BLASTX nr result

ID: Dioscorea21_contig00028315 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028315
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272706.1| PREDICTED: uncharacterized protein LOC100260...    96   3e-18
ref|XP_002311241.1| predicted protein [Populus trichocarpa] gi|2...    94   9e-18
ref|XP_002528315.1| r2r3-myb transcription factor, putative [Ric...    93   2e-17
ref|XP_003518439.1| PREDICTED: myb-related protein A [Glycine max]     89   5e-16
dbj|BAB91464.1| Myb transcription factor [Chamaecyparis pisifera]      87   1e-15

>ref|XP_002272706.1| PREDICTED: uncharacterized protein LOC100260493 [Vitis vinifera]
          Length = 253

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 58/109 (53%), Positives = 65/109 (59%), Gaps = 10/109 (9%)
 Frame = +1

Query: 1   AEDAAILAAHAKHGNKWATIARLLSGRTDNAIKNHWNSTLRRRGLSQSQIAPSTSNSLPS 180
           AEDA I+ AHA HGNKWATIAR+L GRTDNAIKNHWNSTLRRR + +   A S SNS   
Sbjct: 69  AEDAVIVQAHAVHGNKWATIARILPGRTDNAIKNHWNSTLRRRRVGELSSASSESNSAMK 128

Query: 181 PPRSSVPETPENSESASKRQ----------CRREDEVDETGLCLSLSPP 297
            P      + E S+S  KRQ          C R     ET   L+LSPP
Sbjct: 129 RPSFDATVSSE-SDSGLKRQLVGASPEHNSCDRVKAEPETS--LTLSPP 174


>ref|XP_002311241.1| predicted protein [Populus trichocarpa] gi|222851061|gb|EEE88608.1|
           predicted protein [Populus trichocarpa]
          Length = 259

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 60/110 (54%), Positives = 66/110 (60%), Gaps = 11/110 (10%)
 Frame = +1

Query: 1   AEDAAILAAHAKHGNKWATIARLLSGRTDNAIKNHWNSTLRRRGLSQSQIAPSTSNSLPS 180
           AEDA I+ AHA HGNKWATIARLL GRTDNAIKNHWNSTLRR+  S S  A S SNS+  
Sbjct: 70  AEDAKIVQAHAIHGNKWATIARLLPGRTDNAIKNHWNSTLRRKRGSVSS-ASSESNSVFK 128

Query: 181 PPRSSVPETPEN-SESASKRQCRREDE----------VDETGLCLSLSPP 297
                V    E+ S+S SKRQC               VD     L+LSPP
Sbjct: 129 RSTLEVSVVSESESDSGSKRQCLHASPGHNSVNGDVGVDGPETSLTLSPP 178


>ref|XP_002528315.1| r2r3-myb transcription factor, putative [Ricinus communis]
           gi|223532270|gb|EEF34073.1| r2r3-myb transcription
           factor, putative [Ricinus communis]
          Length = 264

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 58/116 (50%), Positives = 69/116 (59%), Gaps = 18/116 (15%)
 Frame = +1

Query: 4   EDAAILAAHAKHGNKWATIARLLSGRTDNAIKNHWNSTLRRRGLSQSQIAPSTSNSL--- 174
           EDA I+ AHA HGNKWATIARLL GRTDNAIKNHWNSTLRR+ +++   A S SNS    
Sbjct: 75  EDAVIVQAHAVHGNKWATIARLLPGRTDNAIKNHWNSTLRRKRIAEFSSASSESNSAIKR 134

Query: 175 --PSPPRSSVPETPENSESASKRQCR-----RED--------EVDETGLCLSLSPP 297
                   S  E+  +S +A+KRQC       ED        +V E    L+LSPP
Sbjct: 135 LSLDGDSESDSESGSDSAAAAKRQCLGGSGCTEDSSFNGGDAKVVEPETLLTLSPP 190


>ref|XP_003518439.1| PREDICTED: myb-related protein A [Glycine max]
          Length = 247

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 54/104 (51%), Positives = 66/104 (63%), Gaps = 5/104 (4%)
 Frame = +1

Query: 1   AEDAAILAAHAKHGNKWATIARLLSGRTDNAIKNHWNSTLRRRGLSQSQIAPSTSNSLPS 180
           AED  I+ AHA HGNKWATI+RLL GRTDNAIKNHWNSTLRRR   +S  + S+S S P+
Sbjct: 67  AEDKMIIKAHAIHGNKWATISRLLPGRTDNAIKNHWNSTLRRRRAVES--SSSSSASPPA 124

Query: 181 PPRSSVPETPENSESASKRQCRREDEVDETGL-----CLSLSPP 297
              SS+ +T        K+QC  ++  +E  L      LSL PP
Sbjct: 125 KRHSSLFDTLH----PFKKQCIEKENEEERVLSPVTTSLSLFPP 164


>dbj|BAB91464.1| Myb transcription factor [Chamaecyparis pisifera]
          Length = 267

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 40/47 (85%), Positives = 42/47 (89%)
 Frame = +1

Query: 1   AEDAAILAAHAKHGNKWATIARLLSGRTDNAIKNHWNSTLRRRGLSQ 141
           AEDAAI+ AH +HGNKWATIARLL GRTDNAIKNHWNSTLRRR L Q
Sbjct: 9   AEDAAIIEAHLRHGNKWATIARLLPGRTDNAIKNHWNSTLRRRSLQQ 55


Top