BLASTX nr result

ID: Dioscorea21_contig00028379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028379
         (599 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [...   154   1e-35
ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   147   1e-33
ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containi...   142   3e-32
ref|XP_003571663.1| PREDICTED: putative pentatricopeptide repeat...   139   4e-31
gb|AAK63878.1|AC074105_7 Putative salt-inducible protein [Oryza ...   133   3e-29

>ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
          Length = 871

 Score =  154 bits (389), Expect = 1e-35
 Identities = 72/125 (57%), Positives = 96/125 (76%)
 Frame = -3

Query: 597  LLSMGFAPNTVTYNTMMNGTCNDVLDRAMILTGKLLKMIFLTNVVTINLLLSHFCKQHMY 418
            L+S G  P+TVTYNTM++G C+D+LDRAMILT KLLKM F+ NV+T N+LLSHFCKQ M 
Sbjct: 728  LISAGIVPDTVTYNTMLSGICSDILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMP 787

Query: 417  KKALIWGEKLSQLPFNFDDATWNILKQAYDNPQEDVVSSKTEHSRSLFLDFLMHSTYEYL 238
            +KALIWG+KL ++ F FD+ ++ IL QAY   Q+DV   +  + + LF+DFLM+ T++Y 
Sbjct: 788  EKALIWGQKLREISFGFDEISYRILDQAYCLMQDDVELVRGTYEKHLFMDFLMYITFDYF 847

Query: 237  LRNKP 223
             RNKP
Sbjct: 848  SRNKP 852


>ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At1g19290-like [Cucumis
            sativus]
          Length = 885

 Score =  147 bits (371), Expect = 1e-33
 Identities = 68/129 (52%), Positives = 92/129 (71%)
 Frame = -3

Query: 597  LLSMGFAPNTVTYNTMMNGTCNDVLDRAMILTGKLLKMIFLTNVVTINLLLSHFCKQHMY 418
            L+S+G  PNTVTYNTM+N  CN +LD AMILT KLLKM F+ N VT+N+LLS FCKQ M 
Sbjct: 738  LISVGIVPNTVTYNTMINAVCNVILDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMP 797

Query: 417  KKALIWGEKLSQLPFNFDDATWNILKQAYDNPQEDVVSSKTEHSRSLFLDFLMHSTYEYL 238
            +KA+ WG+KLS++  +FD+ T  ++ +AY   +E  V   T + +S+F+DFLM+ TY+Y 
Sbjct: 798  EKAIFWGQKLSEIHLDFDETTHKLMNRAYRALEEGGVVINTSYEKSVFMDFLMYITYDYF 857

Query: 237  LRNKPAEHK 211
             R KP   K
Sbjct: 858  CRTKPLREK 866


>ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein At5g39710-like
            [Vitis vinifera]
          Length = 889

 Score =  142 bits (359), Expect = 3e-32
 Identities = 69/125 (55%), Positives = 94/125 (75%)
 Frame = -3

Query: 597  LLSMGFAPNTVTYNTMMNGTCNDVLDRAMILTGKLLKMIFLTNVVTINLLLSHFCKQHMY 418
            L+S G  PNTVTYN+M+NG C+D+LDRAMILT +LLKM F+ NVVT NLLLS F KQ M 
Sbjct: 747  LVSAGIVPNTVTYNSMLNGVCSDILDRAMILTARLLKMAFVPNVVTANLLLSQFYKQGMP 806

Query: 417  KKALIWGEKLSQLPFNFDDATWNILKQAYDNPQEDVVSSKTEHSRSLFLDFLMHSTYEYL 238
            ++ L+WG KLS++P+ FD+ T+ I+ +A+ +  ED   S+   ++SLFLDFLM+ TY+Y 
Sbjct: 807  ERTLMWGHKLSEIPYAFDEITYKIMDKAH-HILEDADFSRVTSAKSLFLDFLMYITYDYF 865

Query: 237  LRNKP 223
             R +P
Sbjct: 866  CRYRP 870


>ref|XP_003571663.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g74580-like [Brachypodium distachyon]
          Length = 841

 Score =  139 bits (350), Expect = 4e-31
 Identities = 68/136 (50%), Positives = 93/136 (68%)
 Frame = -3

Query: 597  LLSMGFAPNTVTYNTMMNGTCNDVLDRAMILTGKLLKMIFLTNVVTINLLLSHFCKQHMY 418
            L++MG  PN+VTYNT+M+G C+DVLDRAMILTGKL+KM F  N VT+N+  SHFCKQ   
Sbjct: 691  LVAMGCMPNSVTYNTLMDGICSDVLDRAMILTGKLIKMAFQPNTVTVNVFFSHFCKQGFG 750

Query: 417  KKALIWGEKLSQLPFNFDDATWNILKQAYDNPQEDVVSSKTEHSRSLFLDFLMHSTYEYL 238
            K+AL+W EKL +    FDDAT NIL  AY   ++D  +S  +  R LFL+FLM  TY+ +
Sbjct: 751  KRALVWAEKLKEDSVAFDDATMNILDWAYKEMEDDSQASNADIDRCLFLEFLMLMTYKAM 810

Query: 237  LRNKPAEHKQLMIPDI 190
              ++ ++   + I  +
Sbjct: 811  RNSRSSKFTYVPIETV 826


>gb|AAK63878.1|AC074105_7 Putative salt-inducible protein [Oryza sativa]
            gi|222612440|gb|EEE50572.1| hypothetical protein
            OsJ_30721 [Oryza sativa Japonica Group]
          Length = 854

 Score =  133 bits (334), Expect = 3e-29
 Identities = 66/133 (49%), Positives = 89/133 (66%)
 Frame = -3

Query: 579  APNTVTYNTMMNGTCNDVLDRAMILTGKLLKMIFLTNVVTINLLLSHFCKQHMYKKALIW 400
            APN+VTYNT+M+G C+DVLDRAMILTG+L+K+ F  N VTIN+L SHFCK    K+AL+W
Sbjct: 713  APNSVTYNTLMDGICSDVLDRAMILTGRLIKLAFQPNTVTINILFSHFCKNGFGKRALVW 772

Query: 399  GEKLSQLPFNFDDATWNILKQAYDNPQEDVVSSKTEHSRSLFLDFLMHSTYEYLLRNKPA 220
             EKL    FNFDDAT NIL  AY + ++D  +S  +  + LFL+FLM  T   +  ++  
Sbjct: 773  AEKLRDDSFNFDDATRNILDWAYRDMEDDPHASSADIDKCLFLEFLMLMTCTTIRNSRSF 832

Query: 219  EHKQLMIPDIIDH 181
            +   + I  +  H
Sbjct: 833  KFTHVPINTVFGH 845


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