BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028380
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK06647.1| predicted protein [Hordeum vulgare subsp. vulgare]    240   1e-61
ref|XP_002516788.1| pentatricopeptide repeat-containing protein,...   237   9e-61
ref|XP_003567715.1| PREDICTED: pentatricopeptide repeat-containi...   234   4e-60
ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containi...   234   7e-60
ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containi...   230   1e-58

>dbj|BAK06647.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 658

 Score =  240 bits (612), Expect = 1e-61
 Identities = 117/173 (67%), Positives = 138/173 (79%)
 Frame = -2

Query: 523 LNLFDEMRMAGVEPNEITLFGVLSAVASSGTLEQGEWIHNYIHVSSIPLTDNLTAGLIDM 344
           L LF  M  AGVEPN++TL   LSAVA SG LEQG +IH+YI  +SI LTDNL+AGLIDM
Sbjct: 394 LQLFYLMLGAGVEPNDVTLASTLSAVADSGMLEQGRFIHDYIISNSIQLTDNLSAGLIDM 453

Query: 343 YAKHGSIENALQVFDLVRHHTKSVSPWNAVICGLAMHGHESMSLQVFNDLLKTGIKPNSI 164
           YAK GS+ +A+Q+F  V+H   SVSPWNA+IC LA+HGH   SL++F +L +T IKPNS+
Sbjct: 454 YAKCGSVADAIQLFSHVKHKLSSVSPWNAIICSLAIHGHAHTSLELFLELQRTNIKPNSV 513

Query: 163 TFIGVLTACCHAGLVMEGRRHFESMKSKYGIEPNIKHYGCMVDLLGRAGCLEE 5
           T+IGVL ACCHAGLV EGR HFESM  +YGI+P IKHYGCMVDLLGRAG LEE
Sbjct: 514 TYIGVLNACCHAGLVTEGRHHFESMSREYGIQPTIKHYGCMVDLLGRAGHLEE 566


>ref|XP_002516788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543876|gb|EEF45402.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 710

 Score =  237 bits (604), Expect = 9e-61
 Identities = 109/173 (63%), Positives = 142/173 (82%)
 Frame = -2

Query: 523 LNLFDEMRMAGVEPNEITLFGVLSAVASSGTLEQGEWIHNYIHVSSIPLTDNLTAGLIDM 344
           L LF +M  +G++PNE+T+  VLSA+A+SGTL++G W H Y+H +SI ++DNL+A +IDM
Sbjct: 447 LELFHKMVASGIKPNEVTMVSVLSAIATSGTLKEGRWAHEYVHNNSITVSDNLSAAIIDM 506

Query: 343 YAKHGSIENALQVFDLVRHHTKSVSPWNAVICGLAMHGHESMSLQVFNDLLKTGIKPNSI 164
           YAK GSI NAL+VF  +R    +VSPWNA+ICGLA+HGH ++SL++F+DL +  IK N+I
Sbjct: 507 YAKCGSINNALEVFYEIREKASTVSPWNAIICGLAVHGHANLSLKIFSDLERRHIKLNAI 566

Query: 163 TFIGVLTACCHAGLVMEGRRHFESMKSKYGIEPNIKHYGCMVDLLGRAGCLEE 5
           TFIGVLTACCH GLV  G+RHF SMKS++ I+P+IKHYGCMVDLLGRAG LEE
Sbjct: 567 TFIGVLTACCHVGLVESGKRHFMSMKSEHSIDPDIKHYGCMVDLLGRAGRLEE 619


>ref|XP_003567715.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
           mitochondrial-like [Brachypodium distachyon]
          Length = 656

 Score =  234 bits (598), Expect = 4e-60
 Identities = 115/173 (66%), Positives = 136/173 (78%)
 Frame = -2

Query: 523 LNLFDEMRMAGVEPNEITLFGVLSAVASSGTLEQGEWIHNYIHVSSIPLTDNLTAGLIDM 344
           L LF  M  AGV+PN ITL   LSAVA+SGTLEQG WIH+YI   SI LTDNL AGLIDM
Sbjct: 394 LQLFCLMLGAGVKPNHITLASTLSAVANSGTLEQGRWIHDYIISKSIHLTDNLIAGLIDM 453

Query: 343 YAKHGSIENALQVFDLVRHHTKSVSPWNAVICGLAMHGHESMSLQVFNDLLKTGIKPNSI 164
           YAK GS+ +A+ +F+ V+    S+SPWNA+IC LA+HGH  MSL++F+ L  + IKPNSI
Sbjct: 454 YAKCGSVADAVLLFNHVKEKLSSLSPWNAMICSLAIHGHAHMSLELFSQLQSSNIKPNSI 513

Query: 163 TFIGVLTACCHAGLVMEGRRHFESMKSKYGIEPNIKHYGCMVDLLGRAGCLEE 5
           T+IGVL ACCHAG+V EG+ HFESM+ +YGI P IKHYGCMVDLLGRAG LEE
Sbjct: 514 TYIGVLNACCHAGMVTEGKHHFESMRREYGIPPTIKHYGCMVDLLGRAGYLEE 566


>ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
            mitochondrial-like [Glycine max]
          Length = 912

 Score =  234 bits (596), Expect = 7e-60
 Identities = 113/173 (65%), Positives = 133/173 (76%)
 Frame = -2

