BLASTX nr result

ID: Dioscorea21_contig00028279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00028279
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68216.1| hypothetical protein VITISV_008346 [Vitis vinifera]    75   7e-12
ref|XP_002263486.2| PREDICTED: uncharacterized protein LOC100249...    74   9e-12
prf||1718313A tnp1 protein                                             74   1e-11
emb|CAA40554.1| TNP1 [Antirrhinum majus]                               74   1e-11
ref|XP_002448503.1| hypothetical protein SORBIDRAFT_06g028070 [S...    70   2e-10

>emb|CAN68216.1| hypothetical protein VITISV_008346 [Vitis vinifera]
          Length = 1253

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 32/77 (41%), Positives = 48/77 (62%)
 Frame = +1

Query: 124 TMQEKKSRGPTMYKDIWSQSEGRRIHIFVNNEGQPIKDNAIKLSTFLGTLARNGVYTPLN 303
           T ++ + RGPT+  D+W+  EG+ + +  N  GQP  D+A KL  FLGT+AR+G   PL 
Sbjct: 332 TKRKPRVRGPTLCLDVWNMPEGQHVVVETNEVGQPDGDSACKLGNFLGTIARDGNLAPLT 391

Query: 304 YDDWRLIPNDYKEGYVE 354
           Y DWR +P   K+  ++
Sbjct: 392 YXDWRAVPQAAKDNMLQ 408


>ref|XP_002263486.2| PREDICTED: uncharacterized protein LOC100249234 [Vitis vinifera]
          Length = 675

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 32/77 (41%), Positives = 48/77 (62%)
 Frame = +1

Query: 124 TMQEKKSRGPTMYKDIWSQSEGRRIHIFVNNEGQPIKDNAIKLSTFLGTLARNGVYTPLN 303
           T ++ + RGPT+  D+W+  EG+ + +  N  GQP  D+A KL  FLGT+AR+G   PL 
Sbjct: 356 TKRKPRVRGPTLCLDVWNMPEGQHVVVETNEVGQPDGDSACKLGNFLGTIARDGHLAPLT 415

Query: 304 YDDWRLIPNDYKEGYVE 354
           Y DWR +P   K+  ++
Sbjct: 416 YADWRAVPQAAKDNMLQ 432


>prf||1718313A tnp1 protein
          Length = 484

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 38/71 (53%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
 Frame = +1

Query: 133 EKKSRGPTMYKDIWSQSEGRRIHIFVNNEGQPIKD-NAIKLSTFLGTLARNGVYTPLNYD 309
           +KK RG T    IW Q    RI +  N  GQP  + N   L+ FLGT+ARNG Y PLNY 
Sbjct: 62  KKKRRGHTCMPKIWGQQPENRIVVSFNELGQPNDEKNTSTLAHFLGTIARNGRYCPLNYK 121

Query: 310 DWRLIPNDYKE 342
           DWRL+PN YKE
Sbjct: 122 DWRLMPNVYKE 132


>emb|CAA40554.1| TNP1 [Antirrhinum majus]
          Length = 484

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 38/71 (53%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
 Frame = +1

Query: 133 EKKSRGPTMYKDIWSQSEGRRIHIFVNNEGQPIKD-NAIKLSTFLGTLARNGVYTPLNYD 309
           +KK RG T    IW Q    RI +  N  GQP  + N   L+ FLGT+ARNG Y PLNY 
Sbjct: 62  KKKRRGHTCMPKIWGQQPENRIVVSFNELGQPNDEKNTSTLAHFLGTIARNGRYCPLNYK 121

Query: 310 DWRLIPNDYKE 342
           DWRL+PN YKE
Sbjct: 122 DWRLMPNVYKE 132


>ref|XP_002448503.1| hypothetical protein SORBIDRAFT_06g028070 [Sorghum bicolor]
           gi|241939686|gb|EES12831.1| hypothetical protein
           SORBIDRAFT_06g028070 [Sorghum bicolor]
          Length = 909

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 35/96 (36%), Positives = 57/96 (59%)
 Frame = +1

Query: 55  VWLATSVKSDKVQQQRVIKCKKQTMQEKKSRGPTMYKDIWSQSEGRRIHIFVNNEGQPIK 234
           V+L  SV S++ + Q   + K      ++ RG T+   +W+  +G RI + +N+ GQPI 
Sbjct: 595 VYLRDSVDSEEQEVQLASQRKG-----RRPRGLTLCLKVWTMHKGMRIPVSLNSSGQPIG 649

Query: 235 DNAIKLSTFLGTLARNGVYTPLNYDDWRLIPNDYKE 342
             A  L++FLG LAR+G+  PL Y +W+L+P   K+
Sbjct: 650 KEAATLTSFLGALARDGILAPLTYHNWKLVPEKNKD 685


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