BLASTX nr result

ID: Dioscorea21_contig00028338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028338
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA40915.1| TPA: hypothetical protein ZEAMMB73_602056 [Zea m...   150   3e-35
ref|XP_002460734.1| hypothetical protein SORBIDRAFT_02g034000 [S...   148   1e-34
ref|XP_002277737.2| PREDICTED: ATP-dependent DNA helicase pcrA-l...   146   1e-34
emb|CBI38559.3| unnamed protein product [Vitis vinifera]              146   1e-34
emb|CAN81554.1| hypothetical protein VITISV_028620 [Vitis vinifera]   145   4e-33

>tpg|DAA40915.1| TPA: hypothetical protein ZEAMMB73_602056 [Zea mays]
          Length = 439

 Score =  150 bits (380), Expect(2) = 3e-35
 Identities = 69/101 (68%), Positives = 87/101 (86%)
 Frame = -3

Query: 337 TKQKASGRIPEDSEKLGDKIGATILRNYSHILASCNALDYPDFISSSVKLLSDIPKVYQE 158
           T+ KASGR PED EK GD  GA++LR+Y+ IL SCNALDY DFI+SS+ LL++ P+VY+E
Sbjct: 127 TQAKASGRTPEDYEKKGDLTGASVLRHYNEILRSCNALDYHDFINSSITLLTNFPEVYKE 186

Query: 157 CLGIWKAILVDEFQDTSSMQYCLLRILSSHGHVTIVGDEDQ 35
           C  +W+AI+VDEFQDTS+MQYCLL+IL+SH H+TIVGDEDQ
Sbjct: 187 CQDMWRAIVVDEFQDTSAMQYCLLKILASHNHITIVGDEDQ 227



 Score = 22.7 bits (47), Expect(2) = 3e-35
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -1

Query: 36  SFNGADICGFN 4
           SFNGAD+ GF+
Sbjct: 231 SFNGADVSGFD 241


>ref|XP_002460734.1| hypothetical protein SORBIDRAFT_02g034000 [Sorghum bicolor]
           gi|241924111|gb|EER97255.1| hypothetical protein
           SORBIDRAFT_02g034000 [Sorghum bicolor]
          Length = 1185

 Score =  148 bits (374), Expect(2) = 1e-34
 Identities = 68/101 (67%), Positives = 86/101 (85%)
 Frame = -3

Query: 337 TKQKASGRIPEDSEKLGDKIGATILRNYSHILASCNALDYPDFISSSVKLLSDIPKVYQE 158
           T+ KASGR PED E  GD  GA++LR+Y+ IL SCNALDY DFI+SS+ LL++ P+VY+E
Sbjct: 463 TQAKASGRTPEDYEMKGDLTGASVLRHYNEILRSCNALDYHDFINSSITLLTNFPEVYKE 522

Query: 157 CLGIWKAILVDEFQDTSSMQYCLLRILSSHGHVTIVGDEDQ 35
           C  +W+AI+VDEFQDTS+MQYCLL+IL+SH H+TIVGDEDQ
Sbjct: 523 CQDMWRAIVVDEFQDTSAMQYCLLKILASHNHITIVGDEDQ 563



 Score = 22.7 bits (47), Expect(2) = 1e-34
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -1

Query: 36  SFNGADICGFN 4
           SFNGAD+ GF+
Sbjct: 567 SFNGADVSGFD 577


>ref|XP_002277737.2| PREDICTED: ATP-dependent DNA helicase pcrA-like [Vitis vinifera]
          Length = 1113

 Score =  146 bits (369), Expect(2) = 1e-34
 Identities = 68/101 (67%), Positives = 84/101 (83%)
 Frame = -3

Query: 337 TKQKASGRIPEDSEKLGDKIGATILRNYSHILASCNALDYPDFISSSVKLLSDIPKVYQE 158
           T+ KASG+ PE+   +GD+IGA+IL NYS IL +CNALDY D IS SVKLLSD P+V++E
Sbjct: 374 TQAKASGKTPEECRNMGDEIGASILGNYSKILRTCNALDYHDLISCSVKLLSDFPEVFRE 433

Query: 157 CLGIWKAILVDEFQDTSSMQYCLLRILSSHGHVTIVGDEDQ 35
           C   WKA+++DEFQDTS+MQYCLLRIL+SH  +TIVGDEDQ
Sbjct: 434 CQESWKAVVIDEFQDTSAMQYCLLRILASHNRITIVGDEDQ 474



 Score = 24.6 bits (52), Expect(2) = 1e-34
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = -1

Query: 36  SFNGADICGFN 4
           SFNGAD+ GFN
Sbjct: 478 SFNGADVSGFN 488


>emb|CBI38559.3| unnamed protein product [Vitis vinifera]
          Length = 951

 Score =  146 bits (369), Expect(2) = 1e-34
 Identities = 68/101 (67%), Positives = 84/101 (83%)
 Frame = -3

Query: 337 TKQKASGRIPEDSEKLGDKIGATILRNYSHILASCNALDYPDFISSSVKLLSDIPKVYQE 158
           T+ KASG+ PE+   +GD+IGA+IL NYS IL +CNALDY D IS SVKLLSD P+V++E
Sbjct: 172 TQAKASGKTPEECRNMGDEIGASILGNYSKILRTCNALDYHDLISCSVKLLSDFPEVFRE 231

Query: 157 CLGIWKAILVDEFQDTSSMQYCLLRILSSHGHVTIVGDEDQ 35
           C   WKA+++DEFQDTS+MQYCLLRIL+SH  +TIVGDEDQ
Sbjct: 232 CQESWKAVVIDEFQDTSAMQYCLLRILASHNRITIVGDEDQ 272



 Score = 24.6 bits (52), Expect(2) = 1e-34
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = -1

Query: 36  SFNGADICGFN 4
           SFNGAD+ GFN
Sbjct: 276 SFNGADVSGFN 286


>emb|CAN81554.1| hypothetical protein VITISV_028620 [Vitis vinifera]
          Length = 267

 Score =  145 bits (365), Expect = 4e-33
 Identities = 67/100 (67%), Positives = 83/100 (83%)
 Frame = -3

Query: 328 KASGRIPEDSEKLGDKIGATILRNYSHILASCNALDYPDFISSSVKLLSDIPKVYQECLG 149
           KASG+ PE+   +GD+IGA+IL NYS IL +CNALDY D IS SVKLLSD P+V++EC  
Sbjct: 34  KASGKTPEECRNMGDEIGASILGNYSKILRTCNALDYHDLISCSVKLLSDFPEVFRECQE 93

Query: 148 IWKAILVDEFQDTSSMQYCLLRILSSHGHVTIVGDEDQFQ 29
            WKA+++DEFQDTS+MQYCLLRIL+SH  +TIVGDEDQ +
Sbjct: 94  SWKAVVIDEFQDTSAMQYCLLRILASHNRITIVGDEDQIR 133


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