BLASTX nr result

ID: Dioscorea21_contig00028340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028340
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65842.1| hypothetical protein VITISV_027369 [Vitis vinifera]   217   7e-55
gb|ADN34114.1| retrotransposon protein [Cucumis melo subsp. melo]     195   4e-48
gb|ADN33754.1| retrotransposon protein [Cucumis melo subsp. melo]     192   2e-47
ref|XP_003632575.1| PREDICTED: uncharacterized protein LOC100852...   192   3e-47
gb|AEJ07903.1| putative PIFa transposase [Zea mays subsp. mexicana]   191   5e-47

>emb|CAN65842.1| hypothetical protein VITISV_027369 [Vitis vinifera]
          Length = 579

 Score =  217 bits (553), Expect = 7e-55
 Identities = 100/139 (71%), Positives = 115/139 (82%)
 Frame = -1

Query: 419 GALDGTHIRVNVPRVDRP*YRTRKSEITTNVLGVCSHDMQFIYVLSGWEGSAHDGRVLRD 240
           GALDGT+I+VNV   D+P YRTRK+EI TNVLGVCS DMQFIYVL GWEGS  D RVLRD
Sbjct: 173 GALDGTYIKVNVREGDKPRYRTRKNEIATNVLGVCSQDMQFIYVLPGWEGSTSDSRVLRD 232

Query: 239 AITKPNGLKVPNGFYYLVDSGYANCPGFLAPFRGQRYHLSSWSDGHQPVTPEEFFNMKHA 60
           A+++ NGL VP+G+YYLVD GY N  GFLAP+RGQRYHL+ W +GH P T EEFFNMKH+
Sbjct: 233 AVSRRNGLTVPHGYYYLVDVGYTNGKGFLAPYRGQRYHLNDWREGHMPTTHEEFFNMKHS 292

Query: 59  SVRNVIERTFGLLKIRWKI 3
           + RNVIER FGLLK+RW I
Sbjct: 293 AARNVIERCFGLLKLRWAI 311


>gb|ADN34114.1| retrotransposon protein [Cucumis melo subsp. melo]
          Length = 657

 Score =  195 bits (495), Expect = 4e-48
 Identities = 93/140 (66%), Positives = 107/140 (76%), Gaps = 1/140 (0%)
 Frame = -1

Query: 419 GALDGTHIRVNVPRVDRP*YRTRKSEITTNVLGVCSHDMQFIYVLSGWEGSAHDGRVLRD 240
           GALDGT+I+VNVP  DR  YRTRK E+ TNVLGVC     F+YVL+GWEGSA D R+LRD
Sbjct: 142 GALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRD 201

Query: 239 AITKPNGLKVPNGFYYLVDSGYANCPGFLAPFRGQRYHLSSW-SDGHQPVTPEEFFNMKH 63
           A+++PN LKVP G+YYLVD GY N  GFLAP+RGQRYHL  W    + P T +EFFNMKH
Sbjct: 202 ALSRPNRLKVPKGYYYLVDVGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKH 261

Query: 62  ASVRNVIERTFGLLKIRWKI 3
            S RNVIER FG+LK RW I
Sbjct: 262 YSARNVIERAFGVLKGRWAI 281


>gb|ADN33754.1| retrotransposon protein [Cucumis melo subsp. melo]
          Length = 623

 Score =  192 bits (489), Expect = 2e-47
 Identities = 90/140 (64%), Positives = 108/140 (77%), Gaps = 1/140 (0%)
 Frame = -1

Query: 419 GALDGTHIRVNVPRVDRP*YRTRKSEITTNVLGVCSHDMQFIYVLSGWEGSAHDGRVLRD 240
           GALDGT+I+VNVP  DRP +RTRK EI TNVLGVC     F+YVL+GWEGSA D R+LRD
Sbjct: 114 GALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDMKGDFVYVLAGWEGSAADSRILRD 173

Query: 239 AITKPNGLKVPNGFYYLVDSGYANCPGFLAPFRGQRYHLSSW-SDGHQPVTPEEFFNMKH 63
           AI++ NGL+VP G+YYL D+GY N  GFLAP++GQRYHL  W    + P   +E+FNMKH
Sbjct: 174 AISQENGLQVPKGYYYLCDAGYPNAEGFLAPYKGQRYHLQEWRGAANAPTNAKEYFNMKH 233

Query: 62  ASVRNVIERTFGLLKIRWKI 3
           +S RNVIER FG+LK RW I
Sbjct: 234 SSARNVIERAFGVLKGRWTI 253


>ref|XP_003632575.1| PREDICTED: uncharacterized protein LOC100852451 [Vitis vinifera]
          Length = 261

 Score =  192 bits (487), Expect = 3e-47
 Identities = 90/132 (68%), Positives = 103/132 (78%)
 Frame = -1

Query: 419 GALDGTHIRVNVPRVDRP*YRTRKSEITTNVLGVCSHDMQFIYVLSGWEGSAHDGRVLRD 240
           GALDGT+ RVNVP+ D+P YRTRK+EI TNVLGVCS DM+FIYV  GWEGS  D RVLRD
Sbjct: 107 GALDGTYTRVNVPKGDKPRYRTRKNEIATNVLGVCSQDMRFIYVFPGWEGSTSDSRVLRD 166

Query: 239 AITKPNGLKVPNGFYYLVDSGYANCPGFLAPFRGQRYHLSSWSDGHQPVTPEEFFNMKHA 60
           A++K NGL VP+G YYLVD GY N  GFLAP+RGQRYHL  W +GH P T EEFFNMKH+
Sbjct: 167 AVSKRNGLTVPHGKYYLVDVGYTNGKGFLAPYRGQRYHLIDWREGHMPTTHEEFFNMKHS 226

Query: 59  SVRNVIERTFGL 24
           + RN  +   GL
Sbjct: 227 AARNGYKDANGL 238


>gb|AEJ07903.1| putative PIFa transposase [Zea mays subsp. mexicana]
          Length = 558

 Score =  191 bits (485), Expect = 5e-47
 Identities = 89/140 (63%), Positives = 108/140 (77%), Gaps = 1/140 (0%)
 Frame = -1

Query: 419 GALDGTHIRVNVPRVDRP*YRTRKSEITTNVLGVCSHDMQFIYVLSGWEGSAHDGRVLRD 240
           GALDGTHI VNVP  D+  YR RK  ITTNVLGVC   M+F+YVL+GWEGSA D R+LRD
Sbjct: 150 GALDGTHIDVNVPLTDQGRYRNRKQRITTNVLGVCDRQMKFLYVLAGWEGSASDSRILRD 209

Query: 239 AITKPNGLKVPNGFYYLVDSGYANCPGFLAPFRGQRYHLSSWS-DGHQPVTPEEFFNMKH 63
           A+++ +   VP+G YYLVD+GY N PGFLAP+R  RYHL+ W+  G+ P T  E FN++H
Sbjct: 210 AMSREDSFVVPSGKYYLVDAGYTNGPGFLAPYRSTRYHLNEWAIQGNNPSTARELFNLRH 269

Query: 62  ASVRNVIERTFGLLKIRWKI 3
           A+ RNVIERTFGLLK+RW I
Sbjct: 270 ATARNVIERTFGLLKMRWAI 289


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