/85 (70%), Positives = 73/85 (85%)
 Frame = +3

Query: 3   LRLQEDGKKPDSITLVSILPACAATGSLKIGCSIHGHALRACLESLVNVSTALIDMYSKC 182
           LR+QE+GK+PDSIT+VSILPA A  GSL+IG SIHG+++RA  ES VNVSTAL+DMYSKC
Sbjct: 265 LRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKC 324

Query: 183 GALRAARLVFDRMRVRNVVSWNSMI 257
           G++  ARL+FDRM  + VVSWNSMI
Sbjct: 325 GSVGTARLIFDRMTGKTVVSWNSMI 349



 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 41/84 (48%), Positives = 56/84 (66%)
 Frame = +3

Query: 6   RLQEDGKKPDSITLVSILPACAATGSLKIGCSIHGHALRACLESLVNVSTALIDMYSKCG 185
           ++Q    KPDS T+VS++PA A    L     IHG  +R CL+  V V+TAL+DMY+KCG
Sbjct: 468 KMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCG 527

Query: 186 ALRAARLVFDRMRVRNVVSWNSMI 257
           A+  AR +FD M  R+V +WN+MI
Sbjct: 528 AVHTARKLFDMMDERHVTTWNAMI 551


>ref|XP_002303960.1| predicted protein [Populus trichocarpa] gi|222841392|gb|EEE78939.1|
           predicted protein [Populus trichocarpa]
          Length = 704

 Score =  114 bits (286), Expect = 6e-24
 Identities = 56/85 (65%), Positives = 69/85 (81%)
 Frame = +3

Query: 3   LRLQEDGKKPDSITLVSILPACAATGSLKIGCSIHGHALRACLESLVNVSTALIDMYSKC 182
           LR+ E+G +PDSIT+VSILPA A T  L+IG ++HG+ LRA  ESLVNVSTAL+DMYSKC
Sbjct: 120 LRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKC 179

Query: 183 GALRAARLVFDRMRVRNVVSWNSMI 257
           G++  AR++FD M  R VVSWNSMI
Sbjct: 180 GSVSIARVIFDGMDHRTVVSWNSMI 204



 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 39/83 (46%), Positives = 54/83 (65%)
 Frame = +3

Query: 9   LQEDGKKPDSITLVSILPACAATGSLKIGCSIHGHALRACLESLVNVSTALIDMYSKCGA 188
           +Q    KPDS T+VS++PA A     +    IHG  +R  L+  V V TAL+DMY+KCGA
Sbjct: 324 MQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGA 383

Query: 189 LRAARLVFDRMRVRNVVSWNSMI 257
           +  AR +FD M  R+V++WN+MI
Sbjct: 384 IHTARKLFDMMNARHVITWNAMI 406



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/84 (36%), Positives = 52/84 (61%)
 Frame = +3

Query: 6   RLQEDGKKPDSITLVSILPACAATGSLKIGCSIHGHALRACLESLVNVSTALIDMYSKCG 185
           ++ ++G +P ++T++  L ACA  G L+ G  +H    +  L+S V+V  +LI MYSKC 
Sbjct: 222 KMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCK 281

Query: 186 ALRAARLVFDRMRVRNVVSWNSMI 257
            +  A  +F  +R + +VSWN+MI
Sbjct: 282 RVDIAADIFKNLRNKTLVSWNAMI 305


>ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  111 bits (277), Expect = 7e-23
 Identities = 52/85 (61%), Positives = 68/85 (80%)
 Frame = +3

Query: 3   LRLQEDGKKPDSITLVSILPACAATGSLKIGCSIHGHALRACLESLVNVSTALIDMYSKC 182
           LR+Q++G++PDSITLV++LPA A  G L +G SIHG+A+RA    LVN+STAL DMYSKC
Sbjct: 237 LRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKC 296

Query: 183 GALRAARLVFDRMRVRNVVSWNSMI 257
           G++  ARL+FD M  + VVSWNSM+
Sbjct: 297 GSVETARLIFDGMDQKTVVSWNSMM 321



 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 39/79 (49%), Positives = 56/79 (70%)
 Frame = +3

Query: 21  GKKPDSITLVSILPACAATGSLKIGCSIHGHALRACLESLVNVSTALIDMYSKCGALRAA 200
           G KPDS T+VS++PA A     +    IHG  +R+CL+  + V+TAL+DMYSKCGA+  A
Sbjct: 445 GMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMA 504

Query: 201 RLVFDRMRVRNVVSWNSMI 257
           R +FD +  R+V++WN+MI
Sbjct: 505 RKLFDMISDRHVITWNAMI 523



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/84 (36%), Positives = 48/84 (57%)
 Frame = +3

Query: 6   RLQEDGKKPDSITLVSILPACAATGSLKIGCSIHGHALRACLESLVNVSTALIDMYSKCG 185
           ++ E+G  P  +T++  L ACA  G L+ G  +H    +  L S ++V  +LI MYSKC 
Sbjct: 339 KMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCK 398

