BLASTX nr result

ID: Dioscorea21_contig00028369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028369
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326001.1| GRAS family transcription factor [Populus tr...   120   9e-26
emb|CBI18535.3| unnamed protein product [Vitis vinifera]              119   3e-25
ref|XP_002266212.1| PREDICTED: DELLA protein RGL2 [Vitis vinifera]    119   3e-25
emb|CAN77508.1| hypothetical protein VITISV_037741 [Vitis vinifera]   119   3e-25
ref|XP_002526847.1| DELLA protein GAI1, putative [Ricinus commun...   117   1e-24

>ref|XP_002326001.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222862876|gb|EEF00383.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 463

 Score =  120 bits (302), Expect = 9e-26
 Identities = 64/113 (56%), Positives = 81/113 (71%)
 Frame = +2

Query: 2   LASFAKGCKNLVFEFEGLVMKGCTNNPPSNSINELIKIKKNATVVVNLVLYLSTLKSYTE 181
           L SFAKG +NLVFEF+GL+      N         ++ KKN TV VNLV +L+TL    +
Sbjct: 245 LLSFAKGFRNLVFEFQGLLRGSKLFN---------LRKKKNETVAVNLVFHLNTLNDSLK 295

Query: 182 ISETLTSIHRMNPYAVVVVDKEGGRNCRSFLSIFMESLHYYAAMFDSLEDCLP 340
           IS+TL S+H +NP  VV+V++EG R+ RSFLS FMESLHY+AAMFDSL+DCLP
Sbjct: 296 ISDTLKSVHSLNPSIVVLVEQEGSRSPRSFLSRFMESLHYFAAMFDSLDDCLP 348


>emb|CBI18535.3| unnamed protein product [Vitis vinifera]
          Length = 326

 Score =  119 bits (298), Expect = 3e-25
 Identities = 61/113 (53%), Positives = 81/113 (71%)
 Frame = +2

Query: 2   LASFAKGCKNLVFEFEGLVMKGCTNNPPSNSINELIKIKKNATVVVNLVLYLSTLKSYTE 181
           L SF+K  +NLVFEF+GL+      N         ++ KKN TV  NLV +L+TL S+ +
Sbjct: 187 LISFSKAFRNLVFEFQGLLRGSKLTN---------LRKKKNETVAANLVFHLNTLTSFLK 237

Query: 182 ISETLTSIHRMNPYAVVVVDKEGGRNCRSFLSIFMESLHYYAAMFDSLEDCLP 340
           ISETL S+H +NP  V++V++EG R+ +SFLS FMESLHY+AAMFDSL+DCLP
Sbjct: 238 ISETLKSVHSLNPSIVILVEQEGSRSPQSFLSRFMESLHYFAAMFDSLDDCLP 290


>ref|XP_002266212.1| PREDICTED: DELLA protein RGL2 [Vitis vinifera]
          Length = 455

 Score =  119 bits (298), Expect = 3e-25
 Identities = 61/113 (53%), Positives = 81/113 (71%)
 Frame = +2

Query: 2   LASFAKGCKNLVFEFEGLVMKGCTNNPPSNSINELIKIKKNATVVVNLVLYLSTLKSYTE 181
           L SF+K  +NLVFEF+GL+      N         ++ KKN TV  NLV +L+TL S+ +
Sbjct: 239 LISFSKAFRNLVFEFQGLLRGSKLTN---------LRKKKNETVAANLVFHLNTLTSFLK 289

Query: 182 ISETLTSIHRMNPYAVVVVDKEGGRNCRSFLSIFMESLHYYAAMFDSLEDCLP 340
           ISETL S+H +NP  V++V++EG R+ +SFLS FMESLHY+AAMFDSL+DCLP
Sbjct: 290 ISETLKSVHSLNPSIVILVEQEGSRSPQSFLSRFMESLHYFAAMFDSLDDCLP 342


>emb|CAN77508.1| hypothetical protein VITISV_037741 [Vitis vinifera]
          Length = 419

 Score =  119 bits (298), Expect = 3e-25
 Identities = 61/113 (53%), Positives = 81/113 (71%)
 Frame = +2

Query: 2   LASFAKGCKNLVFEFEGLVMKGCTNNPPSNSINELIKIKKNATVVVNLVLYLSTLKSYTE 181
           L SF+K  +NLVFEF+GL+      N         ++ KKN TV  NLV +L+TL S+ +
Sbjct: 239 LISFSKAFRNLVFEFQGLLRGSKLTN---------LRKKKNETVAANLVFHLNTLTSFLK 289

Query: 182 ISETLTSIHRMNPYAVVVVDKEGGRNCRSFLSIFMESLHYYAAMFDSLEDCLP 340
           ISETL S+H +NP  V++V++EG R+ +SFLS FMESLHY+AAMFDSL+DCLP
Sbjct: 290 ISETLKSVHSLNPSIVILVEQEGSRSPQSFLSRFMESLHYFAAMFDSLDDCLP 342


>ref|XP_002526847.1| DELLA protein GAI1, putative [Ricinus communis]
           gi|223533851|gb|EEF35582.1| DELLA protein GAI1, putative
           [Ricinus communis]
          Length = 471

 Score =  117 bits (293), Expect = 1e-24
 Identities = 63/113 (55%), Positives = 83/113 (73%)
 Frame = +2

Query: 2   LASFAKGCKNLVFEFEGLVMKGCTNNPPSNSINELIKIKKNATVVVNLVLYLSTLKSYTE 181
           L SFAKG +NLVF+F+GL ++G      S  I+     KKN TV VNLV +L+TL  + +
Sbjct: 249 LVSFAKGFRNLVFDFQGL-LRG------SKIISNPRIRKKNETVAVNLVSHLNTLNDFLK 301

Query: 182 ISETLTSIHRMNPYAVVVVDKEGGRNCRSFLSIFMESLHYYAAMFDSLEDCLP 340
           I +TL SIH +NP  V++V++EG R+ RSFLS FMESLHY+AAM+DSL+DCLP
Sbjct: 302 IPDTLKSIHSLNPSIVILVEQEGSRSPRSFLSRFMESLHYFAAMYDSLDDCLP 354


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