BLASTX nr result

ID: Dioscorea21_contig00028304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028304
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19025.3| unnamed protein product [Vitis vinifera]              166   3e-39
gb|ACD56617.1| hypothetical binding protein [Gossypioides kirkii]     157   1e-36
ref|XP_003567314.1| PREDICTED: sister chromatid cohesion protein...   154   7e-36
dbj|BAK07622.1| predicted protein [Hordeum vulgare subsp. vulgare]    149   4e-34
ref|XP_002284482.2| PREDICTED: sister chromatid cohesion protein...   139   4e-31

>emb|CBI19025.3| unnamed protein product [Vitis vinifera]
          Length = 1450

 Score =  166 bits (419), Expect = 3e-39
 Identities = 84/182 (46%), Positives = 121/182 (66%)
 Frame = -1

Query: 555  KCLLILFLEETVVPTEKFLQILAKVGRHVSINMSDIYPFLERVCLEGTRLESKFAVSAVA 376
            K   +L  +E +   EK +Q+L K G H+SI +SDIYP LE++CLEG+R +SKFAVSA+A
Sbjct: 651  KLFQMLLFKEDIPFQEKLIQVLGKAGPHISIKLSDIYPSLEKICLEGSRAQSKFAVSAIA 710

Query: 375  SLTDSSDKQTFSNLCTKLVSSLLDGSNIPTLLQSLGCISKYSSSTFELYEDQIRDFIFQK 196
            +L  +S++  FS LC  LV SL  G NIPT+LQSLGC++++S S FE  + +I  +I + 
Sbjct: 711  ALVGTSEQFVFSELCKALVDSLHGGQNIPTVLQSLGCMAQHSVSAFEARDKEITSYINET 770

Query: 195  LFYSMEVDSLEQTSYAGDSVCSLSCKLKVYGIKALVKSFLPNHVAQARHQLKAFLDFISN 16
             F    +D+L   S+   S CS SCKLK+Y +KALV+SFLP+     + Q+   LD +S 
Sbjct: 771  FFQVEPLDNL--ASFDETSECSSSCKLKIYALKALVRSFLPHRGTHVKRQINDLLDIMSE 828

Query: 15   IV 10
            ++
Sbjct: 829  ML 830


>gb|ACD56617.1| hypothetical binding protein [Gossypioides kirkii]
          Length = 866

 Score =  157 bits (397), Expect = 1e-36
 Identities = 80/180 (44%), Positives = 117/180 (65%)
 Frame = -1

Query: 546  LILFLEETVVPTEKFLQILAKVGRHVSINMSDIYPFLERVCLEGTRLESKFAVSAVASLT 367
            L L  E+  +  +K +Q+L K G H+S+   D YP L+R+CLEG R +SK+AVSA+ASL 
Sbjct: 663  LRLLFEKKYLIHDKIIQVLVKAGPHISVKFCDFYPVLKRICLEGPRPQSKYAVSAIASLI 722

Query: 366  DSSDKQTFSNLCTKLVSSLLDGSNIPTLLQSLGCISKYSSSTFELYEDQIRDFIFQKLFY 187
            D S+   FS LC +LV SL  G N  T+LQSLGCI++YS STFE ++ +I  ++++ +F 
Sbjct: 723  DVSEPYVFSELCEELVDSLHRGWNTATVLQSLGCIAQYSVSTFEHHDKEITQYVYKNIF- 781

Query: 186  SMEVDSLEQTSYAGDSVCSLSCKLKVYGIKALVKSFLPNHVAQARHQLKAFLDFISNIVQ 7
              +  SL+  S   DS    +CKLK+YG+K LVKSFLP+  +Q   Q+ + L  +  ++Q
Sbjct: 782  --QAKSLDDPSVIEDSSSCTTCKLKIYGLKMLVKSFLPHRGSQISRQINSLLGTLLKMLQ 839


>ref|XP_003567314.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog A-like
            [Brachypodium distachyon]
          Length = 1399

 Score =  154 bits (390), Expect = 7e-36
 Identities = 92/183 (50%), Positives = 122/183 (66%), Gaps = 7/183 (3%)
 Frame = -1

Query: 549  LLILFLEETVVPTEKFLQILAKVGR---HVSINMS-DIYPFLERVCLEGTRLESKFAVSA 382
            LL LF EE+V+  EK LQ+LA + +   H+S+N+S D+Y  LE+ C+EGTR ESK+A+SA
Sbjct: 649  LLKLFSEESVLINEKTLQMLAYLSKSVCHLSVNLSSDVYMLLEQKCIEGTRAESKYAISA 708