Query: 186 ALRAARLVFDRMRVRNVVSWNSMI 257
            +  A  +F+ +  R  VSWN+MI
Sbjct: 399 RVDIASDIFNNLNGRTHVSWNAMI 422



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/84 (34%), Positives = 44/84 (52%)
 Frame = +3

Query: 6   RLQEDGKKPDSITLVSILPACAATGSLKIGCSIHGHALRACLESLVNVSTALIDMYSKCG 185
           R++ D  KP       +L  C     LK G  IHG  +     + V   T +++MY+KC 
Sbjct: 137 RMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCR 196

Query: 186 ALRAARLVFDRMRVRNVVSWNSMI 257
            +  A  +FDRM  R++VSWN++I
Sbjct: 197 QIDDAYKMFDRMPERDLVSWNTII 220


>ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  111 bits (277), Expect = 7e-23
 Identities = 52/85 (61%), Positives = 68/85 (80%)
 Frame = +3

Query: 3   LRLQEDGKKPDSITLVSILPACAATGSLKIGCSIHGHALRACLESLVNVSTALIDMYSKC 182
           LR+Q++G++PDSITLV++LPA A  G L +G SIHG+A+RA    LVN+STAL DMYSKC
Sbjct: 237 LRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKC 296

Query: 183 GALRAARLVFDRMRVRNVVSWNSMI 257
           G++  ARL+FD M  + VVSWNSM+
Sbjct: 297 GSVETARLIFDGMDQKTVVSWNSMM 321



 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 39/79 (49%), Positives = 56/79 (70%)
 Frame = +3

Query: 21  GKKPDSITLVSILPACAATGSLKIGCSIHGHALRACLESLVNVSTALIDMYSKCGALRAA 200
           G KPDS T+VS++PA A     +    IHG  +R+CL+  + V+TAL+DMYSKCGA+  A
Sbjct: 445 GMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMA 504

Query: 201 RLVFDRMRVRNVVSWNSMI 257
           R +FD +  R+V++WN+MI
Sbjct: 505 RKLFDMISDRHVITWNAMI 523



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/84 (36%), Positives = 48/84 (57%)
 Frame = +3

Query: 6   RLQEDGKKPDSITLVSILPACAATGSLKIGCSIHGHALRACLESLVNVSTALIDMYSKCG 185
           ++ E+G  P  +T++  L ACA  G L+ G  +H    +  L S ++V  +LI MYSKC 
Sbjct: 339 KMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCK 398

Query: 186 ALRAARLVFDRMRVRNVVSWNSMI 257
            +  A  +F+ +  R  VSWN+MI
Sbjct: 399 RVDIASDIFNNLNGRTHVSWNAMI 422



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/84 (34%), Positives = 44/84 (52%)
 Frame = +3

Query: 6   RLQEDGKKPDSITLVSILPACAATGSLKIGCSIHGHALRACLESLVNVSTALIDMYSKCG 185
           R++ D  KP       +L  C     LK G  IHG  +     + V   T +++MY+KC 
Sbjct: 137 RMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCR 196

Query: 186 ALRAARLVFDRMRVRNVVSWNSMI 257
            +  A  +FDRM  R++VSWN++I
Sbjct: 197 QIDDAYKMFDRMPERDLVSWNTII 220


>ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 818

 Score =  109 bits (273), Expect = 2e-22
 Identities = 55/85 (64%), Positives = 68/85 (80%)
 Frame = +3

Query: 3   LRLQEDGKKPDSITLVSILPACAATGSLKIGCSIHGHALRACLESLVNVSTALIDMYSKC 182
           L++QE G+KPDS+TLVSILPA A   +L+IG SIHG+A R+  ESLVNV+ AL+DMY KC
Sbjct: 235 LQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKC 294

Query: 183 GALRAARLVFDRMRVRNVVSWNSMI 257
           G+ R ARLVF  MR + VVSWN+MI
Sbjct: 295 GSARIARLVFKGMRSKTVVSWNTMI 319



 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 40/83 (48%), Positives = 58/83 (69%)
 Frame = +3

Query: 9   LQEDGKKPDSITLVSILPACAATGSLKIGCSIHGHALRACLESLVNVSTALIDMYSKCGA 188
           +Q  G K D  TLV ++ A A     +    IHG A+RAC+++ V VSTAL+DMY+KCGA
Sbjct: 438 MQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGA 497

Query: 189 LRAARLVFDRMRVRNVVSWNSMI 257
           ++ AR +FD M+ R+V++WN+MI
Sbjct: 498 IKTARKLFDMMQERHVITWNAMI 520



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/85 (36%), Positives = 52/85 (61%)
 Frame = +3

Query: 3   LRLQEDGKKPDSITLVSILPACAATGSLKIGCSIHGHALRACLESLVNVSTALIDMYSKC 182
           L++ ++G+ P  +T++ +L ACA  G L+ G  +H    +  L+S V+V  +LI MYSKC
Sbjct: 336 LKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKC 395

Query: 183 GALRAARLVFDRMRVRNVVSWNSMI 257
             +  A  +F+ +   N V+WN+MI
Sbjct: 396 KRVDIAASIFNNLEKTN-VTWNAMI 419