BLASTX nr result

ID: Dioscorea21_contig00028311 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028311
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270206.1| PREDICTED: WD repeat-containing protein 44-l...   135   5e-30
emb|CAN65559.1| hypothetical protein VITISV_034983 [Vitis vinifera]   135   5e-30
ref|XP_002527721.1| WD-repeat protein, putative [Ricinus communi...   132   2e-29
ref|XP_002309053.1| predicted protein [Populus trichocarpa] gi|2...   132   2e-29
ref|XP_003522207.1| PREDICTED: uncharacterized protein LOC100779...   129   3e-28

>ref|XP_002270206.1| PREDICTED: WD repeat-containing protein 44-like [Vitis vinifera]
          Length = 912

 Score =  135 bits (339), Expect = 5e-30
 Identities = 78/158 (49%), Positives = 91/158 (57%), Gaps = 3/158 (1%)
 Frame = -1

Query: 465 AHQGSIWTIKFSPDARYLASAGEDRVIHIWQTXXXXXXXXXXXXXXXXXXXXSMAACGSA 286
           AH+GSIWTI+FS D RYLASAGEDR+IH+W+                      MA  GS+
Sbjct: 403 AHEGSIWTIRFSSDGRYLASAGEDRIIHVWEVQECEATPWKPPDELNSTPLHPMAL-GSS 461

Query: 285 DSQAALLGTQTLKRSTRKGLGPFASGRR---SLPENIVMPETVFSLFDKPFCSFHGHLDD 115
           D        +T   + RK  G  +S  R   S+P+ I MPETVFSL + P CSF GHLDD
Sbjct: 462 DRPPL---PETPISAERKKKGKMSSSSRKGHSIPDYIHMPETVFSLLEIPVCSFKGHLDD 518

Query: 114 VXXXXXXXXXXXXXXSMDKTVRLWDMETKACLKLFAHN 1
           V              SMDKTVRLWDMETK+CLKLFAHN
Sbjct: 519 VLDLSWSGSQLLLSSSMDKTVRLWDMETKSCLKLFAHN 556


>emb|CAN65559.1| hypothetical protein VITISV_034983 [Vitis vinifera]
          Length = 1068

 Score =  135 bits (339), Expect = 5e-30
 Identities = 78/158 (49%), Positives = 91/158 (57%), Gaps = 3/158 (1%)
 Frame = -1

Query: 465 AHQGSIWTIKFSPDARYLASAGEDRVIHIWQTXXXXXXXXXXXXXXXXXXXXSMAACGSA 286
           AH+GSIWTI+FS D RYLASAGEDR+IH+W+                      MA  GS+
Sbjct: 361 AHEGSIWTIRFSSDGRYLASAGEDRIIHVWEVQECEATPWKPPDELNSTPLHPMAL-GSS 419

Query: 285 DSQAALLGTQTLKRSTRKGLGPFASGRR---SLPENIVMPETVFSLFDKPFCSFHGHLDD 115
           D        +T   + RK  G  +S  R   S+P+ I MPETVFSL + P CSF GHLDD
Sbjct: 420 DRPPL---PETPISAERKKKGKMSSSSRKGHSIPDYIHMPETVFSLLEIPVCSFKGHLDD 476

Query: 114 VXXXXXXXXXXXXXXSMDKTVRLWDMETKACLKLFAHN 1
           V              SMDKTVRLWDMETK+CLKLFAHN
Sbjct: 477 VLDLSWSGSQLLLSSSMDKTVRLWDMETKSCLKLFAHN 514


>ref|XP_002527721.1| WD-repeat protein, putative [Ricinus communis]
           gi|223532862|gb|EEF34634.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 939

 Score =  132 bits (333), Expect = 2e-29
 Identities = 77/157 (49%), Positives = 89/157 (56%), Gaps = 2/157 (1%)
 Frame = -1

