BLASTX nr result

ID: Dioscorea21_contig00028431 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028431
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002460288.1| hypothetical protein SORBIDRAFT_02g026020 [S...    72   4e-11
gb|AAD25792.1|AC006577_28 F15I1.28, partial [Arabidopsis thaliana]     72   5e-11
ref|NP_001154422.1| BREVIS RADIX-like 3 [Arabidopsis thaliana] g...    72   5e-11
ref|NP_175820.2| BREVIS RADIX-like 3 [Arabidopsis thaliana] gi|3...    72   5e-11
gb|AAW39016.1| At1g54180 [Arabidopsis thaliana]                        72   5e-11

>ref|XP_002460288.1| hypothetical protein SORBIDRAFT_02g026020 [Sorghum bicolor]
           gi|241923665|gb|EER96809.1| hypothetical protein
           SORBIDRAFT_02g026020 [Sorghum bicolor]
          Length = 416

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 54/156 (34%), Positives = 67/156 (42%), Gaps = 27/156 (17%)
 Frame = +1

Query: 52  MLTCIACSKQF-----GCSLDKQPDND----------GAGTPNTHQAIKTLTAQVYYDLH 186
           MLTCIACSKQ      G  L + P++D          GAGTP+T  AIK LTAQ      
Sbjct: 1   MLTCIACSKQQFAAGGGPPLHEPPEDDDVVDGGGAIGGAGTPSTRHAIKALTAQ------ 54

Query: 187 CFPLQIILYFDGFDLIRNFFWKYIKEMVLRETGAYHQCKPCTGAGTRV-RGYEEY----- 348
                                  IK+M L+ +GAY  CKPC G+     R +  Y     
Sbjct: 55  -----------------------IKDMALKASGAYRHCKPCAGSSAAASRRHHPYHHRGG 91

Query: 349 ------EATRSGSERYVYGHHRAGESLTSTPRVYDG 438
                     S S+R+ Y + RAG S  STPR+  G
Sbjct: 92  SGVFGGSDAGSASDRFHYAYRRAGSSAASTPRLRSG 127


>gb|AAD25792.1|AC006577_28 F15I1.28, partial [Arabidopsis thaliana]
          Length = 169

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 53/152 (34%), Positives = 78/152 (51%), Gaps = 7/152 (4%)
 Frame = +1

Query: 52  MLTCIACSKQF-----GCSLDKQPDNDGAGTPNTHQAIKTLTAQVYYDLHCFPLQIILYF 216
           MLTCIAC+KQ      G + ++  ++   GTP T QAIK+LT+Q                
Sbjct: 1   MLTCIACTKQLNTNNGGSTREEDEEHGVIGTPRTKQAIKSLTSQ---------------- 44

Query: 217 DGFDLIRNFFWKYIKEMVLRETGAYHQCKPCTGAGTR--VRGYEEYEATRSGSERYVYGH 390
                        +K+M ++ +GAY  CKPC+G   R   R Y + +A  S S R+ Y +
Sbjct: 45  -------------LKDMAVKASGAYKNCKPCSGTTNRNQNRNYADSDAA-SDSGRFHYSY 90

Query: 391 HRAGESLTSTPRVYDGLELKVNRKNGFVSSEE 486
            RAG + TSTP+++ G E++   K   +SSEE
Sbjct: 91  QRAG-TATSTPKIW-GNEMESRLKG--ISSEE 118


>ref|NP_001154422.1| BREVIS RADIX-like 3 [Arabidopsis thaliana]
           gi|332194938|gb|AEE33059.1| BREVIS RADIX-like 3
           [Arabidopsis thaliana]
          Length = 344

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 53/152 (34%), Positives = 78/152 (51%), Gaps = 7/152 (4%)
 Frame = +1

Query: 52  MLTCIACSKQF-----GCSLDKQPDNDGAGTPNTHQAIKTLTAQVYYDLHCFPLQIILYF 216
           MLTCIAC+KQ      G + ++  ++   GTP T QAIK+LT+Q                
Sbjct: 1   MLTCIACTKQLNTNNGGSTREEDEEHGVIGTPRTKQAIKSLTSQ---------------- 44

Query: 217 DGFDLIRNFFWKYIKEMVLRETGAYHQCKPCTGAGTR--VRGYEEYEATRSGSERYVYGH 390
                        +K+M ++ +GAY  CKPC+G   R   R Y + +A  S S R+ Y +
Sbjct: 45  -------------LKDMAVKASGAYKNCKPCSGTTNRNQNRNYADSDAA-SDSGRFHYSY 90

Query: 391 HRAGESLTSTPRVYDGLELKVNRKNGFVSSEE 486
            RAG + TSTP+++ G E++   K   +SSEE
Sbjct: 91  QRAG-TATSTPKIW-GNEMESRLKG--ISSEE 118


>ref|NP_175820.2| BREVIS RADIX-like 3 [Arabidopsis thaliana]
           gi|332278163|sp|Q5HZ09.2|BRXL3_ARATH RecName:
           Full=Protein Brevis radix-like 3; Short=AtBRXL3
           gi|332194937|gb|AEE33058.1| BREVIS RADIX-like 3
           [Arabidopsis thaliana]
          Length = 370

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 53/152 (34%), Positives = 78/152 (51%), Gaps = 7/152 (4%)
 Frame = +1

Query: 52  MLTCIACSKQF-----GCSLDKQPDNDGAGTPNTHQAIKTLTAQVYYDLHCFPLQIILYF 216
           MLTCIAC+KQ      G + ++  ++   GTP T QAIK+LT+Q                
Sbjct: 1   MLTCIACTKQLNTNNGGSTREEDEEHGVIGTPRTKQAIKSLTSQ---------------- 44

Query: 217 DGFDLIRNFFWKYIKEMVLRETGAYHQCKPCTGAGTR--VRGYEEYEATRSGSERYVYGH 390
                        +K+M ++ +GAY  CKPC+G   R   R Y + +A  S S R+ Y +
Sbjct: 45  -------------LKDMAVKASGAYKNCKPCSGTTNRNQNRNYADSDAA-SDSGRFHYSY 90

Query: 391 HRAGESLTSTPRVYDGLELKVNRKNGFVSSEE 486
            RAG + TSTP+++ G E++   K   +SSEE
Sbjct: 91  QRAG-TATSTPKIW-GNEMESRLKG--ISSEE 118


>gb|AAW39016.1| At1g54180 [Arabidopsis thaliana]
          Length = 370

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 53/152 (34%), Positives = 78/152 (51%), Gaps = 7/152 (4%)
 Frame = +1

Query: 52  MLTCIACSKQF-----GCSLDKQPDNDGAGTPNTHQAIKTLTAQVYYDLHCFPLQIILYF 216
           MLTCIAC+KQ      G + ++  ++   GTP T QAIK+LT+Q                
Sbjct: 1   MLTCIACTKQLNTNNGGSTREEDEEHGVIGTPRTKQAIKSLTSQ---------------- 44

Query: 217 DGFDLIRNFFWKYIKEMVLRETGAYHQCKPCTGAGTR--VRGYEEYEATRSGSERYVYGH 390
                        +K+M ++ +GAY  CKPC+G   R   R Y + +A  S S R+ Y +
Sbjct: 45  -------------LKDMAVKASGAYKNCKPCSGTTNRNQNRNYADSDAA-SDSGRFHYSY 90

Query: 391 HRAGESLTSTPRVYDGLELKVNRKNGFVSSEE 486
            RAG + TSTP+++ G E++   K   +SSEE
Sbjct: 91  QRAG-TATSTPKIW-GNEMESRLKG--ISSEE 118


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