Query: 381  VASLTDSSDKQTFSNLCTKLVSSLLDGSNIPTLLQSLGCISKYSSSTFELYEDQIRDFIF 202
            +ASL  S D + F+ LC K+V  L D  N+PTLLQSLG I ++S   + LY+DQI  F+ 
Sbjct: 709  IASLIQSPDDKKFAKLCEKVVGGLHDNLNVPTLLQSLGLILEHSPCMYMLYDDQIISFV- 767

Query: 201  QKLFYSME-VDSLEQTSYAGDSVCSLSCKLKVYGIKALVKSFLPNHVAQAR--HQLKAFL 31
            Q +F S E V +   +S   DS CS SCKLK+Y +KALVKS+LP   A+ R  H  K  L
Sbjct: 768  QHVFVSPEFVSTPGLSSLDEDSTCSFSCKLKIYCLKALVKSYLPRTTARDRIEHFFKMLL 827

Query: 30   DFI 22
            D I
Sbjct: 828  DII 830


>dbj|BAK07622.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1300

 Score =  149 bits (375), Expect = 4e-34
 Identities = 91/183 (49%), Positives = 122/183 (66%), Gaps = 7/183 (3%)
 Frame = -1

Query: 549  LLILFLEETVVPTEKFLQILAKVGR---HVSINMS-DIYPFLERVCLEGTRLESKFAVSA 382
            LL LF E++V+  EK LQ+LA + +   ++SIN S D+Y  LE+ C+EGTR ESK+A+SA
Sbjct: 647  LLKLFSEDSVLINEKSLQMLAYLAKSPCNLSINFSSDVYLLLEQKCIEGTRAESKYAISA 706

Query: 381  VASLTDSSDKQTFSNLCTKLVSSLLDGSNIPTLLQSLGCISKYSSSTFELYEDQIRDFIF 202
            +ASL  S D + F+ LC K+V  L D  NIPTLLQSLG I +YS S +  Y+DQ  +F+ 
Sbjct: 707  IASLIQSPDDKKFAKLCKKVVVGLHDNHNIPTLLQSLGLILEYSPSMYTSYDDQFINFV- 765

Query: 201  QKLFYSMEVDSLEQTSYAGD-SVCSLSCKLKVYGIKALVKSFLPNHVAQARHQ--LKAFL 31
            Q++F S E  S  + S + + S CS SCKLK+Y +KALVKS LP   A+ R +  LK  L
Sbjct: 766  QRVFVSPEFVSTPELSPSNENSACSFSCKLKIYCLKALVKSCLPTTTARDRIENFLKMLL 825

Query: 30   DFI 22
            D I
Sbjct: 826  DII 828


>ref|XP_002284482.2| PREDICTED: sister chromatid cohesion protein PDS5 homolog A-like
            [Vitis vinifera]
          Length = 1305

 Score =  139 bits (349), Expect = 4e-31
 Identities = 73/182 (40%), Positives = 108/182 (59%)
 Frame = -1

Query: 555  KCLLILFLEETVVPTEKFLQILAKVGRHVSINMSDIYPFLERVCLEGTRLESKFAVSAVA 376
            K   +L  +E +   EK +Q+L K G H+SI +SDIYP LE++CLEG+R +SKFAVSA+A
Sbjct: 651  KLFQMLLFKEDIPFQEKLIQVLGKAGPHISIKLSDIYPSLEKICLEGSRAQSKFAVSAIA 710

Query: 375  SLTDSSDKQTFSNLCTKLVSSLLDGSNIPTLLQSLGCISKYSSSTFELYEDQIRDFIFQK 196
            +L  +S++  FS LC  LV SL  G NIPT+LQSLGC++++S S FE  + +I  +I + 
Sbjct: 711  ALVGTSEQFVFSELCKALVDSLHGGQNIPTVLQSLGCMAQHSVSAFEARDKEITSYINET 770

Query: 195  LFYSMEVDSLEQTSYAGDSVCSLSCKLKVYGIKALVKSFLPNHVAQARHQLKAFLDFISN 16
             F                         ++Y +KALV+SFLP+     + Q+   LD +S 
Sbjct: 771  FF-------------------------QIYALKALVRSFLPHRGTHVKRQINDLLDIMSE 805

Query: 15   IV 10
            ++
Sbjct: 806  ML 807


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