Query: 465 AHQGSIWTIKFSPDARYLASAGEDRVIHIWQTXXXXXXXXXXXXXXXXXXXXSMAACGSA 286
           AHQGSIWTIKFSPDAR+LAS GEDR IHIW+                     +    G  
Sbjct: 406 AHQGSIWTIKFSPDARFLASGGEDRTIHIWEVQECEIMSLNEGTLTPLHPFSTTPCLGEV 465

Query: 285 DSQAALLGTQTLKRSTRKGLGPFASGRRS--LPENIVMPETVFSLFDKPFCSFHGHLDDV 112
            S A+       K+  +KG    +S R+   +PE + + ETVFSL DKP CSF GHLDDV
Sbjct: 466 PSLASE------KKKKKKG----SSSRKCNPIPEYVHVSETVFSLSDKPVCSFTGHLDDV 515

Query: 111 XXXXXXXXXXXXXXSMDKTVRLWDMETKACLKLFAHN 1
                         SMDKTVRLWDMETK+CLKLFAHN
Sbjct: 516 LDLSWSRSQLLLSSSMDKTVRLWDMETKSCLKLFAHN 552


>ref|XP_002309053.1| predicted protein [Populus trichocarpa] gi|222855029|gb|EEE92576.1|
           predicted protein [Populus trichocarpa]
          Length = 939

 Score =  132 bits (333), Expect = 2e-29
 Identities = 77/157 (49%), Positives = 90/157 (57%), Gaps = 2/157 (1%)
 Frame = -1

Query: 465 AHQGSIWTIKFSPDARYLASAGEDRVIHIWQTXXXXXXXXXXXXXXXXXXXXSMAACGSA 286
           AH+GSIWTI+FS DAR+LAS GEDR+IHIW+                       + C S 
Sbjct: 408 AHRGSIWTIRFSSDARFLASGGEDRIIHIWEVQECEVMSLHDGNLTPLHP----SLCSST 463

Query: 285 DSQAALLGTQTLKRSTRKGLGPFASGRRS--LPENIVMPETVFSLFDKPFCSFHGHLDDV 112
            S    LG  T   S RK     +S R+   +PE + +PETVFSL +KP CSF GHLDDV
Sbjct: 464 PS----LGEVTPMSSERKKKWKASSSRKGNPIPEYVHVPETVFSLSEKPVCSFTGHLDDV 519

Query: 111 XXXXXXXXXXXXXXSMDKTVRLWDMETKACLKLFAHN 1
                         SMDKTVRLWDMETK+CLKLFAHN
Sbjct: 520 LDLSWSRSQLLLSSSMDKTVRLWDMETKSCLKLFAHN 556


>ref|XP_003522207.1| PREDICTED: uncharacterized protein LOC100779364 [Glycine max]
          Length = 894

 Score =  129 bits (323), Expect = 3e-28
 Identities = 72/156 (46%), Positives = 86/156 (55%), Gaps = 1/156 (0%)
 Frame = -1

Query: 465 AHQGSIWTIKFSPDARYLASAGEDRVIHIWQTXXXXXXXXXXXXXXXXXXXXSMAACGSA 286
           AH+G +WTI+FS D RYLASAGEDRVIH+W+                     S+ A  S 
Sbjct: 387 AHEGCVWTIRFSLDGRYLASAGEDRVIHVWEVQECEVMSLRPDEGSLTPLHPSLLASSSE 446

Query: 285 DSQAALLGTQTLKRSTRKGLGPFASGR-RSLPENIVMPETVFSLFDKPFCSFHGHLDDVX 109
               +         S +K  G F S R  ++PE + +PETVFSL DKP CSF GHLDDV 
Sbjct: 447 TPSLS---------SEKKKKGKFGSKRGTAIPEYVHVPETVFSLSDKPHCSFRGHLDDVL 497

Query: 108 XXXXXXXXXXXXXSMDKTVRLWDMETKACLKLFAHN 1
                        SMDKTVRLWD+ETK CL +FAHN
Sbjct: 498 DLSWSKSQLLLSSSMDKTVRLWDLETKTCLNMFAHN 533


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