Query: 523  LNLFDEMRMAGVEPNEITLFGVLSAVASSGTLEQGEWIHNYIHVSSIPLTDNLTAGLIDM 344
            L LF +M  +G++PNE+T+  V SA+A+ GTL++G W H YI   SIPL DNL A LIDM
Sbjct: 650  LELFHKMVASGIKPNEVTMVSVFSAIATLGTLKEGRWAHEYICNESIPLNDNLRAALIDM 709

Query: 343  YAKHGSIENALQVFDLVRHHTKSVSPWNAVICGLAMHGHESMSLQVFNDLLKTGIKPNSI 164
            YAK GSI +ALQ F+ +R  T SVSPWNA+ICGLA HGH SM L VF+D+ +  IKPN I
Sbjct: 710  YAKCGSINSALQFFNQIRDKTFSVSPWNAIICGLASHGHASMCLDVFSDMQRYNIKPNPI 769

Query: 163  TFIGVLTACCHAGLVMEGRRHFESMKSKYGIEPNIKHYGCMVDLLGRAGCLEE 5
            TFIGVL+ACCHAGLV  GRR F  MKS Y +EP+IKHYGCMVDLLGRAG LEE
Sbjct: 770  TFIGVLSACCHAGLVEPGRRIFRIMKSAYNVEPDIKHYGCMVDLLGRAGLLEE 822


>ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
           mitochondrial [Vitis vinifera]
          Length = 694

 Score =  230 bits (586), Expect = 1e-58
 Identities = 111/173 (64%), Positives = 134/173 (77%)
 Frame = -2

Query: 523 LNLFDEMRMAGVEPNEITLFGVLSAVASSGTLEQGEWIHNYIHVSSIPLTDNLTAGLIDM 344
           L LF EM   GV+PNEIT+  V SA+A+ GTL +G W H YI  +SIPL DNL A LIDM
Sbjct: 433 LQLFHEMVAGGVQPNEITMVSVFSAIATLGTLMEGRWAHEYILSNSIPLNDNLNAALIDM 492

Query: 343 YAKHGSIENALQVFDLVRHHTKSVSPWNAVICGLAMHGHESMSLQVFNDLLKTGIKPNSI 164
           YAK GSI  ALQ+F  ++    SVSPWNA+ICGLAMHGH ++SL++F+ L +  IKPNSI
Sbjct: 493 YAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVSLKLFSQLQRVRIKPNSI 552

Query: 163 TFIGVLTACCHAGLVMEGRRHFESMKSKYGIEPNIKHYGCMVDLLGRAGCLEE 5
           TFIGVL+ACCHAGLV  G ++F+ MK+ Y IEPNIKHYGCM+DLLGRAG L+E
Sbjct: 553 TFIGVLSACCHAGLVDTGEKYFKGMKNLYNIEPNIKHYGCMIDLLGRAGRLKE 605



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 49/202 (24%), Positives = 90/202 (44%), Gaps = 31/202 (15%)
 Frame = -2

Query: 523 LNLFDEMRMAGVEPNEITLFGVLSAVASSGTLEQGEWIHNYIHVSSIPLTDNLTAGLIDM 344
           L ++  M   GV PNE+ +  ++SA   +  + +G+  H  I  +     D + A +I  
Sbjct: 301 LRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHF 360

Query: 343 YA-------------------------------KHGSIENALQVFDLVRHHTKSVSPWNA 257
           YA                               ++G IE A Q+FD +    + V  W++
Sbjct: 361 YAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPE--RDVFSWSS 418

Query: 256 VICGLAMHGHESMSLQVFNDLLKTGIKPNSITFIGVLTACCHAGLVMEGRRHFESMKSKY 77
           +I G + +    ++LQ+F++++  G++PN IT + V +A    G +MEGR   E + S  
Sbjct: 419 MISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGTLMEGRWAHEYILSN- 477

Query: 76  GIEPNIKHYGCMVDLLGRAGCL 11
            I  N      ++D+  + G +
Sbjct: 478 SIPLNDNLNAALIDMYAKCGSI 499



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 50/191 (26%), Positives = 79/191 (41%), Gaps = 35/191 (18%)
 Frame = -2

Query: 478 EITLFGVLSAVASSGTLEQGEWIHNYIHVSSIPLTDNLTAGLIDMYAKHGSIENALQVFD 299
           E+TL   L + +S   L QG+ IH+ +  S +     +   LI  Y K   I NA  +FD
Sbjct: 52  ELTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFD 111

Query: 298 ------------LVRHHTKSVSPWNA-----------------VICGLAMHGHESMSLQV 206
                       ++  + KS S  NA                 ++ GLA +     ++ V
Sbjct: 112 TCSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGV 171

Query: 205 FNDLLKTGIKPNSITFIGVLTACCHAGLVMEGRRHFESMKSKYGIE------PNIKHYGC 44
           F D+   G+ PN +T   V++A  H G ++  R    ++  K G+E       N+ H  C
Sbjct: 172 FKDMRFAGVIPNEVTLASVISAYSHVGGILNCRM-LHALSFKLGLEALNIVATNLVHMYC 230

Query: 43  MVDLLGRAGCL 11
           +   LG A  L
Sbjct: 231 VCSSLGNARVL 241