BLASTX nr result

ID: Dioscorea21_contig00028284 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028284
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]    59   3e-07
emb|CAN66190.1| hypothetical protein VITISV_006048 [Vitis vinifera]    59   4e-07
gb|ABR67407.1| integrase [Cucumis melo subsp. melo]                    58   7e-07
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]              57   2e-06
emb|CAN79446.1| hypothetical protein VITISV_037463 [Vitis vinifera]    57   2e-06

>emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
          Length = 1183

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
 Frame = +1

Query: 1   VGYFLETKAYKLYNPSTCKVIISRDVVFHEDSRWDW-----GA--DIQGVPNVSIME--E 153
           +GY  ++K YKLYNP + K+I+SR+VVF E + W W     GA  +I     V+  E  +
Sbjct: 628 IGYCSQSKGYKLYNPVSGKIIVSRNVVFDEKASWTWRVSEDGALVEISSESEVAQSEDQQ 687

Query: 154 PEIQVEEASSSIRNEDISTLQRNSQDTQAEETPP 255
           P +Q+  + +   +     L  +S    +EETPP
Sbjct: 688 PSVQIPASPTPSHSPSSPNLSSSSSSQSSEETPP 721


>emb|CAN66190.1| hypothetical protein VITISV_006048 [Vitis vinifera]
          Length = 916

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/84 (38%), Positives = 52/84 (61%)
 Frame = +1

Query: 1   VGYFLETKAYKLYNPSTCKVIISRDVVFHEDSRWDWGADIQGVPNVSIMEEPEIQVEEAS 180
           +G   E+KAY+LY+P + ++I SRDVVF ED  WDWG   +    VS +E  +++ EEA+
Sbjct: 400 LGVSEESKAYRLYDPVSQRIITSRDVVFEEDKNWDWGKKYE-ESIVSELEWGDLE-EEAT 457

Query: 181 SSIRNEDISTLQRNSQDTQAEETP 252
               NE+ + +  N + +++E  P
Sbjct: 458 MFDDNEEGNEVDPNEEGSESESDP 481


>gb|ABR67407.1| integrase [Cucumis melo subsp. melo]
          Length = 1281

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 11/80 (13%)
 Frame = +1

Query: 1   VGYFLETKAYKLYNPSTCKVIISRDVVFHEDSRWDWGADIQGVP---NVSI--------M 147
           VGY   +KAY+LYNP + K+II+RDV+F ED  W+W  D+       +V+I        +
Sbjct: 683 VGYNENSKAYRLYNPVSRKIIINRDVIFSEDESWNWNDDVDEAKSPFHVNINENEVAQEL 742

Query: 148 EEPEIQVEEASSSIRNEDIS 207
           E+ +IQ  E+SSS  +   S
Sbjct: 743 EQAKIQAVESSSSSTSSSTS 762


>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
          Length = 1291

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
 Frame = +1

Query: 1   VGYFLETKAYKLYNPSTCKVIISRDVVFHEDSRWDWGA---DIQGVPNVSIMEEPEIQVE 171
           +GY   +K YKLYNP T K IISR++VF E+  WDW +   D    P+    E    + E
Sbjct: 662 IGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPEPTREE 721

Query: 172 EASSSIRNEDISTLQRNSQDTQAEETP 252
             S        S      +++ +E TP
Sbjct: 722 PPSEEPTTRPTSLTSSQIEESSSERTP 748


>emb|CAN79446.1| hypothetical protein VITISV_037463 [Vitis vinifera]
          Length = 1120

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/85 (34%), Positives = 49/85 (57%)
 Frame = +1

Query: 1   VGYFLETKAYKLYNPSTCKVIISRDVVFHEDSRWDWGADIQGVPNVSIMEEPEIQVEEAS 180
           +G   E+KAY+L++P+T ++I+SRDV F E+  W+WG   + V    ++ E  ++ EEA 
Sbjct: 565 LGVSHESKAYRLFDPATRRIIMSRDVSFEENKGWNWGRIAEEVKRDILVWENIVEGEEAF 624

Query: 181 SSIRNEDISTLQRNSQDTQAEETPP 255
                E +  ++    D +AE T P
Sbjct: 625 FESEEEVVEGIEAIVIDQEAETTTP 649


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