BLASTX nr result

ID: Dioscorea21_contig00028295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028295
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACG28545.1| protein binding protein [Zea mays]                      74   1e-11
ref|NP_001137079.1| uncharacterized protein LOC100217252 [Zea ma...    74   1e-11
ref|XP_002445080.1| hypothetical protein SORBIDRAFT_07g003830 [S...    73   2e-11
gb|ACR36207.1| unknown [Zea mays] gi|413938264|gb|AFW72815.1| pu...    73   3e-11
gb|ACN36122.1| unknown [Zea mays] gi|413921263|gb|AFW61195.1| pu...    73   3e-11

>gb|ACG28545.1| protein binding protein [Zea mays]
          Length = 159

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 30/54 (55%), Positives = 37/54 (68%)
 Frame = -2

Query: 261 LEASDQVRELGNCNHVFHKECIDKWVENGHQTCPLCRSELLPHGNNITDGFGFG 100
           LEA+D+VR LGNC H FH+ CID+W++ G  TCPLCRS+LLP         G G
Sbjct: 100 LEAADEVRRLGNCAHAFHRACIDRWIDLGRATCPLCRSDLLPRAPGWASRLGLG 153


>ref|NP_001137079.1| uncharacterized protein LOC100217252 [Zea mays]
           gi|194698258|gb|ACF83213.1| unknown [Zea mays]
           gi|413923455|gb|AFW63387.1| putative RING zinc finger
           domain superfamily protein [Zea mays]
          Length = 160

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 30/54 (55%), Positives = 37/54 (68%)
 Frame = -2

Query: 261 LEASDQVRELGNCNHVFHKECIDKWVENGHQTCPLCRSELLPHGNNITDGFGFG 100
           LEA+D+VR LGNC H FH+ CID+W++ G  TCPLCRS+LLP         G G
Sbjct: 101 LEAADEVRRLGNCAHAFHRACIDRWIDLGRATCPLCRSDLLPRAPGWASRLGLG 154


>ref|XP_002445080.1| hypothetical protein SORBIDRAFT_07g003830 [Sorghum bicolor]
           gi|241941430|gb|EES14575.1| hypothetical protein
           SORBIDRAFT_07g003830 [Sorghum bicolor]
          Length = 189

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 35/60 (58%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
 Frame = -2

Query: 261 LEASDQVRELGNCNHVFHKECIDKWVENGHQTCPLCRSELLPHGNNITDGFGFG-FAKSP 85
           LEA  +VRELGNC H FHK CIDKWV+ G  TCPLCR+ LLP  ++   G   G  A SP
Sbjct: 127 LEARHRVRELGNCAHAFHKACIDKWVDKGQATCPLCRALLLPDPSSAGAGDAVGELASSP 186


>gb|ACR36207.1| unknown [Zea mays] gi|413938264|gb|AFW72815.1| putative RING zinc
           finger domain superfamily protein [Zea mays]
          Length = 154

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 30/54 (55%), Positives = 37/54 (68%)
 Frame = -2

Query: 261 LEASDQVRELGNCNHVFHKECIDKWVENGHQTCPLCRSELLPHGNNITDGFGFG 100
           LEA+D+VR LGNC H FH+ CID+W++ G  TCPLCRS+LLP         G G
Sbjct: 89  LEAADEVRRLGNCAHAFHRACIDRWIDLGRTTCPLCRSDLLPSPRGRAGLLGLG 142


>gb|ACN36122.1| unknown [Zea mays] gi|413921263|gb|AFW61195.1| putative RING zinc
           finger domain superfamily protein [Zea mays]
          Length = 189

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 34/54 (62%), Positives = 39/54 (72%)
 Frame = -2

Query: 261 LEASDQVRELGNCNHVFHKECIDKWVENGHQTCPLCRSELLPHGNNITDGFGFG 100
           L+A  +VRELGNC H FHK CIDKWV+ G  TCPLCR+ LLP G +  DG G G
Sbjct: 124 LQARHRVRELGNCAHAFHKACIDKWVDKGQATCPLCRAFLLP-GLSAGDGDGDG 176